RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Rnf217D3YYI7 515 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Klk4Q9Z0M1 255 aa11.6□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Trav6-1A0A075B5Z8 112 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 MlanaQ2TA50 113 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 HampQ9EQ21 83 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Ly6lH3BJG9 140 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Ttc9cQ810A3 171 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 D730048I06RikQ9CQB8 106 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Olfr748E9Q9Z0 307 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Crim1Q9JLL0 1037 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gemin7Q9CWY4 129 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Cox8bP48772 70 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 3100002H09RikQ9CXW6 140 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Fam53bQ8BGR5 422 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Rnf115Q9D0C1 305 aa11.59□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Gpx1P11352 201 aa11.58□□□□□ -0.55
Col5a1-201ENSMUST00000028280 Igkv4-58A0A0G2JGI6 119 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 MyofQ69ZN7 2048 aaKnown RBP11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Rp1l1Q8CGM2 1859 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Tcrg-C1A0A075B5Z0 172 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igkv13-84A0A140T8N3 115 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Lsm4Q9QXA5 137 aaKnown RBP11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Eid2bE9Q2Y0 151 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 P01634 136 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 SbpP15501 199 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ypel2Q65Z95 119 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ypel1Q9ESC7 118 aa11.58□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Vwa8Q8CC88 1905 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Trbv13-3A0A0B4J1H2 113 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ear14F6YUX7 155 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 LeprotO89013 131 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igkv4-59A0A0B4J1I8 117 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Q8VE95 218 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Slc25a39Q9D8K8 359 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Rbm3O89086 153 aaKnown RBP11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 P01680 129 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm20517G3UVU6 152 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Smim26Q3V460 107 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Rspo4Q8BJ73 228 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 SelenokQ9JLJ1 94 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Cd200r1lQ6XJV6 249 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Fgf16Q9ESL8 207 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ly6aP05533 134 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 MycbQ6P8Z1 170 aa11.57□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Klrd1O54707 179 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Olfr745Q7TRL9 328 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm20726G3UX18 150 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ankrd39Q9D2X0 183 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igkv4-54A0A0G2JES9 117 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igkv4-61A0A0G2JH00 117 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Tmem255bQ5FW56 369 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Pth2Q91W27 100 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 PinlypQ9CQD7 212 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 AdmP97297 184 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm11232Q5SPI8 295 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Rpl36aP83882 106 aaKnown RBP11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Fam168aQ8BGZ2 244 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Mrps11Q9DCA2 191 aaKnown RBP11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Shisal2aA2A9G7 189 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Lrcol1Q3URS3 161 aa11.56□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm37388A0A0A6YY46 143 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm21789J3QMZ1 123 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm21870J3QPN2 123 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm21883J3QPV3 123 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Egr1P08046 533 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gata1P17679 413 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Tet1Q3URK3 2007 aaKnown RBP11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 AgrnA2ASQ1 1950 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Prrc2aQ7TSC1 2158 aaKnown RBP11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Znf664Q4VA44 261 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Znf740Q6NZQ6 180 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Zpld1Q8BGZ8 415 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 1700013G24RikQ9DAC6 286 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igkv4-63A0A0G2JFU6 117 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igkv6-23A0A140T8N5 115 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 HelzQ6DFV5 1964 aaKnown RBP11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Zdhhc16Q9ESG8 361 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Sec16aA2AIX1 2377 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm15128A2ADW8 449 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Tmem256Q5F285 113 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gatd1Q8BFQ8 220 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Q8VC23 124 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Plekhb2Q9QZC7 221 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Plxna2P70207 1894 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Iglc3P01845 104 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Slc25a28Q8R0Z5 364 aa11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Mrpl32Q9DCI9 187 aaKnown RBP11.55□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Zfp951A0A087WRH0 451 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Igfbpl1Q80W15 270 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Srsf7Q8BL97 267 aaKnown RBP11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 E130218I03RikA0A0U1RNU5 63 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Thap8E9Q695 213 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Trav6d-4Q5R1I0 115 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 BB014433Q8C5R5 389 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Grem1O70326 184 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Ighv7-2A0A0A6YX91 119 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Fbxl7Q5BJ29 491 aa11.54□□□□□ -0.56
Col5a1-201ENSMUST00000028280 H2al1jA2BFR3 109 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Gm17334Q8C6U3 126 aa11.53□□□□□ -0.56
Col5a1-201ENSMUST00000028280 Sorl1O88307 2215 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 78.2 ms