RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 DPH3Q96FX2 82 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 CDKN2A-AS1Q9UH64 79 aa3.68□□□□□ -1.82
AFP-201ENST00000226359 VPS13BQ7Z7G8 4022 aa3.67□□□□□ -1.82
AFP-201ENST00000226359 LOC107984156A0A0G2JMH3 177 aa3.67□□□□□ -1.82
AFP-201ENST00000226359 OXTP01178 125 aa3.67□□□□□ -1.82
AFP-201ENST00000226359 XCL1P47992 114 aa3.67□□□□□ -1.82
AFP-201ENST00000226359 CNBPP62633 177 aaKnown RBP3.67□□□□□ -1.82
AFP-201ENST00000226359 COX6A2Q02221 97 aa3.67□□□□□ -1.82
AFP-201ENST00000226359 TEN1Q86WV5 123 aa3.67□□□□□ -1.82
AFP-201ENST00000226359 ARL17AQ8IVW1 177 aa3.67□□□□□ -1.82
AFP-201ENST00000226359 NDUFA12Q9UI09 145 aa3.67□□□□□ -1.82
AFP-201ENST00000226359 SCXQ7RTU7 201 aa3.66□□□□□ -1.82
AFP-201ENST00000226359 C9orf163Q8N9P6 203 aa3.66□□□□□ -1.82
AFP-201ENST00000226359 TRBV20-1A0A075B6N2 111 aa3.66□□□□□ -1.82
AFP-201ENST00000226359 A0A0J9YXY3 114 aa3.66□□□□□ -1.82
AFP-201ENST00000226359 CIRBPQ14011 172 aaKnown RBP3.66□□□□□ -1.82
AFP-201ENST00000226359 PCLOQ9Y6V0 5065 aa3.65□□□□□ -1.82
AFP-201ENST00000226359 LINC00959A0A1B0GUT2 108 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 COX7A2LO14548 114 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 NDUFA1O15239 70 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 TCL1BO95988 128 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 SCGB1C2P0DMR2 95 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 RPL37AP61513 92 aaKnown RBP3.65□□□□□ -1.83
AFP-201ENST00000226359 HIGD2BQ4VC39 106 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 KRTAP26-1Q6PEX3 210 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 NOTCH2NLQ7Z3S9 236 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 C7orf33Q8WU49 177 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 LINC00474Q9P2X8 69 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 DNAH8Q96JB1 4490 aa3.65□□□□□ -1.83
AFP-201ENST00000226359 GVQW2A0A096LPI5 108 aaPredicted RBP3.64□□□□□ -1.83
AFP-201ENST00000226359 SNCGO76070 127 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 SFTA2Q6UW10 78 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 Q8NBF4 154 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 TOMM7Q9P0U1 55 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 CCDC179H3BU77 68 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 TIMM17BO60830 172 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 IFITM1P13164 125 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 MEIG1Q5JSS6 88 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 Q6Q795 121 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 C5orf38Q86SI9 138 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 MUSTN1Q8IVN3 82 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 CIRBP-AS1Q8TBR5 109 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 COX7B2Q8TF08 81 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 COPS9Q8WXC6 57 aa3.64□□□□□ -1.83
AFP-201ENST00000226359 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
AFP-201ENST00000226359 SMIM20Q8N5G0 67 aa3.63□□□□□ -1.83
AFP-201ENST00000226359 Q8N9P0 234 aaPredicted RBP3.63□□□□□ -1.83
AFP-201ENST00000226359 SPANXDQ9BXN6 97 aa3.63□□□□□ -1.83
AFP-201ENST00000226359 SPANXCQ9NY87 97 aa3.63□□□□□ -1.83
AFP-201ENST00000226359 IGHV3OR16-9A0A0B4J2B5 98 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 IGKV2-24A0A0C4DH68 120 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 SLC25A20O43772 301 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 SPAG11BQ08648 103 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 SYCNQ0VAF6 134 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 ZNF625Q96I27 306 aaPredicted RBP3.62□□□□□ -1.83
AFP-201ENST00000226359 CAMK2N2Q96S95 79 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 DHRS4-AS1Q9P1J3 65 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 CFC1BP0CG36 223 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 CFC1P0CG37 223 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 NPC2P61916 151 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 SDIM1Q6ZPB5 146 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 SPACA4Q8TDM5 124 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 V9GYY9 64 aa3.62□□□□□ -1.83
AFP-201ENST00000226359 C9JAW5 83 aa3.61□□□□□ -1.83
AFP-201ENST00000226359 LITAFQ99732 161 aa3.61□□□□□ -1.83
AFP-201ENST00000226359 PRO1854Q9UHT4 67 aa3.61□□□□□ -1.83
AFP-201ENST00000226359 A0A0B4J2C4 111 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 LINC00158P58513 81 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 RPL18AQ02543 176 aaKnown RBP3.6□□□□□ -1.83
AFP-201ENST00000226359 ATXN8Q156A1 80 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 Q1RN00 199 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 TMEM126AQ9H061 195 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 A0A087WYN8 130 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 H7C2G1 150 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 Q8IZM0 81 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 DAND5Q8N907 189 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 LINC00308Q8TCZ7 52 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 PLAC8Q9NZF1 115 aa3.6□□□□□ -1.83
AFP-201ENST00000226359 CHTF8P0CG12 524 aa3.59□□□□□ -1.83
AFP-201ENST00000226359 CXCL5P42830 114 aa3.59□□□□□ -1.83
AFP-201ENST00000226359 A0A096LNI7 61 aa3.58□□□□□ -1.84
AFP-201ENST00000226359 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
AFP-201ENST00000226359 Q6ZRU5 148 aa3.58□□□□□ -1.84
AFP-201ENST00000226359 LINC01600Q96MT4 127 aa3.58□□□□□ -1.84
AFP-201ENST00000226359 PFN2P35080 140 aa3.58□□□□□ -1.84
AFP-201ENST00000226359 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
AFP-201ENST00000226359 LINC00526Q96FQ7 95 aa3.58□□□□□ -1.84
AFP-201ENST00000226359 IGLV7-46A0A075B6I9 117 aa3.57□□□□□ -1.84
AFP-201ENST00000226359 COX6CP09669 75 aa3.57□□□□□ -1.84
AFP-201ENST00000226359 C2orf82Q6UX34 121 aa3.57□□□□□ -1.84
AFP-201ENST00000226359 FAT1Q14517 4588 aa3.57□□□□□ -1.84
AFP-201ENST00000226359 TRBV30A0A0K0K1B3 111 aa3.56□□□□□ -1.84
AFP-201ENST00000226359 TEX49A0A1B0GTD5 131 aa3.56□□□□□ -1.84
AFP-201ENST00000226359 PANO1I0J062 215 aa3.56□□□□□ -1.84
AFP-201ENST00000226359 KIAA0087Q14695 138 aa3.56□□□□□ -1.84
AFP-201ENST00000226359 SOSTDC1Q6X4U4 206 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms