RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
CBWD3-219ENST00000622817 Q6ZRU5 148 aa4.6□□□□□ -1.67
CBWD3-219ENST00000622817 PLECQ15149 4684 aaKnown RBP4.59□□□□□ -1.67
CBWD3-219ENST00000622817 LOC107984156A0A0G2JMH3 177 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 C9orf118A6NHY6 69 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 M0R2N4 97 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 LY6G6CO95867 125 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 RNF151Q2KHN1 245 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 C14orf177Q52M58 125 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 Q6ZR54 194 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 ARL17AQ8IVW1 177 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 LINC00476Q8WZB0 136 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 SND1-IT1Q9HBX3 110 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 PRO1854Q9UHT4 67 aa4.59□□□□□ -1.67
CBWD3-219ENST00000622817 A0A1B0GV90 55 aa4.58□□□□□ -1.68
CBWD3-219ENST00000622817 LECT2O14960 151 aa4.58□□□□□ -1.68
CBWD3-219ENST00000622817 CARD19Q96LW7 228 aa4.58□□□□□ -1.68
CBWD3-219ENST00000622817 Q6ZRN7 208 aaPredicted RBP4.58□□□□□ -1.68
CBWD3-219ENST00000622817 NDUFC2-KCTD14E9PQ53 114 aa4.57□□□□□ -1.68
CBWD3-219ENST00000622817 H3BUT2 72 aa4.57□□□□□ -1.68
CBWD3-219ENST00000622817 WFDC2Q14508 124 aa4.57□□□□□ -1.68
CBWD3-219ENST00000622817 LYSTQ99698 3801 aa4.57□□□□□ -1.68
CBWD3-219ENST00000622817 TRAV13-2A0A0B4J235 113 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 NDUFC2O95298 119 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 SLPIP03973 132 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 CNBPP62633 177 aaKnown RBP4.56□□□□□ -1.68
CBWD3-219ENST00000622817 A0A1W2PPM0 123 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 LRCOL1A6NCL2 159 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 TSPAN13O95857 204 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 TLX1NBP0CAT3 122 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 FABP2P12104 132 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 RPL13AP40429 203 aaKnown RBP4.56□□□□□ -1.68
CBWD3-219ENST00000622817 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
CBWD3-219ENST00000622817 NAA38Q9BRA0 125 aaKnown RBP4.56□□□□□ -1.68
CBWD3-219ENST00000622817 IGKV2-28A0A075B6P5 120 aa4.55□□□□□ -1.68
CBWD3-219ENST00000622817 H7C2G1 150 aa4.55□□□□□ -1.68
CBWD3-219ENST00000622817 IGKV2D-28P01615 120 aa4.55□□□□□ -1.68
CBWD3-219ENST00000622817 VAMP3Q15836 100 aa4.55□□□□□ -1.68
CBWD3-219ENST00000622817 Q1RN00 199 aa4.55□□□□□ -1.68
CBWD3-219ENST00000622817 C1orf134Q5TEV5 83 aa4.55□□□□□ -1.68
CBWD3-219ENST00000622817 VPS13DQ5THJ4 4388 aa4.55□□□□□ -1.68
CBWD3-219ENST00000622817 LOC107984640A0A0U1RRK4 108 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 GAGE2EQ4V326 116 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 Q6ZRP5 223 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 XAGE1AQ9HD64 81 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 DNAH1Q9P2D7 4330 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 PSMB2P49721 201 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 RPL18AQ02543 176 aaKnown RBP4.54□□□□□ -1.68
CBWD3-219ENST00000622817 LYRM7Q5U5X0 104 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 LINC00337Q8N6G1 96 aa4.54□□□□□ -1.68
CBWD3-219ENST00000622817 A0A087WTM6 91 aa4.53□□□□□ -1.68
CBWD3-219ENST00000622817 TRBV10-2A0A0K0K1G8 114 aa4.53□□□□□ -1.68
CBWD3-219ENST00000622817 PRR3P79522 188 aaKnown RBP4.53□□□□□ -1.68
CBWD3-219ENST00000622817 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
CBWD3-219ENST00000622817 PKIGQ9Y2B9 76 aa4.53□□□□□ -1.68
CBWD3-219ENST00000622817 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.52□□□□□ -1.69
CBWD3-219ENST00000622817 SCGB1C2P0DMR2 95 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 GTF2H5Q6ZYL4 71 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 Q8N814 137 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 OR13C6PQ8NH95 151 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 SPCS1Q9Y6A9 102 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 ALMS1Q8TCU4 4167 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 GAGE10A6NGK3 116 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 K7EP34 96 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 NCR3O14931 201 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 TRIAP1O43715 76 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 COX6CP09669 75 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 C9orf129Q5T035 196 aaKnown RBP4.52□□□□□ -1.69
CBWD3-219ENST00000622817 Q8NDZ9 215 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 TMEM126AQ9H061 195 aa4.52□□□□□ -1.69
CBWD3-219ENST00000622817 VPREB1P12018 145 aa4.51□□□□□ -1.69
CBWD3-219ENST00000622817 RPL28P46779 137 aaKnown RBP4.51□□□□□ -1.69
CBWD3-219ENST00000622817 GAGE2BQ13066 116 aa4.51□□□□□ -1.69
CBWD3-219ENST00000622817 UBE2V1Q13404 147 aa4.51□□□□□ -1.69
CBWD3-219ENST00000622817 S100A7L2Q5SY68 101 aa4.51□□□□□ -1.69
CBWD3-219ENST00000622817 C9orf163Q8N9P6 203 aa4.51□□□□□ -1.69
CBWD3-219ENST00000622817 DNAH6Q9C0G6 4158 aa4.5□□□□□ -1.69
CBWD3-219ENST00000622817 TRBV20-1A0A075B6N2 111 aa4.5□□□□□ -1.69
CBWD3-219ENST00000622817 C16orf90A8MZG2 172 aa4.5□□□□□ -1.69
CBWD3-219ENST00000622817 M0R378 163 aa4.5□□□□□ -1.69
CBWD3-219ENST00000622817 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
CBWD3-219ENST00000622817 IGLV6-57P01721 117 aa4.49□□□□□ -1.69
CBWD3-219ENST00000622817 NKAPP1Q8N9T2 125 aa4.49□□□□□ -1.69
CBWD3-219ENST00000622817 SMIM11BQ8TCY0 68 aa4.49□□□□□ -1.69
CBWD3-219ENST00000622817 IGLV5-37A0A075B6J1 123 aa4.49□□□□□ -1.69
CBWD3-219ENST00000622817 A0A096LNI7 61 aa4.49□□□□□ -1.69
CBWD3-219ENST00000622817 LCE6AA0A183 80 aa4.49□□□□□ -1.69
CBWD3-219ENST00000622817 CBY1Q9Y3M2 126 aa4.49□□□□□ -1.69
CBWD3-219ENST00000622817 TCL1BO95988 128 aa4.48□□□□□ -1.69
CBWD3-219ENST00000622817 SERTAD4-AS1Q5TG53 156 aa4.48□□□□□ -1.69
CBWD3-219ENST00000622817 SDIM1Q6ZPB5 146 aa4.48□□□□□ -1.69
CBWD3-219ENST00000622817 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
CBWD3-219ENST00000622817 LINC00474Q9P2X8 69 aa4.48□□□□□ -1.69
CBWD3-219ENST00000622817 KMT2AQ03164 3969 aa4.48□□□□□ -1.69
CBWD3-219ENST00000622817 IGKV2-24A0A0C4DH68 120 aa4.47□□□□□ -1.69
CBWD3-219ENST00000622817 TRBV10-3A0A0K0K1G6 114 aa4.47□□□□□ -1.69
CBWD3-219ENST00000622817 H0YGX0 51 aa4.47□□□□□ -1.69
CBWD3-219ENST00000622817 RTL8CO15255 209 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms