RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 CYSLTR1Q9Y271 337 aa4.51□□□□□ -1.69
CACNA1A-222ENST00000636022 KRTDAPP60985 99 aa4.5□□□□□ -1.69
CACNA1A-222ENST00000636022 C9orf116Q5BN46 136 aaPredicted RBP4.5□□□□□ -1.69
CACNA1A-222ENST00000636022 REG3GQ6UW15 175 aa4.5□□□□□ -1.69
CACNA1A-222ENST00000636022 PMCHL2Q9BQD1 86 aa4.5□□□□□ -1.69
CACNA1A-222ENST00000636022 TMEM126AQ9H061 195 aa4.5□□□□□ -1.69
CACNA1A-222ENST00000636022 MRPL35Q9NZE8 188 aaKnown RBP4.5□□□□□ -1.69
CACNA1A-222ENST00000636022 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
CACNA1A-222ENST00000636022 MUC2Q02817 5179 aa4.5□□□□□ -1.69
CACNA1A-222ENST00000636022 C10orf25Q5T742 122 aa4.49□□□□□ -1.69
CACNA1A-222ENST00000636022 ATP5L2Q7Z4Y8 100 aa4.49□□□□□ -1.69
CACNA1A-222ENST00000636022 ORMDL3Q8N138 153 aa4.49□□□□□ -1.69
CACNA1A-222ENST00000636022 A0A087WZ39 114 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 A0A1W2PPM0 123 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 F8W1H4 67 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 RPL24P83731 157 aaKnown RBP4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 RPL18AQ02543 176 aaKnown RBP4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 SLC25A34Q6PIV7 304 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 UNQ6190/PRO20217Q6UXQ8 127 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 TMEM136Q6ZRR5 245 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 C2orf91Q6ZV80 131 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 PHF5AQ7RTV0 110 aaKnown RBP4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 PRELID3AQ96N28 172 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 PYGO1Q9Y3Y4 419 aa4.48□□□□□ -1.69
CACNA1A-222ENST00000636022 IGLV4-3A0A075B6K6 122 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 FAM168BA1KXE4 195 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 NDUFA1O15239 70 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 MT-ND6P03923 174 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 TLX1NBP0CAT3 122 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 LINC00242Q5T6M2 205 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 Q6Q795 121 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 KRTAP11-1Q8IUC1 163 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 KRTAP7-1Q8IUC3 87 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 ANAPC13Q9BS18 74 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 C6orf48Q9UBA6 75 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 SPCS1Q9Y6A9 102 aa4.47□□□□□ -1.69
CACNA1A-222ENST00000636022 MT-ATP8P03928 68 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 IFI27P40305 119 aaPredicted RBP4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 C1orf137Q5JT78 98 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 BAGE3Q86Y29 109 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 TMEM141Q96I45 108 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 MAP1LC3CQ9BXW4 147 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 PRO0461Q9UI25 63 aa4.46□□□□□ -1.7
CACNA1A-222ENST00000636022 LOC389332A0A1B0GUA5 103 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 A0A1B0GX51 115 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 CCDC179H3BU77 68 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 H3BUT2 72 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 IGLV7-43P04211 117 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 UBE2D1P51668 147 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 LINC00173Q6ZV60 143 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 LINC01561Q8N1V8 128 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 Q8N8P6 123 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 GNB1LQ9BYB4 327 aa4.45□□□□□ -1.7
CACNA1A-222ENST00000636022 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 TRBV30A0A0K0K1B3 111 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 IGIPA6NJ69 53 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 SYS1-DBNDD2H3BUS1 97 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 COX8AP10176 69 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 GAGE2EQ4V326 116 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 ZC2HC1BQ5TFG8 222 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 C2orf82Q6UX34 121 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 C2orf66Q6UXQ4 117 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 FAM19A5Q7Z5A7 132 aaPredicted RBP4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 FAM19A3Q7Z5A8 133 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 AMELXQ99217 191 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 MAP1LC3AQ9H492 121 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 GAGE2DQ9UEU5 116 aa4.44□□□□□ -1.7
CACNA1A-222ENST00000636022 E9PLD3 99 aa4.43□□□□□ -1.7
CACNA1A-222ENST00000636022 NDUFC2-KCTD14E9PQ53 114 aa4.43□□□□□ -1.7
CACNA1A-222ENST00000636022 FABP2P12104 132 aa4.43□□□□□ -1.7
CACNA1A-222ENST00000636022 C9orf129Q5T035 196 aaKnown RBP4.43□□□□□ -1.7
CACNA1A-222ENST00000636022 DIRC1Q969H9 104 aa4.43□□□□□ -1.7
CACNA1A-222ENST00000636022 H0Y9J4 135 aa4.42□□□□□ -1.7
CACNA1A-222ENST00000636022 K7EMI3 77 aa4.42□□□□□ -1.7
CACNA1A-222ENST00000636022 KRTAP1-4P0C5Y4 121 aa4.42□□□□□ -1.7
CACNA1A-222ENST00000636022 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
CACNA1A-222ENST00000636022 ORMDL2Q53FV1 153 aa4.42□□□□□ -1.7
CACNA1A-222ENST00000636022 ATOH7Q8N100 152 aa4.42□□□□□ -1.7
CACNA1A-222ENST00000636022 SPANXCQ9NY87 97 aa4.42□□□□□ -1.7
CACNA1A-222ENST00000636022 H3BS24 57 aa4.41□□□□□ -1.7
CACNA1A-222ENST00000636022 Q8IZM0 81 aa4.41□□□□□ -1.7
CACNA1A-222ENST00000636022 PRR26Q8N8Z3 221 aa4.41□□□□□ -1.7
CACNA1A-222ENST00000636022 NXT2Q9NPJ8 142 aaKnown RBP4.41□□□□□ -1.7
CACNA1A-222ENST00000636022 SEC61GP60059 68 aa4.4□□□□□ -1.71
CACNA1A-222ENST00000636022 UBE2BP63146 152 aa4.4□□□□□ -1.71
CACNA1A-222ENST00000636022 OR13C6PQ8NH95 151 aa4.4□□□□□ -1.71
CACNA1A-222ENST00000636022 TOMM6Q96B49 74 aa4.4□□□□□ -1.71
CACNA1A-222ENST00000636022 TIMM17AQ99595 171 aa4.4□□□□□ -1.71
CACNA1A-222ENST00000636022 NAA38Q9BRA0 125 aaKnown RBP4.4□□□□□ -1.71
CACNA1A-222ENST00000636022 TP73-AS1Q9UF72 201 aa4.4□□□□□ -1.71
CACNA1A-222ENST00000636022 CDKN2A-AS1Q9UH64 79 aa4.4□□□□□ -1.71
CACNA1A-222ENST00000636022 H3BMG7 143 aa4.39□□□□□ -1.71
CACNA1A-222ENST00000636022 PRSS2P07478 247 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms