RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TENM3Q9P273 2699 aa14.25□□□□□ -0.13
SMARCD2-201ENST00000225742 IGLV1-50A0A075B6I6 118 aa14.23□□□□□ -0.13
SMARCD2-201ENST00000225742 SPRR1AP35321 89 aa14.22□□□□□ -0.13
SMARCD2-201ENST00000225742 CASC10Q5T4H9 136 aa14.22□□□□□ -0.13
SMARCD2-201ENST00000225742 SMIM20Q8N5G0 67 aa14.22□□□□□ -0.13
SMARCD2-201ENST00000225742 LOC107984640A0A0U1RRK4 108 aa14.22□□□□□ -0.13
SMARCD2-201ENST00000225742 Q6ZRX8 168 aa14.22□□□□□ -0.13
SMARCD2-201ENST00000225742 KRTAP4-16G5E9R7 235 aaPredicted RBP14.21□□□□□ -0.13
SMARCD2-201ENST00000225742 PRB2P02812 416 aaPredicted RBP14.2□□□□□ -0.14
SMARCD2-201ENST00000225742 ETDCA0A1B0GVM5 59 aa14.18□□□□□ -0.14
SMARCD2-201ENST00000225742 TMEM258P61165 79 aa14.18□□□□□ -0.14
SMARCD2-201ENST00000225742 Q8N377 158 aa14.18□□□□□ -0.14
SMARCD2-201ENST00000225742 IGLV5-48A0A075B6I7 105 aa14.18□□□□□ -0.14
SMARCD2-201ENST00000225742 A0A1B0GW54 56 aa14.18□□□□□ -0.14
SMARCD2-201ENST00000225742 STAB1Q9NY15 2570 aa14.17□□□□□ -0.14
SMARCD2-201ENST00000225742 TRAV7A0A075B6U4 112 aa14.16□□□□□ -0.14
SMARCD2-201ENST00000225742 FAM168BA1KXE4 195 aa14.15□□□□□ -0.14
SMARCD2-201ENST00000225742 PKD1L1Q8TDX9 2849 aa14.14□□□□□ -0.15
SMARCD2-201ENST00000225742 FBN1P35555 2871 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-201ENST00000225742 RPL37AP8A6NKH3 93 aa14.14□□□□□ -0.15
SMARCD2-201ENST00000225742 MRPL55Q7Z7F7 128 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-201ENST00000225742 KRTAP7-1Q8IUC3 87 aa14.13□□□□□ -0.15
SMARCD2-201ENST00000225742 MAST4O15021 2626 aa14.13□□□□□ -0.15
SMARCD2-201ENST00000225742 DEFB105AQ8NG35 78 aa14.13□□□□□ -0.15
SMARCD2-201ENST00000225742 Q9BRP9 147 aa14.13□□□□□ -0.15
SMARCD2-201ENST00000225742 CYSTM1Q9H1C7 97 aa14.11□□□□□ -0.15
SMARCD2-201ENST00000225742 ANK2Q01484 3957 aa14.11□□□□□ -0.15
SMARCD2-201ENST00000225742 RPS28P62857 69 aaKnown RBP14.1□□□□□ -0.15
SMARCD2-201ENST00000225742 NREPQ16612 68 aa14.1□□□□□ -0.15
SMARCD2-201ENST00000225742 FAM19A5Q7Z5A7 132 aaPredicted RBP14.08□□□□□ -0.15
SMARCD2-201ENST00000225742 J3KT08 172 aa14.07□□□□□ -0.16
SMARCD2-201ENST00000225742 FUSP35637 526 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMARCD2-201ENST00000225742 CNBPP62633 177 aaKnown RBP14.06□□□□□ -0.16
SMARCD2-201ENST00000225742 TNP2Q05952 138 aa14.06□□□□□ -0.16
SMARCD2-201ENST00000225742 REG3GQ6UW15 175 aa14.06□□□□□ -0.16
SMARCD2-201ENST00000225742 SCXQ7RTU7 201 aa14.05□□□□□ -0.16
SMARCD2-201ENST00000225742 FLNBO75369 2602 aaKnown RBP14.05□□□□□ -0.16
SMARCD2-201ENST00000225742 BAHCC1Q9P281 2608 aa14.04□□□□□ -0.16
SMARCD2-201ENST00000225742 C16orf90A8MZG2 172 aa14.02□□□□□ -0.16
SMARCD2-201ENST00000225742 C20orf197Q8N268 126 aa14.02□□□□□ -0.16
SMARCD2-201ENST00000225742 BPY2O14599 106 aa14.01□□□□□ -0.17
SMARCD2-201ENST00000225742 UBE2BP63146 152 aa14.01□□□□□ -0.17
SMARCD2-201ENST00000225742 C14orf177Q52M58 125 aa14.01□□□□□ -0.17
SMARCD2-201ENST00000225742 C1orf137Q5JT78 98 aa14.01□□□□□ -0.17
SMARCD2-201ENST00000225742 ST20-AS1Q8NBB2 130 aa14□□□□□ -0.17
SMARCD2-201ENST00000225742 DNAH1Q9P2D7 4330 aa14□□□□□ -0.17
SMARCD2-201ENST00000225742 IGKV4-1P06312 121 aa13.99□□□□□ -0.17
SMARCD2-201ENST00000225742 Q8NBF4 154 aa13.99□□□□□ -0.17
SMARCD2-201ENST00000225742 KRTAP1-5Q9BYS1 174 aa13.99□□□□□ -0.17
SMARCD2-201ENST00000225742 APLNQ9ULZ1 77 aa13.99□□□□□ -0.17
SMARCD2-201ENST00000225742 A0A1W2PNM2 257 aa13.98□□□□□ -0.17
SMARCD2-201ENST00000225742 C3orf84H3BNL1 204 aa13.98□□□□□ -0.17
SMARCD2-201ENST00000225742 UBE2DNLQ8IWF7 75 aa13.98□□□□□ -0.17
SMARCD2-201ENST00000225742 HUWE1Q7Z6Z7 4374 aaKnown RBP13.98□□□□□ -0.17
SMARCD2-201ENST00000225742 PSCAO43653 123 aa13.97□□□□□ -0.17
SMARCD2-201ENST00000225742 ERC2-IT1O76042 136 aa13.97□□□□□ -0.17
SMARCD2-201ENST00000225742 KLKP1Q107X0 134 aa13.97□□□□□ -0.17
SMARCD2-201ENST00000225742 DPH3Q96FX2 82 aa13.97□□□□□ -0.17
SMARCD2-201ENST00000225742 SPRR4Q96PI1 79 aa13.97□□□□□ -0.17
SMARCD2-201ENST00000225742 A0A096LNI7 61 aa13.96□□□□□ -0.17
SMARCD2-201ENST00000225742 NOTCH1P46531 2555 aa13.96□□□□□ -0.17
SMARCD2-201ENST00000225742 PKIGQ9Y2B9 76 aa13.94□□□□□ -0.18
SMARCD2-201ENST00000225742 F8WEM9 126 aa13.9□□□□□ -0.18
SMARCD2-201ENST00000225742 SMIM29Q86T20 159 aa13.9□□□□□ -0.18
SMARCD2-201ENST00000225742 SVIPQ8NHG7 77 aa13.9□□□□□ -0.18
SMARCD2-201ENST00000225742 B9D2Q9BPU9 175 aa13.9□□□□□ -0.18
SMARCD2-201ENST00000225742 A0A1W2PNN7 141 aa13.89□□□□□ -0.19
SMARCD2-201ENST00000225742 NDUFC1O43677 76 aa13.89□□□□□ -0.19
SMARCD2-201ENST00000225742 IGKV2-24A0A0C4DH68 120 aa13.88□□□□□ -0.19
SMARCD2-201ENST00000225742 H7BZZ5 65 aa13.88□□□□□ -0.19
SMARCD2-201ENST00000225742 Q8N9L7 120 aa13.88□□□□□ -0.19
SMARCD2-201ENST00000225742 COL6A5A8TX70 2615 aa13.87□□□□□ -0.19
SMARCD2-201ENST00000225742 FAM236DA0A1B0GTK5 79 aa13.86□□□□□ -0.19
SMARCD2-201ENST00000225742 FAM236CP0DP71 79 aa13.86□□□□□ -0.19
SMARCD2-201ENST00000225742 IGLV8-61A0A075B6I0 122 aa13.85□□□□□ -0.19
SMARCD2-201ENST00000225742 LINC00476Q8WZB0 136 aa13.84□□□□□ -0.19
SMARCD2-201ENST00000225742 H0Y9J4 135 aa13.83□□□□□ -0.2
SMARCD2-201ENST00000225742 OCR1Q9BZK8 76 aa13.83□□□□□ -0.2
SMARCD2-201ENST00000225742 NBEAL1Q6ZS30 2694 aa13.83□□□□□ -0.2
SMARCD2-201ENST00000225742 C9orf163Q8N9P6 203 aa13.8□□□□□ -0.2
SMARCD2-201ENST00000225742 SNURFQ9Y675 71 aa13.8□□□□□ -0.2
SMARCD2-201ENST00000225742 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.8□□□□□ -0.2
SMARCD2-201ENST00000225742 PRLHP81277 87 aa13.8□□□□□ -0.2
SMARCD2-201ENST00000225742 NUPR2A6NF83 97 aa13.79□□□□□ -0.2
SMARCD2-201ENST00000225742 TMEM254Q8TBM7 123 aa13.78□□□□□ -0.2
SMARCD2-201ENST00000225742 NBDYA0A0U1RRE5 68 aa13.78□□□□□ -0.2
SMARCD2-201ENST00000225742 IGFL1Q6UW32 110 aa13.78□□□□□ -0.2
SMARCD2-201ENST00000225742 LINC00474Q9P2X8 69 aa13.78□□□□□ -0.2
SMARCD2-201ENST00000225742 LRCOL1A6NCL2 159 aa13.77□□□□□ -0.21
SMARCD2-201ENST00000225742 SPRR1BP22528 89 aa13.76□□□□□ -0.21
SMARCD2-201ENST00000225742 HIGD2AQ9BW72 106 aa13.76□□□□□ -0.21
SMARCD2-201ENST00000225742 ATP5EP56381 51 aaPredicted RBP13.76□□□□□ -0.21
SMARCD2-201ENST00000225742 DSCR10P59022 87 aa13.75□□□□□ -0.21
SMARCD2-201ENST00000225742 SERP1Q9Y6X1 66 aa13.75□□□□□ -0.21
SMARCD2-201ENST00000225742 PHF5AQ7RTV0 110 aaKnown RBP13.74□□□□□ -0.21
SMARCD2-201ENST00000225742 UBE2AP49459 152 aa13.73□□□□□ -0.21
SMARCD2-201ENST00000225742 OXTP01178 125 aa13.72□□□□□ -0.21
SMARCD2-201ENST00000225742 CHTF8P0CG12 524 aa13.72□□□□□ -0.21
SMARCD2-201ENST00000225742 DYNC2H1Q8NCM8 4307 aaKnown RBP13.72□□□□□ -0.21
SMARCD2-201ENST00000225742 A0A0U1RQV1 116 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms