RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 FAM236CP0DP71 79 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 GCHFRP30047 84 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 CXCL5P42830 114 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 AKR1D1P51857 326 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 SYCNQ0VAF6 134 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 SMIM20Q8N5G0 67 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 IMMP2LQ96T52 175 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 TIMM17AQ99595 171 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 NDFIP1Q9BT67 221 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 SMIM3Q9BZL3 60 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 SMCO4Q9NRQ5 59 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 CYTL1Q9NRR1 136 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 SPANXB1Q9NS25 103 aaPredicted RBP1.62□□□□□ -2.15
CDKL5-208ENST00000624953 LINC00474Q9P2X8 69 aa1.62□□□□□ -2.15
CDKL5-208ENST00000624953 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.61□□□□□ -2.15
CDKL5-208ENST00000624953 LOC107984640A0A0U1RRK4 108 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 LINC00959A0A1B0GUT2 108 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 IGKV2-29A2NJV5 120 aaPredicted RBP1.61□□□□□ -2.15
CDKL5-208ENST00000624953 MAP1LC3B2A6NCE7 125 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 ZNF727A8MUV8 499 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 G3V3Q6 166 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 CCL25O15444 150 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 LTAP01374 205 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 CRYGAP11844 174 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 XCL1P47992 114 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 UBE2D1P51668 147 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 LINC00313P59037 77 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 RAB5BP61020 215 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 PKIAP61925 76 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 JOSD1Q15040 202 aaPredicted RBP1.61□□□□□ -2.15
CDKL5-208ENST00000624953 TMEM241Q24JQ0 296 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 ORMDL2Q53FV1 153 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 TMEM97Q5BJF2 176 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 Q5BKY6 102 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 BORCS7Q96B45 105 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 MAP1LC3BQ9GZQ8 125 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 RNASE7Q9H1E1 156 aaKnown RBP1.61□□□□□ -2.15
CDKL5-208ENST00000624953 C8orf17Q9NRJ1 99 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 GNG13Q9P2W3 67 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 SS18L2Q9UHA2 77 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 NAT8Q9UHE5 227 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 ZFP30Q9Y2G7 519 aa1.61□□□□□ -2.15
CDKL5-208ENST00000624953 IGHV1-58A0A0C4DH39 117 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 APOMO95445 188 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 PPP1R17O96001 155 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 APOC3P02656 99 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 IGLC6P0CF74 106 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 FGF6P10767 208 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 NTF3P20783 257 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 NMUP48645 174 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 GNG4P50150 75 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 RPS20P60866 119 aaKnown RBP1.6□□□□□ -2.15
CDKL5-208ENST00000624953 HERVK_113P61574 105 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 UBE2G1P62253 170 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 CCL20P78556 96 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 MOBPQ13875 183 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 SS18Q15532 418 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 CENPWQ5EE01 88 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 COA6Q5JTJ3 125 aaKnown RBP1.6□□□□□ -2.15
CDKL5-208ENST00000624953 C10orf91Q5T1B1 145 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 RASL11AQ6T310 242 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 SMIM15Q7Z3B0 74 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 ADM2Q7Z4H4 148 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 OR5A1Q8NGJ0 315 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 SIGMAR1Q99720 223 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 SMIM7Q9BQ49 75 aa1.6□□□□□ -2.15
CDKL5-208ENST00000624953 LINC01549A6NIU2 74 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 A8MWL6 223 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 F2Z2F3 143 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 TCAPO15273 167 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 MGPP08493 103 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 CXCL1P09341 107 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 LINC00614P0C842 121 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 AKR1C3P42330 323 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 PSMB2P49721 201 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 MP68P56378 58 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 PMAIP1Q13794 54 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 RNASE13Q5GAN3 156 aaKnown RBP1.59□□□□□ -2.15
CDKL5-208ENST00000624953 ATP5L2Q7Z4Y8 100 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 LINC01551Q86U37 167 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 BAGE2Q86Y30 109 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 KRTAP13-1Q8IUC0 172 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 OR2D3Q8NGH3 330 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 TSKUQ8WUA8 353 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 RPL39LQ96EH5 51 aaKnown RBP1.59□□□□□ -2.15
CDKL5-208ENST00000624953 NIT2Q9NQR4 276 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 C6orf48Q9UBA6 75 aa1.59□□□□□ -2.15
CDKL5-208ENST00000624953 C1orf196B1AJZ1 125 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 UBE2L6O14933 153 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 SRP19P09132 144 aaKnown RBP1.58□□□□□ -2.16
CDKL5-208ENST00000624953 RPL35P42766 123 aaKnown RBP1.58□□□□□ -2.16
CDKL5-208ENST00000624953 FOXA3P55318 350 aaPredicted RBP1.58□□□□□ -2.16
CDKL5-208ENST00000624953 ADIRFQ15847 76 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 SPANXN1Q5VSR9 72 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 UNQ6190/PRO20217Q6UXQ8 127 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 C3orf22Q8N5N4 141 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.58□□□□□ -2.16
CDKL5-208ENST00000624953 LINC00304Q8N9R0 145 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 AP1S3Q96PC3 154 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms