RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 VPS13BQ7Z7G8 4022 aa8.67□□□□□ -1.02
SEC61B-201ENST00000223641 RYR1P21817 5038 aa8.66□□□□□ -1.02
SEC61B-201ENST00000223641 BATFQ16520 125 aa8.66□□□□□ -1.02
SEC61B-201ENST00000223641 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.02
SEC61B-201ENST00000223641 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
SEC61B-201ENST00000223641 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
SEC61B-201ENST00000223641 BCE1O60756 84 aa8.64□□□□□ -1.03
SEC61B-201ENST00000223641 C6orf99Q4VX62 202 aa8.64□□□□□ -1.03
SEC61B-201ENST00000223641 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
SEC61B-201ENST00000223641 TRBV7-6A0A0J9YX20 115 aa8.63□□□□□ -1.03
SEC61B-201ENST00000223641 TSPAN13O95857 204 aa8.63□□□□□ -1.03
SEC61B-201ENST00000223641 DIRC1Q969H9 104 aa8.63□□□□□ -1.03
SEC61B-201ENST00000223641 H7C2G1 150 aa8.62□□□□□ -1.03
SEC61B-201ENST00000223641 KRTAP10-4P60372 401 aaPredicted RBP8.62□□□□□ -1.03
SEC61B-201ENST00000223641 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
SEC61B-201ENST00000223641 B5MCH6 92 aa8.61□□□□□ -1.03
SEC61B-201ENST00000223641 H0Y9J4 135 aa8.61□□□□□ -1.03
SEC61B-201ENST00000223641 C1orf137Q5JT78 98 aa8.61□□□□□ -1.03
SEC61B-201ENST00000223641 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
SEC61B-201ENST00000223641 TAX1BP3O14907 124 aa8.6□□□□□ -1.03
SEC61B-201ENST00000223641 ELOF1P60002 83 aaKnown RBP8.6□□□□□ -1.03
SEC61B-201ENST00000223641 Q1RN00 199 aa8.6□□□□□ -1.03
SEC61B-201ENST00000223641 ETDCA0A1B0GVM5 59 aa8.59□□□□□ -1.03
SEC61B-201ENST00000223641 TRIAP1O43715 76 aa8.59□□□□□ -1.03
SEC61B-201ENST00000223641 IGLV7-43P04211 117 aa8.59□□□□□ -1.03
SEC61B-201ENST00000223641 RPL37AP61513 92 aaKnown RBP8.59□□□□□ -1.03
SEC61B-201ENST00000223641 COL5A1-AS1Q5SY13 56 aa8.59□□□□□ -1.03
SEC61B-201ENST00000223641 Q6ZRX8 168 aa8.59□□□□□ -1.03
SEC61B-201ENST00000223641 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
SEC61B-201ENST00000223641 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
SEC61B-201ENST00000223641 ZNF861PO60384 105 aa8.57□□□□□ -1.04
SEC61B-201ENST00000223641 COX7BP24311 80 aa8.57□□□□□ -1.04
SEC61B-201ENST00000223641 VAMP3Q15836 100 aa8.57□□□□□ -1.04
SEC61B-201ENST00000223641 Q8N1X5 172 aa8.57□□□□□ -1.04
SEC61B-201ENST00000223641 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
SEC61B-201ENST00000223641 H0YGX0 51 aa8.56□□□□□ -1.04
SEC61B-201ENST00000223641 PRLHP81277 87 aa8.56□□□□□ -1.04
SEC61B-201ENST00000223641 Q9BRP9 147 aa8.56□□□□□ -1.04
SEC61B-201ENST00000223641 INAFM2P0DMQ5 153 aa8.55□□□□□ -1.04
SEC61B-201ENST00000223641 UBE2AP49459 152 aa8.55□□□□□ -1.04
SEC61B-201ENST00000223641 PLA2G1BP04054 148 aaKnown RBP8.54□□□□□ -1.04
SEC61B-201ENST00000223641 COX6CP09669 75 aa8.54□□□□□ -1.04
SEC61B-201ENST00000223641 PSMB2P49721 201 aa8.54□□□□□ -1.04
SEC61B-201ENST00000223641 Q5VSD8 79 aa8.54□□□□□ -1.04
SEC61B-201ENST00000223641 LINC00575Q6W349 94 aa8.54□□□□□ -1.04
SEC61B-201ENST00000223641 SMCR5Q8TEV8 140 aa8.54□□□□□ -1.04
SEC61B-201ENST00000223641 H3BUT2 72 aa8.53□□□□□ -1.04
SEC61B-201ENST00000223641 NAA38Q9BRA0 125 aaKnown RBP8.53□□□□□ -1.04
SEC61B-201ENST00000223641 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
SEC61B-201ENST00000223641 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
SEC61B-201ENST00000223641 SRRM2Q9UQ35 2752 aaKnown RBP8.52□□□□□ -1.05
SEC61B-201ENST00000223641 A0A1B0GX51 115 aa8.51□□□□□ -1.05
SEC61B-201ENST00000223641 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
SEC61B-201ENST00000223641 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
SEC61B-201ENST00000223641 ERC2-IT1O76042 136 aa8.5□□□□□ -1.05
SEC61B-201ENST00000223641 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
SEC61B-201ENST00000223641 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
SEC61B-201ENST00000223641 SCGB1C2P0DMR2 95 aa8.49□□□□□ -1.05
SEC61B-201ENST00000223641 CLEC2BQ92478 149 aa8.49□□□□□ -1.05
SEC61B-201ENST00000223641 hADV29S1A0JD25 119 aa8.48□□□□□ -1.05
SEC61B-201ENST00000223641 SLC25A20O43772 301 aa8.48□□□□□ -1.05
SEC61B-201ENST00000223641 LST1O00453 97 aa8.47□□□□□ -1.05
SEC61B-201ENST00000223641 LYRM7Q5U5X0 104 aa8.47□□□□□ -1.05
SEC61B-201ENST00000223641 HERC2O95714 4834 aa8.46□□□□□ -1.05
SEC61B-201ENST00000223641 TRBV20-1A0A075B6N2 111 aa8.46□□□□□ -1.06
SEC61B-201ENST00000223641 TCL1BO95988 128 aa8.46□□□□□ -1.06
SEC61B-201ENST00000223641 TRACP01848 142 aa8.45□□□□□ -1.06
SEC61B-201ENST00000223641 FABP2P12104 132 aa8.45□□□□□ -1.06
SEC61B-201ENST00000223641 SNCGO76070 127 aa8.44□□□□□ -1.06
SEC61B-201ENST00000223641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.44□□□□□ -1.06
SEC61B-201ENST00000223641 IGLV5-48A0A075B6I7 105 aa8.43□□□□□ -1.06
SEC61B-201ENST00000223641 LINC01547P58512 204 aaPredicted RBP8.43□□□□□ -1.06
SEC61B-201ENST00000223641 Q6ZQY7 126 aa8.43□□□□□ -1.06
SEC61B-201ENST00000223641 ST20-AS1Q8NBB2 130 aa8.43□□□□□ -1.06
SEC61B-201ENST00000223641 SPRR4Q96PI1 79 aa8.43□□□□□ -1.06
SEC61B-201ENST00000223641 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
SEC61B-201ENST00000223641 KRTAP1-4P0C5Y4 121 aa8.42□□□□□ -1.06
SEC61B-201ENST00000223641 SPRR1BP22528 89 aa8.42□□□□□ -1.06
SEC61B-201ENST00000223641 ATXN8Q156A1 80 aa8.42□□□□□ -1.06
SEC61B-201ENST00000223641 LINC00483Q53H64 154 aa8.41□□□□□ -1.06
SEC61B-201ENST00000223641 OCIAD2Q56VL3 154 aa8.41□□□□□ -1.06
SEC61B-201ENST00000223641 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
SEC61B-201ENST00000223641 SPCS1Q9Y6A9 102 aa8.4□□□□□ -1.06
SEC61B-201ENST00000223641 DNAL4O96015 105 aa8.39□□□□□ -1.07
SEC61B-201ENST00000223641 Q8N377 158 aa8.39□□□□□ -1.07
SEC61B-201ENST00000223641 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
SEC61B-201ENST00000223641 PPDPFLQ8WWR9 84 aa8.38□□□□□ -1.07
SEC61B-201ENST00000223641 H3BMG7 143 aa8.37□□□□□ -1.07
SEC61B-201ENST00000223641 K7EP34 96 aa8.37□□□□□ -1.07
SEC61B-201ENST00000223641 GAGE2AQ6NT46 116 aa8.37□□□□□ -1.07
SEC61B-201ENST00000223641 GHRHP01286 108 aa8.36□□□□□ -1.07
SEC61B-201ENST00000223641 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
SEC61B-201ENST00000223641 SMIM29Q86T20 159 aa8.36□□□□□ -1.07
SEC61B-201ENST00000223641 DEFB105AQ8NG35 78 aa8.36□□□□□ -1.07
SEC61B-201ENST00000223641 ORMDL1Q9P0S3 153 aa8.36□□□□□ -1.07
SEC61B-201ENST00000223641 H3BQ85 93 aa8.35□□□□□ -1.07
SEC61B-201ENST00000223641 ANAPC11Q9NYG5 84 aa8.35□□□□□ -1.07
SEC61B-201ENST00000223641 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.07
SEC61B-201ENST00000223641 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
SEC61B-201ENST00000223641 TMEM256-PLSCR3K7ERE1 68 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms