RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 IGLV6-57P01721 117 aa10.11□□□□□ -0.79
LIM2-201ENST00000221973 C1orf137Q5JT78 98 aa10.11□□□□□ -0.79
LIM2-201ENST00000221973 FXYD2P54710 66 aa10.1□□□□□ -0.79
LIM2-201ENST00000221973 CTAG1AP78358 180 aa10.09□□□□□ -0.79
LIM2-201ENST00000221973 REG3GQ6UW15 175 aa10.09□□□□□ -0.79
LIM2-201ENST00000221973 TMEM126AQ9H061 195 aa10.09□□□□□ -0.79
LIM2-201ENST00000221973 KCNQ1DNQ9H478 68 aa10.09□□□□□ -0.79
LIM2-201ENST00000221973 TRAV13-2A0A0B4J235 113 aa10.08□□□□□ -0.8
LIM2-201ENST00000221973 PRYO14603 147 aa10.08□□□□□ -0.8
LIM2-201ENST00000221973 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
LIM2-201ENST00000221973 TMEM238LA0A1B0GVL6 79 aa10.07□□□□□ -0.8
LIM2-201ENST00000221973 A6NJY4 79 aa10.07□□□□□ -0.8
LIM2-201ENST00000221973 BCE1O60756 84 aa10.07□□□□□ -0.8
LIM2-201ENST00000221973 CFC1BP0CG36 223 aa10.07□□□□□ -0.8
LIM2-201ENST00000221973 CFC1P0CG37 223 aa10.07□□□□□ -0.8
LIM2-201ENST00000221973 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
LIM2-201ENST00000221973 IGLV7-43P04211 117 aa10.04□□□□□ -0.8
LIM2-201ENST00000221973 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
LIM2-201ENST00000221973 HINT1P49773 126 aaPredicted RBP10.04□□□□□ -0.8
LIM2-201ENST00000221973 BVES-AS1Q5T3Y7 98 aa10.04□□□□□ -0.8
LIM2-201ENST00000221973 FAM19A1Q7Z5A9 133 aa10.04□□□□□ -0.8
LIM2-201ENST00000221973 CBY1Q9Y3M2 126 aa10.04□□□□□ -0.8
LIM2-201ENST00000221973 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
LIM2-201ENST00000221973 SPRR1AP35321 89 aa10.03□□□□□ -0.8
LIM2-201ENST00000221973 NHP2Q9NX24 153 aaKnown RBP10.03□□□□□ -0.8
LIM2-201ENST00000221973 ETDCA0A1B0GVM5 59 aa10.02□□□□□ -0.81
LIM2-201ENST00000221973 ZNF73O43830 326 aaPredicted RBP10.02□□□□□ -0.81
LIM2-201ENST00000221973 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
LIM2-201ENST00000221973 UBE2AP49459 152 aa10.02□□□□□ -0.81
LIM2-201ENST00000221973 M0R143 59 aa10.01□□□□□ -0.81
LIM2-201ENST00000221973 PRLHP81277 87 aa10.01□□□□□ -0.81
LIM2-201ENST00000221973 SMIM11BQ8TCY0 68 aa10.01□□□□□ -0.81
LIM2-201ENST00000221973 KRTAP4-16G5E9R7 235 aaPredicted RBP10□□□□□ -0.81
LIM2-201ENST00000221973 H7C2G1 150 aa10□□□□□ -0.81
LIM2-201ENST00000221973 K7ERJ3 54 aa10□□□□□ -0.81
LIM2-201ENST00000221973 C6orf99Q4VX62 202 aa10□□□□□ -0.81
LIM2-201ENST00000221973 DIRC1Q969H9 104 aa10□□□□□ -0.81
LIM2-201ENST00000221973 PRO1854Q9UHT4 67 aa10□□□□□ -0.81
LIM2-201ENST00000221973 TNXBP22105 4242 aa9.99□□□□□ -0.81
LIM2-201ENST00000221973 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
LIM2-201ENST00000221973 B5MCH6 92 aa9.98□□□□□ -0.81
LIM2-201ENST00000221973 ZNF861PO60384 105 aa9.98□□□□□ -0.81
LIM2-201ENST00000221973 A0A1B0GWB2 263 aa9.97□□□□□ -0.81
LIM2-201ENST00000221973 KRTAP13-1Q8IUC0 172 aa9.97□□□□□ -0.81
LIM2-201ENST00000221973 BATFQ16520 125 aa9.96□□□□□ -0.82
LIM2-201ENST00000221973 Q1RN00 199 aa9.96□□□□□ -0.82
LIM2-201ENST00000221973 PCP4L1A6NKN8 68 aa9.95□□□□□ -0.82
LIM2-201ENST00000221973 SPINK6Q6UWN8 80 aa9.95□□□□□ -0.82
LIM2-201ENST00000221973 HIGD2AQ9BW72 106 aa9.95□□□□□ -0.82
LIM2-201ENST00000221973 LRP2P98164 4655 aa9.95□□□□□ -0.82
LIM2-201ENST00000221973 H0Y9J4 135 aa9.94□□□□□ -0.82
LIM2-201ENST00000221973 COX7BP24311 80 aa9.94□□□□□ -0.82
LIM2-201ENST00000221973 Q6ZRX8 168 aa9.94□□□□□ -0.82
LIM2-201ENST00000221973 ELOF1P60002 83 aaKnown RBP9.92□□□□□ -0.82
LIM2-201ENST00000221973 Q9BRP9 147 aa9.92□□□□□ -0.82
LIM2-201ENST00000221973 TRBV7-6A0A0J9YX20 115 aa9.91□□□□□ -0.82
LIM2-201ENST00000221973 VAMP3Q15836 100 aa9.91□□□□□ -0.82
LIM2-201ENST00000221973 TSPAN13O95857 204 aa9.9□□□□□ -0.82
LIM2-201ENST00000221973 SMCR5Q8TEV8 140 aa9.9□□□□□ -0.82
LIM2-201ENST00000221973 ERC2-IT1O76042 136 aa9.88□□□□□ -0.83
LIM2-201ENST00000221973 PSMB2P49721 201 aa9.87□□□□□ -0.83
LIM2-201ENST00000221973 DHRS4-AS1Q9P1J3 65 aa9.87□□□□□ -0.83
LIM2-201ENST00000221973 TRIAP1O43715 76 aa9.86□□□□□ -0.83
LIM2-201ENST00000221973 SNHG12Q9BXW3 62 aa9.86□□□□□ -0.83
LIM2-201ENST00000221973 RNF213Q63HN8 5207 aa9.83□□□□□ -0.84
LIM2-201ENST00000221973 H0YGX0 51 aa9.83□□□□□ -0.84
LIM2-201ENST00000221973 SLC25A20O43772 301 aa9.83□□□□□ -0.84
LIM2-201ENST00000221973 LINC00575Q6W349 94 aa9.83□□□□□ -0.84
LIM2-201ENST00000221973 ST20-AS1Q8NBB2 130 aa9.82□□□□□ -0.84
LIM2-201ENST00000221973 NAA38Q9BRA0 125 aaKnown RBP9.82□□□□□ -0.84
LIM2-201ENST00000221973 COX6CP09669 75 aa9.81□□□□□ -0.84
LIM2-201ENST00000221973 LINC01600Q96MT4 127 aa9.81□□□□□ -0.84
LIM2-201ENST00000221973 SPRR4Q96PI1 79 aa9.81□□□□□ -0.84
LIM2-201ENST00000221973 ZNF706Q9Y5V0 76 aaPredicted RBP9.81□□□□□ -0.84
LIM2-201ENST00000221973 hADV29S1A0JD25 119 aa9.8□□□□□ -0.84
LIM2-201ENST00000221973 KRTAP1-4P0C5Y4 121 aa9.8□□□□□ -0.84
LIM2-201ENST00000221973 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
LIM2-201ENST00000221973 FAM218AQ96MZ4 157 aa9.8□□□□□ -0.84
LIM2-201ENST00000221973 ANAPC11Q9NYG5 84 aa9.8□□□□□ -0.84
LIM2-201ENST00000221973 GAGE2AQ6NT46 116 aa9.79□□□□□ -0.84
LIM2-201ENST00000221973 CLEC2BQ92478 149 aa9.79□□□□□ -0.84
LIM2-201ENST00000221973 TAX1BP3O14907 124 aa9.77□□□□□ -0.85
LIM2-201ENST00000221973 DEFB105AQ8NG35 78 aa9.77□□□□□ -0.85
LIM2-201ENST00000221973 COL5A1-AS1Q5SY13 56 aa9.76□□□□□ -0.85
LIM2-201ENST00000221973 C9orf118A6NHY6 69 aa9.75□□□□□ -0.85
LIM2-201ENST00000221973 H3BUT2 72 aa9.75□□□□□ -0.85
LIM2-201ENST00000221973 SNCGO76070 127 aa9.75□□□□□ -0.85
LIM2-201ENST00000221973 KRTAP10-8P60410 259 aa9.75□□□□□ -0.85
LIM2-201ENST00000221973 Q6ZQY7 126 aa9.75□□□□□ -0.85
LIM2-201ENST00000221973 PRR26Q8N8Z3 221 aa9.74□□□□□ -0.85
LIM2-201ENST00000221973 LINC00483Q53H64 154 aa9.73□□□□□ -0.85
LIM2-201ENST00000221973 A0A087X002 238 aa9.72□□□□□ -0.85
LIM2-201ENST00000221973 A0A1B0GX51 115 aa9.72□□□□□ -0.85
LIM2-201ENST00000221973 CRYGAP11844 174 aa9.72□□□□□ -0.85
LIM2-201ENST00000221973 FAM229BQ4G0N7 80 aa9.72□□□□□ -0.85
LIM2-201ENST00000221973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.72□□□□□ -0.85
LIM2-201ENST00000221973 LINC01547P58512 204 aaPredicted RBP9.71□□□□□ -0.86
LIM2-201ENST00000221973 IGLV5-48A0A075B6I7 105 aa9.7□□□□□ -0.86
LIM2-201ENST00000221973 TEX49A0A1B0GTD5 131 aa9.7□□□□□ -0.86
LIM2-201ENST00000221973 SPRR1BP22528 89 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms