RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 AMELXQ99217 191 aa4.46□□□□□ -1.7
GABRB3-218ENST00000635994 IGLV4-60A0A075B6I1 120 aa4.46□□□□□ -1.7
GABRB3-218ENST00000635994 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
GABRB3-218ENST00000635994 CXCL6P80162 114 aa4.46□□□□□ -1.7
GABRB3-218ENST00000635994 SPAG11AQ6PDA7 123 aa4.46□□□□□ -1.7
GABRB3-218ENST00000635994 Q6ZRU5 148 aa4.46□□□□□ -1.7
GABRB3-218ENST00000635994 Q8N3U1 123 aa4.46□□□□□ -1.7
GABRB3-218ENST00000635994 NCOA6Q14686 2063 aaPredicted RBP4.45□□□□□ -1.7
GABRB3-218ENST00000635994 NBDYA0A0U1RRE5 68 aa4.45□□□□□ -1.7
GABRB3-218ENST00000635994 PRLHP81277 87 aa4.45□□□□□ -1.7
GABRB3-218ENST00000635994 PTPRBP23467 1997 aa4.45□□□□□ -1.7
GABRB3-218ENST00000635994 RTL8CO15255 209 aa4.44□□□□□ -1.7
GABRB3-218ENST00000635994 BCE1O60756 84 aa4.44□□□□□ -1.7
GABRB3-218ENST00000635994 MOBPQ13875 183 aa4.44□□□□□ -1.7
GABRB3-218ENST00000635994 COX8CQ7Z4L0 72 aa4.44□□□□□ -1.7
GABRB3-218ENST00000635994 USP9YO00507 2555 aaPredicted RBP4.44□□□□□ -1.7
GABRB3-218ENST00000635994 LINC00313P59037 77 aa4.44□□□□□ -1.7
GABRB3-218ENST00000635994 RPL37AP61513 92 aaKnown RBP4.43□□□□□ -1.7
GABRB3-218ENST00000635994 TMEM254Q8TBM7 123 aa4.43□□□□□ -1.7
GABRB3-218ENST00000635994 FASNP49327 2511 aaKnown RBP4.43□□□□□ -1.7
GABRB3-218ENST00000635994 PIEZO2Q9H5I5 2752 aa4.42□□□□□ -1.7
GABRB3-218ENST00000635994 LINC00336Q6ZUF6 198 aa4.42□□□□□ -1.7
GABRB3-218ENST00000635994 C6orf48Q9UBA6 75 aa4.42□□□□□ -1.7
GABRB3-218ENST00000635994 TRANK1O15050 2925 aa4.42□□□□□ -1.7
GABRB3-218ENST00000635994 KIAA0087Q14695 138 aa4.41□□□□□ -1.7
GABRB3-218ENST00000635994 TRAV22A0A0B4J277 110 aa4.41□□□□□ -1.7
GABRB3-218ENST00000635994 LOC101927531A0A1B0GV80 90 aa4.41□□□□□ -1.7
GABRB3-218ENST00000635994 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
GABRB3-218ENST00000635994 LINC00167Q96N53 147 aa4.41□□□□□ -1.7
GABRB3-218ENST00000635994 IGF2RP11717 2491 aa4.41□□□□□ -1.7
GABRB3-218ENST00000635994 MED12LQ86YW9 2145 aa4.4□□□□□ -1.7
GABRB3-218ENST00000635994 A0A087WYN8 130 aa4.4□□□□□ -1.7
GABRB3-218ENST00000635994 PRM2P04554 102 aa4.4□□□□□ -1.71
GABRB3-218ENST00000635994 LINC00315P59091 139 aa4.4□□□□□ -1.71
GABRB3-218ENST00000635994 CHD9Q3L8U1 2897 aa4.4□□□□□ -1.71
GABRB3-218ENST00000635994 ZFHX3Q15911 3703 aa4.4□□□□□ -1.71
GABRB3-218ENST00000635994 YPEL4Q96NS1 127 aa4.4□□□□□ -1.71
GABRB3-218ENST00000635994 CDIP1Q9H305 208 aa4.4□□□□□ -1.71
GABRB3-218ENST00000635994 Q6ZPA2 131 aa4.39□□□□□ -1.71
GABRB3-218ENST00000635994 C11orf72Q8NBR9 251 aa4.39□□□□□ -1.71
GABRB3-218ENST00000635994 SPTBN4Q9H254 2564 aa4.39□□□□□ -1.71
GABRB3-218ENST00000635994 C2orf91Q6ZV80 131 aa4.39□□□□□ -1.71
GABRB3-218ENST00000635994 SPATA3Q8NHX4 192 aa4.38□□□□□ -1.71
GABRB3-218ENST00000635994 POLQO75417 2590 aa4.38□□□□□ -1.71
GABRB3-218ENST00000635994 PRR3P79522 188 aaKnown RBP4.38□□□□□ -1.71
GABRB3-218ENST00000635994 RBM12B-AS1Q9P1G2 102 aa4.38□□□□□ -1.71
GABRB3-218ENST00000635994 DCHS1Q96JQ0 3298 aa4.38□□□□□ -1.71
GABRB3-218ENST00000635994 KRTAP24-1Q3LI83 254 aa4.38□□□□□ -1.71
GABRB3-218ENST00000635994 SOSTDC1Q6X4U4 206 aa4.38□□□□□ -1.71
GABRB3-218ENST00000635994 CRIP3Q6Q6R5 217 aa4.37□□□□□ -1.71
GABRB3-218ENST00000635994 A0A1W2PPR1 153 aa4.37□□□□□ -1.71
GABRB3-218ENST00000635994 SSBP3-AS1Q7Z2R9 100 aa4.37□□□□□ -1.71
GABRB3-218ENST00000635994 Q96NJ1 140 aa4.37□□□□□ -1.71
GABRB3-218ENST00000635994 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
GABRB3-218ENST00000635994 Q6ZRX8 168 aa4.37□□□□□ -1.71
GABRB3-218ENST00000635994 ASPMQ8IZT6 3477 aa4.36□□□□□ -1.71
GABRB3-218ENST00000635994 DEFB116Q30KQ4 102 aa4.36□□□□□ -1.71
GABRB3-218ENST00000635994 GVQW2A0A096LPI5 108 aaPredicted RBP4.36□□□□□ -1.71
GABRB3-218ENST00000635994 IGHV3OR16-9A0A0B4J2B5 98 aa4.36□□□□□ -1.71
GABRB3-218ENST00000635994 ELOF1P60002 83 aaKnown RBP4.36□□□□□ -1.71
GABRB3-218ENST00000635994 EPM2AB3EWF7 344 aa4.35□□□□□ -1.71
GABRB3-218ENST00000635994 PSPHP1O15172 72 aa4.35□□□□□ -1.71
GABRB3-218ENST00000635994 LINC00304Q8N9R0 145 aa4.35□□□□□ -1.71
GABRB3-218ENST00000635994 WDFY4Q6ZS81 3184 aa4.35□□□□□ -1.71
GABRB3-218ENST00000635994 CHD7Q9P2D1 2997 aa4.35□□□□□ -1.71
GABRB3-218ENST00000635994 ARHGAP21Q5T5U3 1957 aa4.35□□□□□ -1.71
GABRB3-218ENST00000635994 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
GABRB3-218ENST00000635994 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
GABRB3-218ENST00000635994 A0A087WVE0 104 aa4.34□□□□□ -1.71
GABRB3-218ENST00000635994 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
GABRB3-218ENST00000635994 ADAMTSL4-AS1Q5T5F5 129 aa4.34□□□□□ -1.71
GABRB3-218ENST00000635994 BSNQ9UPA5 3926 aa4.34□□□□□ -1.72
GABRB3-218ENST00000635994 PHF5AQ7RTV0 110 aaKnown RBP4.34□□□□□ -1.72
GABRB3-218ENST00000635994 SMIM29Q86T20 159 aa4.34□□□□□ -1.72
GABRB3-218ENST00000635994 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.72
GABRB3-218ENST00000635994 CPAMD8Q8IZJ3 1885 aa4.34□□□□□ -1.72
GABRB3-218ENST00000635994 TRBV7-4A0A0J9YYF1 115 aa4.33□□□□□ -1.72
GABRB3-218ENST00000635994 GAS8-AS1O95177 125 aa4.33□□□□□ -1.72
GABRB3-218ENST00000635994 Q6ZSN1 163 aa4.33□□□□□ -1.72
GABRB3-218ENST00000635994 ST20-AS1Q8NBB2 130 aa4.33□□□□□ -1.72
GABRB3-218ENST00000635994 TSPEAR-AS2P59090 65 aa4.32□□□□□ -1.72
GABRB3-218ENST00000635994 LINC00588Q9Y4M8 146 aa4.32□□□□□ -1.72
GABRB3-218ENST00000635994 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
GABRB3-218ENST00000635994 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
GABRB3-218ENST00000635994 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
GABRB3-218ENST00000635994 LINC00846Q9NV44 126 aa4.32□□□□□ -1.72
GABRB3-218ENST00000635994 FRYLO94915 3013 aa4.31□□□□□ -1.72
GABRB3-218ENST00000635994 IGLV5-45A0A087WSX0 123 aa4.31□□□□□ -1.72
GABRB3-218ENST00000635994 A8MWP4 228 aa4.31□□□□□ -1.72
GABRB3-218ENST00000635994 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
GABRB3-218ENST00000635994 SERTAD4-AS1Q5TG53 156 aa4.3□□□□□ -1.72
GABRB3-218ENST00000635994 Q8NAQ8 132 aa4.3□□□□□ -1.72
GABRB3-218ENST00000635994 TRIOO75962 3097 aa4.3□□□□□ -1.72
GABRB3-218ENST00000635994 UQCR11O14957 56 aa4.29□□□□□ -1.72
GABRB3-218ENST00000635994 VPREB1P12018 145 aa4.29□□□□□ -1.72
GABRB3-218ENST00000635994 PCNX3Q9H6A9 2034 aa4.29□□□□□ -1.72
GABRB3-218ENST00000635994 TET2Q6N021 2002 aaPredicted RBP4.29□□□□□ -1.72
GABRB3-218ENST00000635994 ZNF861PO60384 105 aa4.28□□□□□ -1.72
GABRB3-218ENST00000635994 LINC01600Q96MT4 127 aa4.28□□□□□ -1.72
GABRB3-218ENST00000635994 A8MTW9 85 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms