RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 AVPP01185 164 aa12.35□□□□□ -0.43
CACNA1A-225ENST00000636389 TSPEAR-AS2P59090 65 aa12.35□□□□□ -0.43
CACNA1A-225ENST00000636389 Q6ZPA2 131 aa12.35□□□□□ -0.43
CACNA1A-225ENST00000636389 ZNF295-AS1Q8N0V1 137 aa12.35□□□□□ -0.43
CACNA1A-225ENST00000636389 Q6ZSN1 163 aa12.33□□□□□ -0.43
CACNA1A-225ENST00000636389 KRTAP10-9P60411 292 aa12.33□□□□□ -0.44
CACNA1A-225ENST00000636389 A0A1B0GUV1 79 aa12.32□□□□□ -0.44
CACNA1A-225ENST00000636389 LINC00846Q9NV44 126 aa12.32□□□□□ -0.44
CACNA1A-225ENST00000636389 CRIPTQ9P021 101 aa12.31□□□□□ -0.44
CACNA1A-225ENST00000636389 PHF5AQ7RTV0 110 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-225ENST00000636389 TRAV22A0A0B4J277 110 aa12.3□□□□□ -0.44
CACNA1A-225ENST00000636389 CDSNQ15517 529 aa12.29□□□□□ -0.44
CACNA1A-225ENST00000636389 IGF2RP11717 2491 aa12.28□□□□□ -0.44
CACNA1A-225ENST00000636389 RTL8CO15255 209 aa12.28□□□□□ -0.44
CACNA1A-225ENST00000636389 C4orf26Q17RF5 130 aa12.27□□□□□ -0.44
CACNA1A-225ENST00000636389 PKD1L2Q7Z442 2459 aa12.27□□□□□ -0.44
CACNA1A-225ENST00000636389 RPL37AP61513 92 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-225ENST00000636389 CNFNQ9BYD5 112 aa12.26□□□□□ -0.45
CACNA1A-225ENST00000636389 C16orf95Q9H693 158 aa12.25□□□□□ -0.45
CACNA1A-225ENST00000636389 LINC00167Q96N53 147 aa12.25□□□□□ -0.45
CACNA1A-225ENST00000636389 AMELXQ99217 191 aa12.24□□□□□ -0.45
CACNA1A-225ENST00000636389 Q6ZRP5 223 aa12.24□□□□□ -0.45
CACNA1A-225ENST00000636389 SPATA3Q8NHX4 192 aa12.24□□□□□ -0.45
CACNA1A-225ENST00000636389 USP9XQ93008 2570 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-225ENST00000636389 LINC01554Q52M75 96 aa12.2□□□□□ -0.46
CACNA1A-225ENST00000636389 LINC01600Q96MT4 127 aa12.2□□□□□ -0.46
CACNA1A-225ENST00000636389 Q8NBF4 154 aa12.19□□□□□ -0.46
CACNA1A-225ENST00000636389 LINC00476Q8WZB0 136 aa12.19□□□□□ -0.46
CACNA1A-225ENST00000636389 FAM19A4Q96LR4 140 aa12.18□□□□□ -0.46
CACNA1A-225ENST00000636389 LINC01561Q8N1V8 128 aa12.18□□□□□ -0.46
CACNA1A-225ENST00000636389 KIF25-AS1Q9Y6Z4 181 aa12.18□□□□□ -0.46
CACNA1A-225ENST00000636389 EPM2AB3EWF7 344 aa12.18□□□□□ -0.46
CACNA1A-225ENST00000636389 NCOR2Q9Y618 2525 aa12.18□□□□□ -0.46
CACNA1A-225ENST00000636389 C9orf92A6NGG3 77 aa12.17□□□□□ -0.46
CACNA1A-225ENST00000636389 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-225ENST00000636389 IGLV6-57P01721 117 aa12.16□□□□□ -0.46
CACNA1A-225ENST00000636389 CDIP1Q9H305 208 aa12.15□□□□□ -0.46
CACNA1A-225ENST00000636389 LINC00315P59091 139 aa12.15□□□□□ -0.47
CACNA1A-225ENST00000636389 ANKRD11Q6UB99 2663 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-225ENST00000636389 CRIP3Q6Q6R5 217 aa12.12□□□□□ -0.47
CACNA1A-225ENST00000636389 MUC22E2RYF6 1773 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-225ENST00000636389 CR1P17927 2039 aa12.09□□□□□ -0.47
CACNA1A-225ENST00000636389 ST20-AS1Q8NBB2 130 aa12.06□□□□□ -0.48
CACNA1A-225ENST00000636389 C11orf72Q8NBR9 251 aa12.06□□□□□ -0.48
CACNA1A-225ENST00000636389 A0A0D9SG42 100 aa12.05□□□□□ -0.48
CACNA1A-225ENST00000636389 RPS28P62857 69 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-225ENST00000636389 NBDYA0A0U1RRE5 68 aa12.05□□□□□ -0.48
CACNA1A-225ENST00000636389 Q6ZRX8 168 aa12.04□□□□□ -0.48
CACNA1A-225ENST00000636389 OBSCN-AS1Q96MR7 158 aa12.04□□□□□ -0.48
CACNA1A-225ENST00000636389 ELOF1P60002 83 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-225ENST00000636389 H3BPC8 53 aa12.03□□□□□ -0.48
CACNA1A-225ENST00000636389 UQCR11O14957 56 aa12.03□□□□□ -0.48
CACNA1A-225ENST00000636389 BCE1O60756 84 aa12.03□□□□□ -0.48
CACNA1A-225ENST00000636389 LUZP6Q538Z0 58 aa12.02□□□□□ -0.48
CACNA1A-225ENST00000636389 RBM12B-AS1Q9P1G2 102 aa12.02□□□□□ -0.48
CACNA1A-225ENST00000636389 IGLV5-37A0A075B6J1 123 aa12.02□□□□□ -0.49
CACNA1A-225ENST00000636389 TM2D3Q9BRN9 247 aa12.02□□□□□ -0.49
CACNA1A-225ENST00000636389 K7EQZ3 153 aa12.02□□□□□ -0.49
CACNA1A-225ENST00000636389 URB1-AS1Q96HZ7 61 aa12.01□□□□□ -0.49
CACNA1A-225ENST00000636389 USP9YO00507 2555 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-225ENST00000636389 SPTBN4Q9H254 2564 aa12.01□□□□□ -0.49
CACNA1A-225ENST00000636389 DSCR10P59022 87 aa12□□□□□ -0.49
CACNA1A-225ENST00000636389 Q6ZQT0 140 aa12□□□□□ -0.49
CACNA1A-225ENST00000636389 LOC101927531A0A1B0GV80 90 aa12□□□□□ -0.49
CACNA1A-225ENST00000636389 MIR22HGQ0VDD5 57 aa12□□□□□ -0.49
CACNA1A-225ENST00000636389 FAM168BA1KXE4 195 aa11.99□□□□□ -0.49
CACNA1A-225ENST00000636389 COA5Q86WW8 74 aa11.99□□□□□ -0.49
CACNA1A-225ENST00000636389 MTORP42345 2549 aa11.97□□□□□ -0.49
CACNA1A-225ENST00000636389 LINC00304Q8N9R0 145 aa11.97□□□□□ -0.49
CACNA1A-225ENST00000636389 BPTFQ12830 3046 aa11.96□□□□□ -0.5
CACNA1A-225ENST00000636389 A8MWP4 228 aa11.96□□□□□ -0.5
CACNA1A-225ENST00000636389 MRPL34Q9BQ48 92 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-225ENST00000636389 TRBV7-4A0A0J9YYF1 115 aa11.95□□□□□ -0.5
CACNA1A-225ENST00000636389 WWC2-AS2Q96NR7 200 aa11.94□□□□□ -0.5
CACNA1A-225ENST00000636389 LINC00588Q9Y4M8 146 aa11.93□□□□□ -0.5
CACNA1A-225ENST00000636389 SMR3BP02814 79 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-225ENST00000636389 FAM218AQ96MZ4 157 aa11.92□□□□□ -0.5
CACNA1A-225ENST00000636389 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
CACNA1A-225ENST00000636389 POLQO75417 2590 aa11.92□□□□□ -0.5
CACNA1A-225ENST00000636389 ZNF575Q86XF7 245 aa11.91□□□□□ -0.5
CACNA1A-225ENST00000636389 A0A1B0GW54 56 aa11.91□□□□□ -0.5
CACNA1A-225ENST00000636389 CSNK1G2-AS1Q8NCQ2 148 aa11.9□□□□□ -0.51
CACNA1A-225ENST00000636389 IGLV5-39A0A0G2JS06 123 aa11.89□□□□□ -0.51
CACNA1A-225ENST00000636389 LINC00310P59036 64 aa11.89□□□□□ -0.51
CACNA1A-225ENST00000636389 USP24Q9UPU5 2620 aa11.88□□□□□ -0.51
CACNA1A-225ENST00000636389 M0R2T5 61 aa11.88□□□□□ -0.51
CACNA1A-225ENST00000636389 LOC110117498A0A087WWA1 95 aa11.87□□□□□ -0.51
CACNA1A-225ENST00000636389 CDC42SE1Q9NRR8 79 aa11.86□□□□□ -0.51
CACNA1A-225ENST00000636389 CYP4F30PQ9H0H9 118 aa11.86□□□□□ -0.51
CACNA1A-225ENST00000636389 A8MUN3 132 aa11.85□□□□□ -0.51
CACNA1A-225ENST00000636389 CD164Q04900 197 aa11.85□□□□□ -0.51
CACNA1A-225ENST00000636389 A0A096LNJ9 63 aa11.84□□□□□ -0.51
CACNA1A-225ENST00000636389 H3BNG1 76 aa11.84□□□□□ -0.51
CACNA1A-225ENST00000636389 COX8CQ7Z4L0 72 aa11.84□□□□□ -0.51
CACNA1A-225ENST00000636389 A0A1W2PPR1 153 aa11.84□□□□□ -0.51
CACNA1A-225ENST00000636389 CHD8Q9HCK8 2581 aa11.83□□□□□ -0.52
CACNA1A-225ENST00000636389 IGLV5-48A0A075B6I7 105 aa11.81□□□□□ -0.52
CACNA1A-225ENST00000636389 ERC2-IT1O76042 136 aa11.81□□□□□ -0.52
CACNA1A-225ENST00000636389 PRO3102Q9H379 93 aa11.8□□□□□ -0.52
CACNA1A-225ENST00000636389 GVQW2A0A096LPI5 108 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms