RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 RPL13AP40429 203 aaKnown RBP9.01□□□□□ -0.97
CACNA1A-230ENST00000636768 NKAPP1Q8N9T2 125 aa9.01□□□□□ -0.97
CACNA1A-230ENST00000636768 LINC00167Q96N53 147 aa9.01□□□□□ -0.97
CACNA1A-230ENST00000636768 IGLV5-39A0A0G2JS06 123 aa9□□□□□ -0.97
CACNA1A-230ENST00000636768 BCE1O60756 84 aa9□□□□□ -0.97
CACNA1A-230ENST00000636768 ZNF22P17026 224 aaPredicted RBP9□□□□□ -0.97
CACNA1A-230ENST00000636768 PFN2P35080 140 aa9□□□□□ -0.97
CACNA1A-230ENST00000636768 RPL28P46779 137 aaKnown RBP9□□□□□ -0.97
CACNA1A-230ENST00000636768 LINC00587B1AMM8 73 aa8.99□□□□□ -0.97
CACNA1A-230ENST00000636768 TSTD3H0UI37 97 aa8.99□□□□□ -0.97
CACNA1A-230ENST00000636768 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
CACNA1A-230ENST00000636768 IGLV5-37A0A075B6J1 123 aa8.98□□□□□ -0.97
CACNA1A-230ENST00000636768 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
CACNA1A-230ENST00000636768 C11orf86A6NJI1 115 aa8.97□□□□□ -0.97
CACNA1A-230ENST00000636768 ERG28Q9UKR5 140 aa8.97□□□□□ -0.97
CACNA1A-230ENST00000636768 UBE2AP49459 152 aa8.95□□□□□ -0.98
CACNA1A-230ENST00000636768 ZNF625Q96I27 306 aaPredicted RBP8.95□□□□□ -0.98
CACNA1A-230ENST00000636768 CHTOPQ9Y3Y2 248 aaKnown RBP8.95□□□□□ -0.98
CACNA1A-230ENST00000636768 IGKV2-28A0A075B6P5 120 aa8.94□□□□□ -0.98
CACNA1A-230ENST00000636768 IGKV2D-28P01615 120 aa8.94□□□□□ -0.98
CACNA1A-230ENST00000636768 SFTA2Q6UW10 78 aa8.94□□□□□ -0.98
CACNA1A-230ENST00000636768 SND1-IT1Q9HBX3 110 aa8.94□□□□□ -0.98
CACNA1A-230ENST00000636768 SERF1AO75920 110 aa8.93□□□□□ -0.98
CACNA1A-230ENST00000636768 SCGB1D1O95968 90 aa8.93□□□□□ -0.98
CACNA1A-230ENST00000636768 COX17Q14061 63 aa8.93□□□□□ -0.98
CACNA1A-230ENST00000636768 CHCHD1Q96BP2 118 aaKnown RBP8.93□□□□□ -0.98
CACNA1A-230ENST00000636768 RPL24P83731 157 aaKnown RBP8.92□□□□□ -0.98
CACNA1A-230ENST00000636768 VPREB1P12018 145 aa8.91□□□□□ -0.98
CACNA1A-230ENST00000636768 DDTP30046 118 aa8.91□□□□□ -0.98
CACNA1A-230ENST00000636768 IFI27L1Q96BM0 104 aa8.91□□□□□ -0.98
CACNA1A-230ENST00000636768 CRYGAP11844 174 aa8.9□□□□□ -0.98
CACNA1A-230ENST00000636768 A0A087X002 238 aa8.89□□□□□ -0.99
CACNA1A-230ENST00000636768 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
CACNA1A-230ENST00000636768 LINC00158P58513 81 aa8.89□□□□□ -0.99
CACNA1A-230ENST00000636768 LINC00310P59036 64 aa8.89□□□□□ -0.99
CACNA1A-230ENST00000636768 PRR4Q16378 134 aa8.89□□□□□ -0.99
CACNA1A-230ENST00000636768 KRTAP13-1Q8IUC0 172 aa8.89□□□□□ -0.99
CACNA1A-230ENST00000636768 PRO1933Q9H354 126 aa8.89□□□□□ -0.99
CACNA1A-230ENST00000636768 TMEM223A0PJW6 202 aa8.88□□□□□ -0.99
CACNA1A-230ENST00000636768 HSBP1O75506 76 aa8.88□□□□□ -0.99
CACNA1A-230ENST00000636768 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
CACNA1A-230ENST00000636768 TYMSOSQ8TAI1 123 aa8.88□□□□□ -0.99
CACNA1A-230ENST00000636768 TMEM126AQ9H061 195 aa8.88□□□□□ -0.99
CACNA1A-230ENST00000636768 A0A0U1RRA0 63 aa8.87□□□□□ -0.99
CACNA1A-230ENST00000636768 TMEM238C9JI98 176 aa8.87□□□□□ -0.99
CACNA1A-230ENST00000636768 TSPAN13O95857 204 aa8.87□□□□□ -0.99
CACNA1A-230ENST00000636768 PRLHP81277 87 aa8.87□□□□□ -0.99
CACNA1A-230ENST00000636768 ANAPC11Q9NYG5 84 aa8.87□□□□□ -0.99
CACNA1A-230ENST00000636768 FAM19A2Q8N3H0 131 aa8.86□□□□□ -0.99
CACNA1A-230ENST00000636768 Q8NDZ9 215 aa8.86□□□□□ -0.99
CACNA1A-230ENST00000636768 H0Y8G0 127 aa8.85□□□□□ -0.99
CACNA1A-230ENST00000636768 C14orf144Q96I85 54 aa8.85□□□□□ -0.99
CACNA1A-230ENST00000636768 M0R378 163 aa8.84□□□□□ -0.99
CACNA1A-230ENST00000636768 MEIG1Q5JSS6 88 aa8.84□□□□□ -0.99
CACNA1A-230ENST00000636768 SMIM13P0DJ93 91 aa8.83□□□□□ -1
CACNA1A-230ENST00000636768 KRTDAPP60985 99 aa8.83□□□□□ -1
CACNA1A-230ENST00000636768 FAM229BQ4G0N7 80 aa8.83□□□□□ -1
CACNA1A-230ENST00000636768 VAMP8Q9BV40 100 aa8.83□□□□□ -1
CACNA1A-230ENST00000636768 RNF213Q63HN8 5207 aa8.82□□□□□ -1
CACNA1A-230ENST00000636768 HERV-K104P63124 156 aa8.81□□□□□ -1
CACNA1A-230ENST00000636768 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
CACNA1A-230ENST00000636768 IGKV2D-26A0A0A0MRZ7 120 aa8.8□□□□□ -1
CACNA1A-230ENST00000636768 LEPROTL1O95214 131 aa8.8□□□□□ -1
CACNA1A-230ENST00000636768 C3orf79P0CE67 100 aa8.8□□□□□ -1
CACNA1A-230ENST00000636768 BOD1L2Q8IYS8 172 aa8.8□□□□□ -1
CACNA1A-230ENST00000636768 MIR7-3HGQ8N6C7 128 aa8.8□□□□□ -1
CACNA1A-230ENST00000636768 NDUFA12Q9UI09 145 aa8.8□□□□□ -1
CACNA1A-230ENST00000636768 LPAP08519 4548 aa8.8□□□□□ -1
CACNA1A-230ENST00000636768 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
CACNA1A-230ENST00000636768 C20orf202A1L168 122 aa8.79□□□□□ -1
CACNA1A-230ENST00000636768 MIEN1Q9BRT3 115 aa8.79□□□□□ -1
CACNA1A-230ENST00000636768 HIGD2AQ9BW72 106 aa8.79□□□□□ -1
CACNA1A-230ENST00000636768 M0R143 59 aa8.78□□□□□ -1
CACNA1A-230ENST00000636768 NCR3O14931 201 aa8.78□□□□□ -1
CACNA1A-230ENST00000636768 LINC00304Q8N9R0 145 aa8.78□□□□□ -1
CACNA1A-230ENST00000636768 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
CACNA1A-230ENST00000636768 PLNP26678 52 aa8.77□□□□□ -1.01
CACNA1A-230ENST00000636768 PLEKHB2Q96CS7 222 aa8.77□□□□□ -1.01
CACNA1A-230ENST00000636768 HSPB8Q9UJY1 196 aa8.77□□□□□ -1.01
CACNA1A-230ENST00000636768 PAM16Q9Y3D7 125 aa8.77□□□□□ -1.01
CACNA1A-230ENST00000636768 PRYO14603 147 aa8.75□□□□□ -1.01
CACNA1A-230ENST00000636768 LEPROTO15243 131 aa8.75□□□□□ -1.01
CACNA1A-230ENST00000636768 TSPEAR-AS2P59090 65 aa8.75□□□□□ -1.01
CACNA1A-230ENST00000636768 SPATA45Q537H7 98 aa8.75□□□□□ -1.01
CACNA1A-230ENST00000636768 UQCR10Q9UDW1 63 aa8.75□□□□□ -1.01
CACNA1A-230ENST00000636768 DPM2O94777 84 aa8.74□□□□□ -1.01
CACNA1A-230ENST00000636768 HERVK_113P61574 105 aa8.74□□□□□ -1.01
CACNA1A-230ENST00000636768 PET117Q6UWS5 81 aa8.73□□□□□ -1.01
CACNA1A-230ENST00000636768 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
CACNA1A-230ENST00000636768 ZNF706Q9Y5V0 76 aaPredicted RBP8.73□□□□□ -1.01
CACNA1A-230ENST00000636768 ETDCA0A1B0GVM5 59 aa8.72□□□□□ -1.01
CACNA1A-230ENST00000636768 J3QQQ9 107 aa8.72□□□□□ -1.01
CACNA1A-230ENST00000636768 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
CACNA1A-230ENST00000636768 DAND5Q8N907 189 aa8.72□□□□□ -1.01
CACNA1A-230ENST00000636768 SPRR4Q96PI1 79 aa8.72□□□□□ -1.01
CACNA1A-230ENST00000636768 RETNLBQ9BQ08 111 aa8.72□□□□□ -1.01
CACNA1A-230ENST00000636768 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
CACNA1A-230ENST00000636768 TRBV10-3A0A0K0K1G6 114 aa8.71□□□□□ -1.02
CACNA1A-230ENST00000636768 SYS1-DBNDD2H3BUS1 97 aa8.71□□□□□ -1.02
CACNA1A-230ENST00000636768 IGKCP01834 107 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms