RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 HTN3P15516 51 aa9.5□□□□□ -0.89
SCARB2-227ENST00000640957 C6orf223Q8N319 242 aa9.5□□□□□ -0.89
SCARB2-227ENST00000640957 LINC01547P58512 204 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-227ENST00000640957 A0A087WZ39 114 aa9.48□□□□□ -0.89
SCARB2-227ENST00000640957 TMEM256-PLSCR3K7ERE1 68 aa9.48□□□□□ -0.89
SCARB2-227ENST00000640957 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
SCARB2-227ENST00000640957 NDUFC2O95298 119 aa9.48□□□□□ -0.89
SCARB2-227ENST00000640957 FP248Q71RG6 208 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-227ENST00000640957 MRAPQ8TCY5 172 aa9.48□□□□□ -0.89
SCARB2-227ENST00000640957 Q6ZQY7 126 aa9.48□□□□□ -0.89
SCARB2-227ENST00000640957 MAST4O15021 2626 aa9.48□□□□□ -0.89
SCARB2-227ENST00000640957 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
SCARB2-227ENST00000640957 WIPF1O43516 503 aa9.47□□□□□ -0.89
SCARB2-227ENST00000640957 NOTCH1P46531 2555 aa9.47□□□□□ -0.89
SCARB2-227ENST00000640957 PDZD2O15018 2839 aa9.47□□□□□ -0.89
SCARB2-227ENST00000640957 Q6ZVQ6 151 aa9.46□□□□□ -0.89
SCARB2-227ENST00000640957 XAGE1AQ9HD64 81 aa9.46□□□□□ -0.89
SCARB2-227ENST00000640957 GYPEP15421 78 aa9.46□□□□□ -0.9
SCARB2-227ENST00000640957 HIVEP1P15822 2718 aa9.45□□□□□ -0.9
SCARB2-227ENST00000640957 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
SCARB2-227ENST00000640957 C10orf25Q5T742 122 aa9.45□□□□□ -0.9
SCARB2-227ENST00000640957 FAM19A3Q7Z5A8 133 aa9.45□□□□□ -0.9
SCARB2-227ENST00000640957 OTOGQ6ZRI0 2925 aa9.44□□□□□ -0.9
SCARB2-227ENST00000640957 FAM229BQ4G0N7 80 aa9.44□□□□□ -0.9
SCARB2-227ENST00000640957 LINC01006Q8NI28 216 aa9.44□□□□□ -0.9
SCARB2-227ENST00000640957 TENM1Q9UKZ4 2725 aa9.44□□□□□ -0.9
SCARB2-227ENST00000640957 GIG44P09565 113 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-227ENST00000640957 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
SCARB2-227ENST00000640957 PLAC8L1A1L4L8 177 aa9.42□□□□□ -0.9
SCARB2-227ENST00000640957 ANGP03950 147 aaKnown RBP9.42□□□□□ -0.9
SCARB2-227ENST00000640957 Q6ZQT0 140 aa9.42□□□□□ -0.9
SCARB2-227ENST00000640957 STAB1Q9NY15 2570 aa9.42□□□□□ -0.9
SCARB2-227ENST00000640957 TRBV7-6A0A0J9YX20 115 aa9.42□□□□□ -0.9
SCARB2-227ENST00000640957 LINC00482Q8N8I6 264 aa9.42□□□□□ -0.9
SCARB2-227ENST00000640957 SERP1Q9Y6X1 66 aa9.42□□□□□ -0.9
SCARB2-227ENST00000640957 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
SCARB2-227ENST00000640957 LY6G6DO95868 133 aa9.4□□□□□ -0.9
SCARB2-227ENST00000640957 PRO0628Q9UI54 55 aa9.4□□□□□ -0.9
SCARB2-227ENST00000640957 PKD1L1Q8TDX9 2849 aa9.4□□□□□ -0.9
SCARB2-227ENST00000640957 FSHBP01225 129 aa9.39□□□□□ -0.91
SCARB2-227ENST00000640957 IGHV4-28A0A0C4DH34 117 aa9.39□□□□□ -0.91
SCARB2-227ENST00000640957 LINC00575Q6W349 94 aa9.39□□□□□ -0.91
SCARB2-227ENST00000640957 BAHCC1Q9P281 2608 aa9.38□□□□□ -0.91
SCARB2-227ENST00000640957 BPY2O14599 106 aa9.38□□□□□ -0.91
SCARB2-227ENST00000640957 IL17DQ8TAD2 202 aa9.38□□□□□ -0.91
SCARB2-227ENST00000640957 CHCHD10Q8WYQ3 142 aaPredicted RBP9.37□□□□□ -0.91
SCARB2-227ENST00000640957 C16orf95Q9H693 158 aa9.37□□□□□ -0.91
SCARB2-227ENST00000640957 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
SCARB2-227ENST00000640957 PRR4Q16378 134 aa9.37□□□□□ -0.91
SCARB2-227ENST00000640957 CELA1Q9UNI1 258 aa9.37□□□□□ -0.91
SCARB2-227ENST00000640957 ATP5EP2Q5VTU8 51 aa9.36□□□□□ -0.91
SCARB2-227ENST00000640957 DEFB135Q30KP9 77 aa9.36□□□□□ -0.91
SCARB2-227ENST00000640957 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
SCARB2-227ENST00000640957 KRTAP1-3Q8IUG1 177 aa9.36□□□□□ -0.91
SCARB2-227ENST00000640957 MIFP14174 115 aa9.35□□□□□ -0.91
SCARB2-227ENST00000640957 DEFB105AQ8NG35 78 aa9.35□□□□□ -0.91
SCARB2-227ENST00000640957 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
SCARB2-227ENST00000640957 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
SCARB2-227ENST00000640957 NDUFC2-KCTD14E9PQ53 114 aa9.34□□□□□ -0.91
SCARB2-227ENST00000640957 Q8IZM0 81 aa9.34□□□□□ -0.91
SCARB2-227ENST00000640957 J3QKU1 62 aa9.34□□□□□ -0.91
SCARB2-227ENST00000640957 NREPQ16612 68 aa9.34□□□□□ -0.91
SCARB2-227ENST00000640957 ZNF561-AS1K7EIQ3 104 aa9.33□□□□□ -0.92
SCARB2-227ENST00000640957 KIAA0087Q14695 138 aa9.33□□□□□ -0.92
SCARB2-227ENST00000640957 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
SCARB2-227ENST00000640957 MUC7Q8TAX7 377 aa9.33□□□□□ -0.92
SCARB2-227ENST00000640957 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
SCARB2-227ENST00000640957 HIGD2AQ9BW72 106 aa9.32□□□□□ -0.92
SCARB2-227ENST00000640957 INAFM1C9JVW0 142 aa9.32□□□□□ -0.92
SCARB2-227ENST00000640957 KLKP1Q107X0 134 aa9.32□□□□□ -0.92
SCARB2-227ENST00000640957 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
SCARB2-227ENST00000640957 NSD1Q96L73 2696 aaPredicted RBP9.31□□□□□ -0.92
SCARB2-227ENST00000640957 REG3AQ06141 175 aa9.31□□□□□ -0.92
SCARB2-227ENST00000640957 FBN1P35555 2871 aaKnown RBP9.31□□□□□ -0.92
SCARB2-227ENST00000640957 COL6A5A8TX70 2615 aa9.31□□□□□ -0.92
SCARB2-227ENST00000640957 CYSRT1A8MQ03 144 aa9.3□□□□□ -0.92
SCARB2-227ENST00000640957 KLK12Q9UKR0 248 aa9.3□□□□□ -0.92
SCARB2-227ENST00000640957 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
SCARB2-227ENST00000640957 HIGD2BQ4VC39 106 aa9.3□□□□□ -0.92
SCARB2-227ENST00000640957 TRRAPQ9Y4A5 3859 aa9.29□□□□□ -0.92
SCARB2-227ENST00000640957 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
SCARB2-227ENST00000640957 IGLV1-51P01701 117 aa9.28□□□□□ -0.92
SCARB2-227ENST00000640957 TRBV7-4A0A0J9YYF1 115 aa9.27□□□□□ -0.93
SCARB2-227ENST00000640957 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
SCARB2-227ENST00000640957 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
SCARB2-227ENST00000640957 CMC4P56277 68 aaPredicted RBP9.25□□□□□ -0.93
SCARB2-227ENST00000640957 CSNK1G2-AS1Q8NCQ2 148 aa9.25□□□□□ -0.93
SCARB2-227ENST00000640957 PSPHP1O15172 72 aa9.24□□□□□ -0.93
SCARB2-227ENST00000640957 EPM2AB3EWF7 344 aa9.23□□□□□ -0.93
SCARB2-227ENST00000640957 LOC110117498A0A087WWA1 95 aa9.23□□□□□ -0.93
SCARB2-227ENST00000640957 DIRC1Q969H9 104 aa9.23□□□□□ -0.93
SCARB2-227ENST00000640957 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
SCARB2-227ENST00000640957 ZNF73O43830 326 aaPredicted RBP9.22□□□□□ -0.93
SCARB2-227ENST00000640957 PRO0255Q9UI72 69 aa9.22□□□□□ -0.93
SCARB2-227ENST00000640957 COX7BP24311 80 aa9.21□□□□□ -0.94
SCARB2-227ENST00000640957 KRTAP1-1Q07627 177 aa9.21□□□□□ -0.94
SCARB2-227ENST00000640957 KRTAP10-3P60369 221 aa9.2□□□□□ -0.94
SCARB2-227ENST00000640957 C19orf73Q9NVV2 129 aa9.2□□□□□ -0.94
SCARB2-227ENST00000640957 DEFB116Q30KQ4 102 aa9.2□□□□□ -0.94
SCARB2-227ENST00000640957 A0A0G2JQZ4 141 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms