RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 LINC01554Q52M75 96 aa2.16□□□□□ -2.06
TRAPPC9-216ENST00000634178 C7orf65Q6ZTY9 151 aa2.16□□□□□ -2.06
TRAPPC9-216ENST00000634178 STX12Q86Y82 276 aa2.16□□□□□ -2.06
TRAPPC9-216ENST00000634178 OR13C6PQ8NH95 151 aa2.16□□□□□ -2.06
TRAPPC9-216ENST00000634178 NPVFQ9HCQ7 196 aa2.16□□□□□ -2.06
TRAPPC9-216ENST00000634178 TMEM14CQ9P0S9 112 aa2.16□□□□□ -2.06
TRAPPC9-216ENST00000634178 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
TRAPPC9-216ENST00000634178 SSPOA2VEC9 5147 aa2.15□□□□□ -2.06
TRAPPC9-216ENST00000634178 TRAV21A0A0B4J279 112 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 TRBV10-1A0A0K0K1A3 114 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 A8MWV9 139 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 ANGP03950 147 aaKnown RBP2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 ZNF345Q14585 488 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 RHEBQ15382 184 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 ASB16-AS1Q495Z4 193 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 SPANXN5Q5MJ07 72 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 C10orf113Q5VZT2 155 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 KRTAP13-1Q8IUC0 172 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 OR5A1Q8NGJ0 315 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 GGACTQ9BVM4 153 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 EPDR1Q9UM22 224 aa2.15□□□□□ -2.07
TRAPPC9-216ENST00000634178 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 IGKV2-40A0A087WW87 121 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 TRBV6-8A0A0A6YYG3 113 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 SMIM31A0A1B0GVY4 71 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 TMEM238C9JI98 176 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 IGKV2D-40P01614 121 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 CD3DP04234 171 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 IAPPP10997 89 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 UBE2D1P51668 147 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 VBP1P61758 197 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 SSBP1Q04837 148 aaKnown RBP2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 SCGB2B2Q4G0G5 96 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 AKR1C8PQ5T2L2 129 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 TMEM229BQ8NBD8 167 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 PFDN5Q99471 154 aa2.14□□□□□ -2.07
TRAPPC9-216ENST00000634178 TRBV7-3A0A075B6L6 115 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 A0A096LNI7 61 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 C1orf196B1AJZ1 125 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 TMEM262E9PQX1 116 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 UBE2D3P61077 147 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 UBE2D2P62837 147 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 EIF5AP63241 154 aaKnown RBP2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 MT1HP80294 61 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 TMEM14EPQ6UXP3 125 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 COA5Q86WW8 74 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 EXOC3-AS1Q8N2X6 119 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 HIST1H2BLQ99880 126 aa2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 LYRM2Q9NU23 88 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 PAIP2BQ9ULR5 123 aaKnown RBP2.13□□□□□ -2.07
TRAPPC9-216ENST00000634178 GVQW2A0A096LPI5 108 aaPredicted RBP2.12□□□□□ -2.07
TRAPPC9-216ENST00000634178 FAM24AA6NFZ4 105 aa2.12□□□□□ -2.07
TRAPPC9-216ENST00000634178 MT-ND6P03923 174 aa2.12□□□□□ -2.07
TRAPPC9-216ENST00000634178 RNASE3P12724 160 aaKnown RBP2.12□□□□□ -2.07
TRAPPC9-216ENST00000634178 IZUMO2Q6UXV1 221 aa2.12□□□□□ -2.07
TRAPPC9-216ENST00000634178 LINC00269Q8N2A0 174 aa2.12□□□□□ -2.07
TRAPPC9-216ENST00000634178 TSKUQ8WUA8 353 aa2.12□□□□□ -2.07
TRAPPC9-216ENST00000634178 MGST2Q99735 147 aa2.12□□□□□ -2.07
TRAPPC9-216ENST00000634178 NBEAP1P0C6P0 100 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 DEFA3P59666 94 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 S100A10P60903 97 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 KRTAP19-2Q3LHN2 52 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 C1orf137Q5JT78 98 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 TRIQKQ629K1 86 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 SNX29P2Q8IUI4 249 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 OR2T35Q8NGX2 323 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 COMMD3Q9UBI1 195 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 USH2AO75445 5202 aa2.11□□□□□ -2.07
TRAPPC9-216ENST00000634178 PYYP10082 97 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 RRAS2P62070 204 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 MRPS10P82664 201 aaKnown RBP2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 IQCJQ1A5X6 159 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 Q1T7F1 81 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 PCOTHQ58A44 107 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 TMEM128Q5BJH2 165 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 Q6ZQT0 140 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 FAM167A-AS1Q96KT0 104 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 BIN3Q9NQY0 253 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 PSENENQ9NZ42 101 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 OR5AC2Q9NZP5 309 aa2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 FLGP20930 4061 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC9-216ENST00000634178 TRBV25-1A0A075B6N4 114 aa2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 LOC107984640A0A0U1RRK4 108 aa2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 BAALC-AS2P0C853 105 aa2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 AKAIN1P0CW23 69 aa2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 G0S2P27469 103 aa2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 MIC13Q5XKP0 118 aa2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 CLPSL2Q6UWE3 100 aa2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 FP248Q71RG6 208 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 SCP2D1Q9UJQ7 156 aa2.09□□□□□ -2.07
TRAPPC9-216ENST00000634178 TRBV6-1A0A0K0K1D8 114 aa2.08□□□□□ -2.08
TRAPPC9-216ENST00000634178 RAB4BP61018 213 aa2.08□□□□□ -2.08
TRAPPC9-216ENST00000634178 GNG5P63218 68 aa2.08□□□□□ -2.08
TRAPPC9-216ENST00000634178 C9orf116Q5BN46 136 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC9-216ENST00000634178 FAM74A1Q5RGS3 127 aa2.08□□□□□ -2.08
TRAPPC9-216ENST00000634178 SMIM4Q8WVI0 70 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms