RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
PAX6-250ENST00000639054 MUSTN1Q8IVN3 82 aa7.67□□□□□ -1.18
PAX6-250ENST00000639054 FAT2Q9NYQ8 4349 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 A0A087WTM6 91 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 TMEM238LA0A1B0GVL6 79 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 RTL8CO15255 209 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 CIRBPQ14011 172 aaKnown RBP7.66□□□□□ -1.18
PAX6-250ENST00000639054 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 DNAH11Q96DT5 4516 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 TIMM17BO60830 172 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
PAX6-250ENST00000639054 TNP2Q05952 138 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 SFTA2Q6UW10 78 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 CARD19Q96LW7 228 aa7.66□□□□□ -1.18
PAX6-250ENST00000639054 SPANXDQ9BXN6 97 aa7.65□□□□□ -1.18
PAX6-250ENST00000639054 SPANXCQ9NY87 97 aa7.65□□□□□ -1.18
PAX6-250ENST00000639054 LINC01620Q4KN68 170 aa7.64□□□□□ -1.19
PAX6-250ENST00000639054 TRBV30A0A0K0K1B3 111 aa7.64□□□□□ -1.19
PAX6-250ENST00000639054 LINC00308Q8TCZ7 52 aa7.64□□□□□ -1.19
PAX6-250ENST00000639054 CDIP1Q9H305 208 aa7.64□□□□□ -1.19
PAX6-250ENST00000639054 Q8N814 137 aa7.63□□□□□ -1.19
PAX6-250ENST00000639054 PGPEP1Q9NXJ5 209 aa7.63□□□□□ -1.19
PAX6-250ENST00000639054 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
PAX6-250ENST00000639054 C14orf177Q52M58 125 aa7.62□□□□□ -1.19
PAX6-250ENST00000639054 Q6ZRP5 223 aa7.62□□□□□ -1.19
PAX6-250ENST00000639054 XAGE1AQ9HD64 81 aa7.62□□□□□ -1.19
PAX6-250ENST00000639054 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
PAX6-250ENST00000639054 COX17Q14061 63 aa7.62□□□□□ -1.19
PAX6-250ENST00000639054 SND1-IT1Q9HBX3 110 aa7.62□□□□□ -1.19
PAX6-250ENST00000639054 PKD1P98161 4303 aa7.61□□□□□ -1.19
PAX6-250ENST00000639054 A4D1N5 150 aa7.61□□□□□ -1.19
PAX6-250ENST00000639054 F8WDY8 70 aa7.61□□□□□ -1.19
PAX6-250ENST00000639054 CNBPP62633 177 aaKnown RBP7.61□□□□□ -1.19
PAX6-250ENST00000639054 RPL18AQ02543 176 aaKnown RBP7.61□□□□□ -1.19
PAX6-250ENST00000639054 Q8NDZ9 215 aa7.61□□□□□ -1.19
PAX6-250ENST00000639054 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
PAX6-250ENST00000639054 TSPAN13O95857 204 aa7.6□□□□□ -1.19
PAX6-250ENST00000639054 DNAH5Q8TE73 4624 aa7.6□□□□□ -1.19
PAX6-250ENST00000639054 RYR3Q15413 4870 aa7.59□□□□□ -1.19
PAX6-250ENST00000639054 MT-ATP8P03928 68 aa7.59□□□□□ -1.19
PAX6-250ENST00000639054 PRR3P79522 188 aaKnown RBP7.59□□□□□ -1.19
PAX6-250ENST00000639054 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
PAX6-250ENST00000639054 IFITM1P13164 125 aa7.58□□□□□ -1.2
PAX6-250ENST00000639054 XGP55808 180 aa7.58□□□□□ -1.2
PAX6-250ENST00000639054 GAGE2BQ13066 116 aa7.58□□□□□ -1.2
PAX6-250ENST00000639054 A6NJY4 79 aa7.58□□□□□ -1.2
PAX6-250ENST00000639054 PSMB2P49721 201 aa7.58□□□□□ -1.2
PAX6-250ENST00000639054 CFC1BP0CG36 223 aa7.57□□□□□ -1.2
PAX6-250ENST00000639054 CFC1P0CG37 223 aa7.57□□□□□ -1.2
PAX6-250ENST00000639054 C9orf129Q5T035 196 aaKnown RBP7.57□□□□□ -1.2
PAX6-250ENST00000639054 LOC107984156A0A0G2JMH3 177 aa7.57□□□□□ -1.2
PAX6-250ENST00000639054 KRTAP10-2P60368 255 aa7.57□□□□□ -1.2
PAX6-250ENST00000639054 ARL17AQ8IVW1 177 aa7.57□□□□□ -1.2
PAX6-250ENST00000639054 C9orf163Q8N9P6 203 aa7.57□□□□□ -1.2
PAX6-250ENST00000639054 A0A096LNI7 61 aa7.56□□□□□ -1.2
PAX6-250ENST00000639054 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
PAX6-250ENST00000639054 LOC107984640A0A0U1RRK4 108 aa7.56□□□□□ -1.2
PAX6-250ENST00000639054 TLX1NBP0CAT3 122 aa7.56□□□□□ -1.2
PAX6-250ENST00000639054 TEN1Q86WV5 123 aa7.56□□□□□ -1.2
PAX6-250ENST00000639054 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
PAX6-250ENST00000639054 TCL1BO95988 128 aa7.55□□□□□ -1.2
PAX6-250ENST00000639054 CHTF8P0CG12 524 aa7.55□□□□□ -1.2
PAX6-250ENST00000639054 PPDPFLQ8WWR9 84 aa7.55□□□□□ -1.2
PAX6-250ENST00000639054 IGKV2-28A0A075B6P5 120 aa7.55□□□□□ -1.2
PAX6-250ENST00000639054 IGKV2D-28P01615 120 aa7.55□□□□□ -1.2
PAX6-250ENST00000639054 IGLV5-52A0A0A0MRZ9 124 aa7.54□□□□□ -1.2
PAX6-250ENST00000639054 PANO1I0J062 215 aa7.54□□□□□ -1.2
PAX6-250ENST00000639054 NCR3O14931 201 aa7.54□□□□□ -1.2
PAX6-250ENST00000639054 SDIM1Q6ZPB5 146 aa7.54□□□□□ -1.2
PAX6-250ENST00000639054 SERTAD4-AS1Q5TG53 156 aa7.53□□□□□ -1.2
PAX6-250ENST00000639054 TRBV20-1A0A075B6N2 111 aa7.53□□□□□ -1.2
PAX6-250ENST00000639054 LINC00337Q8N6G1 96 aa7.53□□□□□ -1.2
PAX6-250ENST00000639054 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
PAX6-250ENST00000639054 H7C2G1 150 aa7.52□□□□□ -1.21
PAX6-250ENST00000639054 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.21
PAX6-250ENST00000639054 PKHD1P08F94 4074 aa7.52□□□□□ -1.21
PAX6-250ENST00000639054 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
PAX6-250ENST00000639054 C16orf90A8MZG2 172 aa7.51□□□□□ -1.21
PAX6-250ENST00000639054 VPREB1P12018 145 aa7.51□□□□□ -1.21
PAX6-250ENST00000639054 ANKRD29Q8N6D5 301 aa7.51□□□□□ -1.21
PAX6-250ENST00000639054 A0A0B4J2C4 111 aa7.5□□□□□ -1.21
PAX6-250ENST00000639054 PPDPFQ9H3Y8 114 aa7.5□□□□□ -1.21
PAX6-250ENST00000639054 A0A1W2PNN7 141 aa7.5□□□□□ -1.21
PAX6-250ENST00000639054 FAM19A5Q7Z5A7 132 aaPredicted RBP7.5□□□□□ -1.21
PAX6-250ENST00000639054 PRO1854Q9UHT4 67 aa7.5□□□□□ -1.21
PAX6-250ENST00000639054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
PAX6-250ENST00000639054 NDUFC2O95298 119 aa7.49□□□□□ -1.21
PAX6-250ENST00000639054 RPL13AP40429 203 aaKnown RBP7.49□□□□□ -1.21
PAX6-250ENST00000639054 OR13C6PQ8NH95 151 aa7.49□□□□□ -1.21
PAX6-250ENST00000639054 DNAH8Q96JB1 4490 aa7.49□□□□□ -1.21
PAX6-250ENST00000639054 M0QXV9 152 aa7.48□□□□□ -1.21
PAX6-250ENST00000639054 SLC25A20O43772 301 aa7.48□□□□□ -1.21
PAX6-250ENST00000639054 SCGB1C2P0DMR2 95 aa7.48□□□□□ -1.21
PAX6-250ENST00000639054 DPH3Q96FX2 82 aa7.47□□□□□ -1.21
PAX6-250ENST00000639054 LINC00336Q6ZUF6 198 aa7.47□□□□□ -1.21
PAX6-250ENST00000639054 ANAPC13Q9BS18 74 aa7.47□□□□□ -1.21
PAX6-250ENST00000639054 Q1RN00 199 aa7.46□□□□□ -1.22
PAX6-250ENST00000639054 C22orf24Q9Y442 160 aa7.46□□□□□ -1.22
PAX6-250ENST00000639054 TRAV13-2A0A0B4J235 113 aa7.45□□□□□ -1.22
PAX6-250ENST00000639054 C9JAW5 83 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms