RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 RPL13AP40429 203 aaKnown RBP8.3□□□□□ -1.08
GFAP-227ENST00000638400 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
GFAP-227ENST00000638400 NTM-AS1Q6ZSK4 140 aa8.3□□□□□ -1.08
GFAP-227ENST00000638400 TMEM101Q96IK0 257 aa8.3□□□□□ -1.08
GFAP-227ENST00000638400 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
GFAP-227ENST00000638400 CDKN2A-AS1Q9UH64 79 aa8.3□□□□□ -1.08
GFAP-227ENST00000638400 TRBV10-2A0A0K0K1G8 114 aa8.29□□□□□ -1.08
GFAP-227ENST00000638400 LECT2O14960 151 aa8.29□□□□□ -1.08
GFAP-227ENST00000638400 Q1RN00 199 aa8.29□□□□□ -1.08
GFAP-227ENST00000638400 LINC01620Q4KN68 170 aa8.29□□□□□ -1.08
GFAP-227ENST00000638400 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
GFAP-227ENST00000638400 SMIM1B2RUZ4 78 aa8.28□□□□□ -1.08
GFAP-227ENST00000638400 ANGP03950 147 aaKnown RBP8.28□□□□□ -1.08
GFAP-227ENST00000638400 SFTA2Q6UW10 78 aa8.28□□□□□ -1.08
GFAP-227ENST00000638400 ANKRD29Q8N6D5 301 aa8.28□□□□□ -1.08
GFAP-227ENST00000638400 C1orf43Q9BWL3 253 aa8.28□□□□□ -1.08
GFAP-227ENST00000638400 UBE2L6O14933 153 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 TRIAP1O43715 76 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 PRSS2P07478 247 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 XGP55808 180 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 GAGE6Q13070 117 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
GFAP-227ENST00000638400 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 ENHOQ6UWT2 76 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 MTURNQ8N3F0 131 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 CARD19Q96LW7 228 aa8.27□□□□□ -1.09
GFAP-227ENST00000638400 C9JAW5 83 aa8.26□□□□□ -1.09
GFAP-227ENST00000638400 ZNF625Q96I27 306 aaPredicted RBP8.26□□□□□ -1.09
GFAP-227ENST00000638400 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
GFAP-227ENST00000638400 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.25□□□□□ -1.09
GFAP-227ENST00000638400 LST1O00453 97 aa8.25□□□□□ -1.09
GFAP-227ENST00000638400 LINC00308Q8TCZ7 52 aa8.25□□□□□ -1.09
GFAP-227ENST00000638400 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
GFAP-227ENST00000638400 COX6A2Q02221 97 aa8.24□□□□□ -1.09
GFAP-227ENST00000638400 LINC01561Q8N1V8 128 aa8.24□□□□□ -1.09
GFAP-227ENST00000638400 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
GFAP-227ENST00000638400 EPM2AB3EWF7 344 aa8.23□□□□□ -1.09
GFAP-227ENST00000638400 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
GFAP-227ENST00000638400 CLPSL2Q6UWE3 100 aa8.23□□□□□ -1.09
GFAP-227ENST00000638400 FAT1Q14517 4588 aa8.22□□□□□ -1.09
GFAP-227ENST00000638400 A0A1B0GV72 72 aa8.22□□□□□ -1.09
GFAP-227ENST00000638400 FAM240AA0A1B0GVK7 77 aa8.22□□□□□ -1.09
GFAP-227ENST00000638400 A0A1B0GUV1 79 aa8.21□□□□□ -1.1
GFAP-227ENST00000638400 H7C2G1 150 aa8.21□□□□□ -1.1
GFAP-227ENST00000638400 HAMPP81172 84 aa8.21□□□□□ -1.1
GFAP-227ENST00000638400 REG3AQ06141 175 aa8.21□□□□□ -1.1
GFAP-227ENST00000638400 TRAV13-1A0A0B4J241 112 aa8.2□□□□□ -1.1
GFAP-227ENST00000638400 USP17L23D6RBM5 183 aa8.2□□□□□ -1.1
GFAP-227ENST00000638400 COX7A2LO14548 114 aa8.2□□□□□ -1.1
GFAP-227ENST00000638400 MEIG1Q5JSS6 88 aa8.2□□□□□ -1.1
GFAP-227ENST00000638400 Q5VSD8 79 aa8.2□□□□□ -1.1
GFAP-227ENST00000638400 Q6ZSA8 131 aa8.2□□□□□ -1.1
GFAP-227ENST00000638400 DNAH8Q96JB1 4490 aa8.19□□□□□ -1.1
GFAP-227ENST00000638400 IGLV4-60A0A075B6I1 120 aa8.19□□□□□ -1.1
GFAP-227ENST00000638400 TRAV13-2A0A0B4J235 113 aa8.19□□□□□ -1.1
GFAP-227ENST00000638400 TRACP01848 142 aa8.19□□□□□ -1.1
GFAP-227ENST00000638400 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
GFAP-227ENST00000638400 COX7B2Q8TF08 81 aa8.19□□□□□ -1.1
GFAP-227ENST00000638400 FAM30AQ9NZY2 134 aa8.19□□□□□ -1.1
GFAP-227ENST00000638400 A0A087WZ39 114 aa8.18□□□□□ -1.1
GFAP-227ENST00000638400 TRAV8-4A0A0B4J246 113 aa8.18□□□□□ -1.1
GFAP-227ENST00000638400 SMR3BP02814 79 aaPredicted RBP8.18□□□□□ -1.1
GFAP-227ENST00000638400 KRTAP26-1Q6PEX3 210 aa8.18□□□□□ -1.1
GFAP-227ENST00000638400 IGLV10-54A0A075B6I4 117 aa8.17□□□□□ -1.1
GFAP-227ENST00000638400 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
GFAP-227ENST00000638400 Q6Q795 121 aa8.17□□□□□ -1.1
GFAP-227ENST00000638400 IGHV3OR16-9A0A0B4J2B5 98 aa8.16□□□□□ -1.1
GFAP-227ENST00000638400 SOSTDC1Q6X4U4 206 aa8.16□□□□□ -1.1
GFAP-227ENST00000638400 ACYP1P07311 99 aa8.15□□□□□ -1.1
GFAP-227ENST00000638400 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.1
GFAP-227ENST00000638400 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.1
GFAP-227ENST00000638400 VPS13BQ7Z7G8 4022 aa8.15□□□□□ -1.11
GFAP-227ENST00000638400 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
GFAP-227ENST00000638400 INAFM2P0DMQ5 153 aa8.14□□□□□ -1.11
GFAP-227ENST00000638400 SRRM2Q9UQ35 2752 aaKnown RBP8.13□□□□□ -1.11
GFAP-227ENST00000638400 NPC2P61916 151 aa8.13□□□□□ -1.11
GFAP-227ENST00000638400 SCXQ7RTU7 201 aa8.13□□□□□ -1.11
GFAP-227ENST00000638400 DAND5Q8N907 189 aa8.13□□□□□ -1.11
GFAP-227ENST00000638400 CLEC2BQ92478 149 aa8.13□□□□□ -1.11
GFAP-227ENST00000638400 IGKV3OR2-268A0A0C4DH90 116 aa8.12□□□□□ -1.11
GFAP-227ENST00000638400 LINC00959A0A1B0GUT2 108 aa8.12□□□□□ -1.11
GFAP-227ENST00000638400 SS18Q15532 418 aa8.12□□□□□ -1.11
GFAP-227ENST00000638400 Q8IZM0 81 aa8.12□□□□□ -1.11
GFAP-227ENST00000638400 SNCGO76070 127 aa8.11□□□□□ -1.11
GFAP-227ENST00000638400 CXCL5P42830 114 aa8.11□□□□□ -1.11
GFAP-227ENST00000638400 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
GFAP-227ENST00000638400 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
GFAP-227ENST00000638400 H0YGX0 51 aa8.1□□□□□ -1.11
GFAP-227ENST00000638400 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
GFAP-227ENST00000638400 CKS1BP61024 79 aa8.1□□□□□ -1.11
GFAP-227ENST00000638400 MIR7-3HGQ8N6C7 128 aa8.1□□□□□ -1.11
GFAP-227ENST00000638400 C9orf163Q8N9P6 203 aa8.1□□□□□ -1.11
GFAP-227ENST00000638400 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
GFAP-227ENST00000638400 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
GFAP-227ENST00000638400 CFAP161Q6P656 301 aa8.09□□□□□ -1.11
GFAP-227ENST00000638400 CIRBP-AS1Q8TBR5 109 aa8.09□□□□□ -1.11
GFAP-227ENST00000638400 MYCBP2O75592 4640 aa8.09□□□□□ -1.11
GFAP-227ENST00000638400 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
GFAP-227ENST00000638400 C15orf56Q8N910 161 aa8.08□□□□□ -1.12
GFAP-227ENST00000638400 A0A1B0GX51 115 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms