RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 UQCRQO14949 82 aa5.8□□□□□ -1.48
CACNA1A-254ENST00000637952 PPDPFLQ8WWR9 84 aa5.8□□□□□ -1.48
CACNA1A-254ENST00000637952 IGLV4-69A0A075B6H9 119 aa5.8□□□□□ -1.48
CACNA1A-254ENST00000637952 LEPROTO15243 131 aa5.8□□□□□ -1.48
CACNA1A-254ENST00000637952 CXCL5P42830 114 aa5.8□□□□□ -1.48
CACNA1A-254ENST00000637952 C2orf82Q6UX34 121 aa5.8□□□□□ -1.48
CACNA1A-254ENST00000637952 DSCR8Q96T75 97 aa5.79□□□□□ -1.48
CACNA1A-254ENST00000637952 TCL1BO95988 128 aa5.79□□□□□ -1.48
CACNA1A-254ENST00000637952 S100A7L2Q5SY68 101 aa5.79□□□□□ -1.48
CACNA1A-254ENST00000637952 NKAPP1Q8N9T2 125 aa5.79□□□□□ -1.48
CACNA1A-254ENST00000637952 IGLV5-52A0A0A0MRZ9 124 aa5.79□□□□□ -1.48
CACNA1A-254ENST00000637952 TTTY13Q9BZ97 58 aa5.79□□□□□ -1.48
CACNA1A-254ENST00000637952 A0A087WZ39 114 aa5.78□□□□□ -1.48
CACNA1A-254ENST00000637952 SFTA2Q6UW10 78 aa5.78□□□□□ -1.48
CACNA1A-254ENST00000637952 UBE2BP63146 152 aa5.78□□□□□ -1.48
CACNA1A-254ENST00000637952 SNCGO76070 127 aa5.77□□□□□ -1.49
CACNA1A-254ENST00000637952 SCGB1C2P0DMR2 95 aa5.77□□□□□ -1.49
CACNA1A-254ENST00000637952 PSMB2P49721 201 aa5.77□□□□□ -1.49
CACNA1A-254ENST00000637952 UNQ6190/PRO20217Q6UXQ8 127 aa5.77□□□□□ -1.49
CACNA1A-254ENST00000637952 TMEM223A0PJW6 202 aa5.77□□□□□ -1.49
CACNA1A-254ENST00000637952 FBN3Q75N90 2809 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 SMIM13P0DJ93 91 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 CEND1Q8N111 149 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 DAND5Q8N907 189 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 SPANXCQ9NY87 97 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 IGHV3OR16-9A0A0B4J2B5 98 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 XAGE1AQ9HD64 81 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 IGKV2D-26A0A0A0MRZ7 120 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 LINC01546A6NGU7 62 aa5.76□□□□□ -1.49
CACNA1A-254ENST00000637952 SMIM1B2RUZ4 78 aa5.75□□□□□ -1.49
CACNA1A-254ENST00000637952 ANKRD29Q8N6D5 301 aa5.75□□□□□ -1.49
CACNA1A-254ENST00000637952 TMEM258P61165 79 aa5.75□□□□□ -1.49
CACNA1A-254ENST00000637952 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
CACNA1A-254ENST00000637952 COX7CP15954 63 aa5.75□□□□□ -1.49
CACNA1A-254ENST00000637952 MIR7-3HGQ8N6C7 128 aa5.75□□□□□ -1.49
CACNA1A-254ENST00000637952 PRR34Q9NV39 138 aa5.75□□□□□ -1.49
CACNA1A-254ENST00000637952 DNHD1Q96M86 4753 aa5.74□□□□□ -1.49
CACNA1A-254ENST00000637952 Q8IZM0 81 aa5.74□□□□□ -1.49
CACNA1A-254ENST00000637952 LCE6AA0A183 80 aa5.74□□□□□ -1.49
CACNA1A-254ENST00000637952 RPL13AP40429 203 aaKnown RBP5.74□□□□□ -1.49
CACNA1A-254ENST00000637952 H3BS24 57 aa5.74□□□□□ -1.49
CACNA1A-254ENST00000637952 C9orf116Q5BN46 136 aaPredicted RBP5.74□□□□□ -1.49
CACNA1A-254ENST00000637952 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
CACNA1A-254ENST00000637952 PRR15Q8IV56 129 aa5.73□□□□□ -1.49
CACNA1A-254ENST00000637952 TENM2Q9NT68 2774 aa5.72□□□□□ -1.49
CACNA1A-254ENST00000637952 C9orf153Q5TBE3 101 aa5.72□□□□□ -1.49
CACNA1A-254ENST00000637952 C16orf90A8MZG2 172 aa5.72□□□□□ -1.49
CACNA1A-254ENST00000637952 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 NHP2Q9NX24 153 aaKnown RBP5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 A0A0J9YXY3 114 aa5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 FUSP35637 526 aaKnown RBP eCLIP5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 SND1-IT1Q9HBX3 110 aa5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 A0A087WTM6 91 aa5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 LOC107984156A0A0G2JMH3 177 aa5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 ARL17AQ8IVW1 177 aa5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
CACNA1A-254ENST00000637952 COX6CP09669 75 aa5.7□□□□□ -1.5
CACNA1A-254ENST00000637952 TNP2Q05952 138 aa5.7□□□□□ -1.5
CACNA1A-254ENST00000637952 RTL8CO15255 209 aa5.7□□□□□ -1.5
CACNA1A-254ENST00000637952 MEGF8Q7Z7M0 2845 aa5.7□□□□□ -1.5
CACNA1A-254ENST00000637952 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
CACNA1A-254ENST00000637952 hADV29S1A0JD25 119 aa5.7□□□□□ -1.5
CACNA1A-254ENST00000637952 IMUPQ9GZP8 106 aa5.7□□□□□ -1.5
CACNA1A-254ENST00000637952 MAPKAPK5-AS1Q8N8E1 139 aa5.69□□□□□ -1.5
CACNA1A-254ENST00000637952 NCR3O14931 201 aa5.69□□□□□ -1.5
CACNA1A-254ENST00000637952 MUSTN1Q8IVN3 82 aa5.69□□□□□ -1.5
CACNA1A-254ENST00000637952 LINC00474Q9P2X8 69 aa5.69□□□□□ -1.5
CACNA1A-254ENST00000637952 FAM240AA0A1B0GVK7 77 aa5.68□□□□□ -1.5
CACNA1A-254ENST00000637952 C10orf25Q5T742 122 aa5.68□□□□□ -1.5
CACNA1A-254ENST00000637952 NTN5Q8WTR8 489 aaPredicted RBP5.68□□□□□ -1.5
CACNA1A-254ENST00000637952 A0A0U1RQV1 116 aa5.67□□□□□ -1.5
CACNA1A-254ENST00000637952 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
CACNA1A-254ENST00000637952 C7orf33Q8WU49 177 aa5.67□□□□□ -1.5
CACNA1A-254ENST00000637952 SLC25A20O43772 301 aa5.67□□□□□ -1.5
CACNA1A-254ENST00000637952 TSPEAR-AS2P59090 65 aa5.67□□□□□ -1.5
CACNA1A-254ENST00000637952 IGLV5-45A0A087WSX0 123 aa5.67□□□□□ -1.5
CACNA1A-254ENST00000637952 GVQW2A0A096LPI5 108 aaPredicted RBP5.67□□□□□ -1.5
CACNA1A-254ENST00000637952 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
CACNA1A-254ENST00000637952 Q8N814 137 aa5.66□□□□□ -1.5
CACNA1A-254ENST00000637952 IGLV5-39A0A0G2JS06 123 aa5.66□□□□□ -1.5
CACNA1A-254ENST00000637952 C15orf56Q8N910 161 aa5.66□□□□□ -1.5
CACNA1A-254ENST00000637952 C6orf48Q9UBA6 75 aa5.66□□□□□ -1.5
CACNA1A-254ENST00000637952 COX17Q14061 63 aa5.65□□□□□ -1.5
CACNA1A-254ENST00000637952 LYRM7Q5U5X0 104 aa5.65□□□□□ -1.5
CACNA1A-254ENST00000637952 ETDCA0A1B0GVM5 59 aa5.65□□□□□ -1.51
CACNA1A-254ENST00000637952 TRAV13-2A0A0B4J235 113 aa5.65□□□□□ -1.51
CACNA1A-254ENST00000637952 GAGE2AQ6NT46 116 aa5.65□□□□□ -1.51
CACNA1A-254ENST00000637952 DNAL4O96015 105 aa5.64□□□□□ -1.51
CACNA1A-254ENST00000637952 IGKV2-28A0A075B6P5 120 aa5.64□□□□□ -1.51
CACNA1A-254ENST00000637952 IGKV2D-28P01615 120 aa5.64□□□□□ -1.51
CACNA1A-254ENST00000637952 UBE2AP49459 152 aa5.64□□□□□ -1.51
CACNA1A-254ENST00000637952 LINC00308Q8TCZ7 52 aa5.64□□□□□ -1.51
CACNA1A-254ENST00000637952 C22orf24Q9Y442 160 aa5.64□□□□□ -1.51
CACNA1A-254ENST00000637952 RPL37AP8A6NKH3 93 aa5.64□□□□□ -1.51
CACNA1A-254ENST00000637952 CHTF8P0CG12 524 aa5.64□□□□□ -1.51
CACNA1A-254ENST00000637952 TEX49A0A1B0GTD5 131 aa5.63□□□□□ -1.51
CACNA1A-254ENST00000637952 Q6ZR54 194 aa5.63□□□□□ -1.51
CACNA1A-254ENST00000637952 LRCOL1A6NCL2 159 aa5.63□□□□□ -1.51
CACNA1A-254ENST00000637952 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms