RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 LINC01546A6NGU7 62 aa6.41□□□□□ -1.38
PAX6-238ENST00000638755 K7EMI3 77 aa6.41□□□□□ -1.38
PAX6-238ENST00000638755 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
PAX6-238ENST00000638755 TOMM6Q96B49 74 aa6.41□□□□□ -1.38
PAX6-238ENST00000638755 A0A096LNJ9 63 aa6.4□□□□□ -1.38
PAX6-238ENST00000638755 PMCHL1Q16048 86 aa6.4□□□□□ -1.38
PAX6-238ENST00000638755 TEX43Q6ZNM6 134 aa6.4□□□□□ -1.38
PAX6-238ENST00000638755 SCGB3A1Q96QR1 104 aa6.4□□□□□ -1.38
PAX6-238ENST00000638755 AMELXQ99217 191 aa6.4□□□□□ -1.38
PAX6-238ENST00000638755 VCX2Q9H322 139 aa6.4□□□□□ -1.38
PAX6-238ENST00000638755 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
PAX6-238ENST00000638755 F8VRH5 84 aa6.39□□□□□ -1.39
PAX6-238ENST00000638755 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
PAX6-238ENST00000638755 Q6ZN92 141 aa6.39□□□□□ -1.39
PAX6-238ENST00000638755 Q8IZM0 81 aa6.39□□□□□ -1.39
PAX6-238ENST00000638755 LINC01561Q8N1V8 128 aa6.39□□□□□ -1.39
PAX6-238ENST00000638755 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
PAX6-238ENST00000638755 TIMM17AQ99595 171 aa6.39□□□□□ -1.39
PAX6-238ENST00000638755 HIGD2AQ9BW72 106 aa6.39□□□□□ -1.39
PAX6-238ENST00000638755 IGLV5-37A0A075B6J1 123 aa6.38□□□□□ -1.39
PAX6-238ENST00000638755 ERASQ7Z444 233 aa6.38□□□□□ -1.39
PAX6-238ENST00000638755 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
PAX6-238ENST00000638755 COLCA2A8K830 154 aa6.37□□□□□ -1.39
PAX6-238ENST00000638755 TRGC2P03986 189 aa6.37□□□□□ -1.39
PAX6-238ENST00000638755 LINC00614P0C842 121 aa6.37□□□□□ -1.39
PAX6-238ENST00000638755 Q8N377 158 aa6.37□□□□□ -1.39
PAX6-238ENST00000638755 SPRR4Q96PI1 79 aa6.37□□□□□ -1.39
PAX6-238ENST00000638755 C2orf88Q9BSF0 95 aa6.37□□□□□ -1.39
PAX6-238ENST00000638755 NPSP0C0P6 89 aa6.36□□□□□ -1.39
PAX6-238ENST00000638755 G0S2P27469 103 aa6.36□□□□□ -1.39
PAX6-238ENST00000638755 SLC25A20O43772 301 aa6.35□□□□□ -1.39
PAX6-238ENST00000638755 CST9LQ9H4G1 147 aa6.35□□□□□ -1.39
PAX6-238ENST00000638755 CDKN2A-AS1Q9UH64 79 aa6.35□□□□□ -1.39
PAX6-238ENST00000638755 M0R378 163 aa6.34□□□□□ -1.39
PAX6-238ENST00000638755 HBDP02042 147 aa6.34□□□□□ -1.39
PAX6-238ENST00000638755 RAB5BP61020 215 aa6.34□□□□□ -1.39
PAX6-238ENST00000638755 PDZD11Q5EBL8 140 aa6.34□□□□□ -1.39
PAX6-238ENST00000638755 PAPPA-AS1Q5QFB9 102 aa6.34□□□□□ -1.39
PAX6-238ENST00000638755 FAM19A3Q7Z5A8 133 aa6.34□□□□□ -1.39
PAX6-238ENST00000638755 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
PAX6-238ENST00000638755 NDUFA6P56556 154 aa6.33□□□□□ -1.4
PAX6-238ENST00000638755 LINC00310P59036 64 aa6.33□□□□□ -1.4
PAX6-238ENST00000638755 PMVKQ15126 192 aa6.33□□□□□ -1.4
PAX6-238ENST00000638755 HERVK_113P63121 156 aa6.32□□□□□ -1.4
PAX6-238ENST00000638755 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
PAX6-238ENST00000638755 GEMIN7Q9H840 131 aaKnown RBP6.32□□□□□ -1.4
PAX6-238ENST00000638755 ZNF706Q9Y5V0 76 aaPredicted RBP6.32□□□□□ -1.4
PAX6-238ENST00000638755 TINCRA0A1B0GVN0 87 aa6.31□□□□□ -1.4
PAX6-238ENST00000638755 C9orf92A6NGG3 77 aa6.31□□□□□ -1.4
PAX6-238ENST00000638755 LINC01549A6NIU2 74 aa6.31□□□□□ -1.4
PAX6-238ENST00000638755 CHCHD1Q96BP2 118 aaKnown RBP6.31□□□□□ -1.4
PAX6-238ENST00000638755 SERF1AO75920 110 aa6.3□□□□□ -1.4
PAX6-238ENST00000638755 SPINK8P0C7L1 97 aa6.3□□□□□ -1.4
PAX6-238ENST00000638755 CFC1P0CG37 223 aa6.3□□□□□ -1.4
PAX6-238ENST00000638755 CXCL5P42830 114 aa6.3□□□□□ -1.4
PAX6-238ENST00000638755 RPS29P62273 56 aaKnown RBP6.3□□□□□ -1.4
PAX6-238ENST00000638755 IGLV5-45A0A087WSX0 123 aa6.29□□□□□ -1.4
PAX6-238ENST00000638755 SMIM1B2RUZ4 78 aa6.29□□□□□ -1.4
PAX6-238ENST00000638755 HSBP1O75506 76 aa6.29□□□□□ -1.4
PAX6-238ENST00000638755 ATP5LO75964 103 aa6.29□□□□□ -1.4
PAX6-238ENST00000638755 IGLC3P0DOY3 106 aa6.29□□□□□ -1.4
PAX6-238ENST00000638755 SEC11AP67812 179 aa6.29□□□□□ -1.4
PAX6-238ENST00000638755 MOBPQ13875 183 aa6.29□□□□□ -1.4
PAX6-238ENST00000638755 IGLV9-49A0A0B4J1Y8 123 aa6.28□□□□□ -1.4
PAX6-238ENST00000638755 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
PAX6-238ENST00000638755 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
PAX6-238ENST00000638755 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
PAX6-238ENST00000638755 VPREB1P12018 145 aa6.27□□□□□ -1.41
PAX6-238ENST00000638755 ZNF22P17026 224 aaPredicted RBP6.27□□□□□ -1.41
PAX6-238ENST00000638755 IFI27L1Q96BM0 104 aa6.27□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 ATP6V1G1O75348 118 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 FABP4P15090 132 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST2H2BEQ16778 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.26□□□□□ -1.41
PAX6-238ENST00000638755 COX7B2Q8TF08 81 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BHQ93079 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BNQ99877 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 HIST1H2BMQ99879 126 aa6.26□□□□□ -1.41
PAX6-238ENST00000638755 CHTOPQ9Y3Y2 248 aaKnown RBP6.26□□□□□ -1.41
PAX6-238ENST00000638755 H0Y8G0 127 aa6.25□□□□□ -1.41
PAX6-238ENST00000638755 IGLV5-39A0A0G2JS06 123 aa6.24□□□□□ -1.41
PAX6-238ENST00000638755 H3BRM9 83 aa6.24□□□□□ -1.41
PAX6-238ENST00000638755 PFN2P35080 140 aa6.24□□□□□ -1.41
PAX6-238ENST00000638755 TMEM170BQ5T4T1 132 aa6.24□□□□□ -1.41
PAX6-238ENST00000638755 GAGE2AQ6NT46 116 aa6.24□□□□□ -1.41
PAX6-238ENST00000638755 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
PAX6-238ENST00000638755 TRAV12-1A0A0B4J245 112 aa6.23□□□□□ -1.41
PAX6-238ENST00000638755 LEPROTL1O95214 131 aa6.23□□□□□ -1.41
PAX6-238ENST00000638755 Q6Q795 121 aa6.23□□□□□ -1.41
PAX6-238ENST00000638755 SSBP3-AS1Q7Z2R9 100 aa6.23□□□□□ -1.41
PAX6-238ENST00000638755 SMCR5Q8TEV8 140 aa6.23□□□□□ -1.41
PAX6-238ENST00000638755 RPL24P83731 157 aaKnown RBP6.22□□□□□ -1.41
PAX6-238ENST00000638755 Q8NDZ9 215 aa6.22□□□□□ -1.41
PAX6-238ENST00000638755 PMCHL2Q9BQD1 86 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms