RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 FAM236CP0DP71 79 aa8.28□□□□□ -1.08
PAX6-261ENST00000639943 PFN2P35080 140 aa8.28□□□□□ -1.08
PAX6-261ENST00000639943 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
PAX6-261ENST00000639943 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.09
PAX6-261ENST00000639943 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
PAX6-261ENST00000639943 PRO0461Q9UI25 63 aa8.27□□□□□ -1.09
PAX6-261ENST00000639943 TRIAP1O43715 76 aa8.26□□□□□ -1.09
PAX6-261ENST00000639943 COX6CP09669 75 aa8.26□□□□□ -1.09
PAX6-261ENST00000639943 PPDPFLQ8WWR9 84 aa8.26□□□□□ -1.09
PAX6-261ENST00000639943 HUWE1Q7Z6Z7 4374 aaKnown RBP8.26□□□□□ -1.09
PAX6-261ENST00000639943 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
PAX6-261ENST00000639943 COX17Q14061 63 aa8.25□□□□□ -1.09
PAX6-261ENST00000639943 SND1-IT1Q9HBX3 110 aa8.25□□□□□ -1.09
PAX6-261ENST00000639943 CCL18P55774 89 aa8.25□□□□□ -1.09
PAX6-261ENST00000639943 TRAV13-2A0A0B4J235 113 aa8.24□□□□□ -1.09
PAX6-261ENST00000639943 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
PAX6-261ENST00000639943 ATXN8Q156A1 80 aa8.24□□□□□ -1.09
PAX6-261ENST00000639943 C3orf22Q8N5N4 141 aa8.24□□□□□ -1.09
PAX6-261ENST00000639943 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
PAX6-261ENST00000639943 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
PAX6-261ENST00000639943 UQCRQO14949 82 aa8.23□□□□□ -1.09
PAX6-261ENST00000639943 CD164Q04900 197 aa8.22□□□□□ -1.09
PAX6-261ENST00000639943 DNAH10OSP0CZ25 163 aa8.22□□□□□ -1.09
PAX6-261ENST00000639943 LINC00526Q96FQ7 95 aa8.22□□□□□ -1.09
PAX6-261ENST00000639943 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.1
PAX6-261ENST00000639943 IGKV2D-28P01615 120 aa8.21□□□□□ -1.1
PAX6-261ENST00000639943 KRTAP26-1Q6PEX3 210 aa8.21□□□□□ -1.1
PAX6-261ENST00000639943 MUC7Q8TAX7 377 aa8.21□□□□□ -1.1
PAX6-261ENST00000639943 CARD19Q96LW7 228 aa8.21□□□□□ -1.1
PAX6-261ENST00000639943 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
PAX6-261ENST00000639943 DPH3Q96FX2 82 aa8.2□□□□□ -1.1
PAX6-261ENST00000639943 UNQ6190/PRO20217Q6UXQ8 127 aa8.2□□□□□ -1.1
PAX6-261ENST00000639943 B9D2Q9BPU9 175 aa8.2□□□□□ -1.1
PAX6-261ENST00000639943 LINC00588Q9Y4M8 146 aa8.2□□□□□ -1.1
PAX6-261ENST00000639943 LINC00337Q8N6G1 96 aa8.19□□□□□ -1.1
PAX6-261ENST00000639943 OXTP01178 125 aa8.19□□□□□ -1.1
PAX6-261ENST00000639943 C9orf116Q5BN46 136 aaPredicted RBP8.19□□□□□ -1.1
PAX6-261ENST00000639943 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
PAX6-261ENST00000639943 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
PAX6-261ENST00000639943 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
PAX6-261ENST00000639943 TMEM258P61165 79 aa8.18□□□□□ -1.1
PAX6-261ENST00000639943 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
PAX6-261ENST00000639943 LST1O00453 97 aa8.18□□□□□ -1.1
PAX6-261ENST00000639943 SLC25A20O43772 301 aa8.18□□□□□ -1.1
PAX6-261ENST00000639943 CLEC2BQ92478 149 aa8.18□□□□□ -1.1
PAX6-261ENST00000639943 RPL28P46779 137 aaKnown RBP8.17□□□□□ -1.1
PAX6-261ENST00000639943 TEN1Q86WV5 123 aa8.17□□□□□ -1.1
PAX6-261ENST00000639943 IGKV2D-24A0A075B6R9 120 aa8.17□□□□□ -1.1
PAX6-261ENST00000639943 NDUFC2O95298 119 aa8.17□□□□□ -1.1
PAX6-261ENST00000639943 DNAH9Q9NYC9 4486 aa8.16□□□□□ -1.1
PAX6-261ENST00000639943 TRBV10-2A0A0K0K1G8 114 aa8.16□□□□□ -1.1
PAX6-261ENST00000639943 SERTAD4-AS1Q5TG53 156 aa8.16□□□□□ -1.1
PAX6-261ENST00000639943 UPK3BQ9BT76 320 aa8.16□□□□□ -1.1
PAX6-261ENST00000639943 CRYGAP11844 174 aa8.15□□□□□ -1.1
PAX6-261ENST00000639943 HIGD2BQ4VC39 106 aa8.15□□□□□ -1.1
PAX6-261ENST00000639943 C15orf56Q8N910 161 aa8.15□□□□□ -1.1
PAX6-261ENST00000639943 ANKRD29Q8N6D5 301 aa8.15□□□□□ -1.11
PAX6-261ENST00000639943 SMIM11BQ8TCY0 68 aa8.15□□□□□ -1.11
PAX6-261ENST00000639943 C2orf48Q96LS8 159 aa8.15□□□□□ -1.11
PAX6-261ENST00000639943 LINC01600Q96MT4 127 aa8.15□□□□□ -1.11
PAX6-261ENST00000639943 CAMK2N2Q96S95 79 aa8.15□□□□□ -1.11
PAX6-261ENST00000639943 C6orf48Q9UBA6 75 aa8.15□□□□□ -1.11
PAX6-261ENST00000639943 Q9HAA7 133 aa8.14□□□□□ -1.11
PAX6-261ENST00000639943 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
PAX6-261ENST00000639943 PMAIP1Q13794 54 aa8.13□□□□□ -1.11
PAX6-261ENST00000639943 H3BT86 120 aa8.12□□□□□ -1.11
PAX6-261ENST00000639943 TRACP01848 142 aa8.12□□□□□ -1.11
PAX6-261ENST00000639943 RMI2Q96E14 147 aa8.12□□□□□ -1.11
PAX6-261ENST00000639943 H0YGX0 51 aa8.11□□□□□ -1.11
PAX6-261ENST00000639943 STAB2Q8WWQ8 2551 aa8.1□□□□□ -1.11
PAX6-261ENST00000639943 COL7A1Q02388 2944 aa8.1□□□□□ -1.11
PAX6-261ENST00000639943 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
PAX6-261ENST00000639943 Q6ZRU5 148 aa8.1□□□□□ -1.11
PAX6-261ENST00000639943 KRTAP21-3Q3LHN1 58 aa8.1□□□□□ -1.11
PAX6-261ENST00000639943 IMUPQ9GZP8 106 aa8.09□□□□□ -1.11
PAX6-261ENST00000639943 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.12
PAX6-261ENST00000639943 APLNQ9ULZ1 77 aa8.09□□□□□ -1.12
PAX6-261ENST00000639943 TRBV7-7A0A0K0K1E9 115 aa8.08□□□□□ -1.12
PAX6-261ENST00000639943 NCR3O14931 201 aa8.08□□□□□ -1.12
PAX6-261ENST00000639943 COX7CP15954 63 aa8.08□□□□□ -1.12
PAX6-261ENST00000639943 Q8NDZ9 215 aa8.08□□□□□ -1.12
PAX6-261ENST00000639943 SYCNQ0VAF6 134 aa8.08□□□□□ -1.12
PAX6-261ENST00000639943 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
PAX6-261ENST00000639943 NDUFC2-KCTD14E9PQ53 114 aa8.07□□□□□ -1.12
PAX6-261ENST00000639943 UBE2DNLQ8IWF7 75 aa8.06□□□□□ -1.12
PAX6-261ENST00000639943 XAGE1AQ9HD64 81 aa8.06□□□□□ -1.12
PAX6-261ENST00000639943 DYNC2H1Q8NCM8 4307 aaKnown RBP8.05□□□□□ -1.12
PAX6-261ENST00000639943 A0A0U1RQV1 116 aa8.05□□□□□ -1.12
PAX6-261ENST00000639943 USP17L23D6RBM5 183 aa8.05□□□□□ -1.12
PAX6-261ENST00000639943 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
PAX6-261ENST00000639943 A0A087WYN8 130 aa8.04□□□□□ -1.12
PAX6-261ENST00000639943 DNAL4O96015 105 aa8.04□□□□□ -1.12
PAX6-261ENST00000639943 BAALC-AS2P0C853 105 aa8.04□□□□□ -1.12
PAX6-261ENST00000639943 DNAH1Q9P2D7 4330 aa8.04□□□□□ -1.12
PAX6-261ENST00000639943 VPREB1P12018 145 aa8.04□□□□□ -1.12
PAX6-261ENST00000639943 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
PAX6-261ENST00000639943 TEX49A0A1B0GTD5 131 aa8.03□□□□□ -1.12
PAX6-261ENST00000639943 IGLV6-57P01721 117 aa8.03□□□□□ -1.12
PAX6-261ENST00000639943 CASC10Q5T4H9 136 aa8.03□□□□□ -1.12
PAX6-261ENST00000639943 LECT2O14960 151 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms