RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 PtprsB0V2N1 1907 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Trav4-2A0A075B638 110 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Pla2g5P97391 137 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Gm15091B1AZM2 449 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Ca11O70354 328 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Sod1P08228 154 aaKnown RBP13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Hs3st3b1Q9QZS6 390 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 P01811 117 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Trav16d-dv11A0A075B617 117 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Efna2P52801 209 aa13.07□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Atp6v0bQ91V37 205 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Gm37388A0A0A6YY46 143 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Gm27021M0QWE2 156 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Pate2Q3UW31 111 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Trav7-2Q5R1I3 112 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 P01675 107 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 P01676 107 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 P01677 107 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 P01678 107 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Spink10Q8CAC8 162 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Susd3Q9D176 269 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 PpyP10601 100 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Samd5Q3V1H9 173 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Brwd1Q921C3 2304 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 QrfpQ8CE23 124 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Tmem42Q9CR22 157 aa13.06□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Igkv6-23A0A140T8N5 115 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Repin1Q5U4E2 545 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Prss41Q920S2 322 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Igkv15-103A0A140T8P3 115 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 KncnQ307W7 124 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Znf664Q4VA44 261 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Tmem91Q8C581 172 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Ighv3-8A0A075B5T0 131 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 P01667 111 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Vdac2Q60930 295 aaKnown RBP13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 P2ry6Q9ERK9 328 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Ighv7-2A0A0A6YX91 119 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Gm10521E9PZK0 135 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Prss57Q14B24 284 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Zdhhc16Q9ESG8 361 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Znf385cA2A5E6 429 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Iba57Q8CAK1 358 aaKnown RBP13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Gm10428J3QNV7 132 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 D930007J09RikQ9D2K6 131 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Prss8Q9ESD1 342 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Fgf16Q9ESL8 207 aa13.05□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Iglv3A0A0B4J1K5 122 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 H3BKT1 185 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Foxh1O88621 401 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Timm10bQ9WV96 100 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 P01736 120 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 SeboxP70368 190 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Tex48Q9DA81 110 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Igkv4-79A0A075B5L8 119 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Reg3dQ9QUS9 175 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Cd33Q63994 403 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 3100002H09RikQ9CXW6 140 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Thy1P01831 162 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 AdmP97297 184 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 PinlypQ9CQD7 212 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Gatd1Q8BFQ8 220 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 9330161L09RikQ9D253 136 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Zfp646Q6NV66 1788 aa13.04□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Lrcol1Q3URS3 161 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Itgbl1Q8VDV0 494 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Polr3kQ9CQZ7 108 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Tmem243B2RVB9 118 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Ca1P13634 261 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Mpv17l2Q8VIK2 200 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Obsl1D3YYU8 1804 aaKnown RBP13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 LeprotO89013 131 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 LtaP09225 202 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Q9DAZ5 108 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Smr2O09133 150 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 1700074P13RikQ9D9G7 251 aa13.03□□□□□ -0.32
Ubr3-201ENSMUST00000055758 BB014433Q8C5R5 389 aa13.02□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Cend1Q9JKC6 149 aa13.02□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Wfdc9Q3UW41 83 aa13.02□□□□□ -0.32
Ubr3-201ENSMUST00000055758 Tpsab1Q02844 273 aa13.02□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Chchd5Q9CQP3 110 aa13.02□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Trav14-2A0A075B694 121 aa13.02□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Ighv5-12-4A0A0A6YWG4 117 aa13.02□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Gm21974F6W3F3 119 aa13.02□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Iglc3P01845 104 aa13.02□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Lgals6O54891 301 aa13.02□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Fxyd7P59648 80 aa13.02□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Nrxn2E9Q7X7 1710 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Wnt2P21552 360 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Olfr211Q8VGH2 309 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Gm20517G3UVU6 152 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Rnf126Q91YL2 313 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 HampQ9EQ21 83 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 P01654 111 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 P01656 111 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 P03977 111 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Tmem167aQ9CR64 72 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Ear14F6YUX7 155 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 SptssbQ925E8 76 aa13.01□□□□□ -0.33
Ubr3-201ENSMUST00000055758 Rai1Q61818 1889 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms