RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 UBL5Q9BZL1 73 aa6.16□□□□□ -1.42
HDAC9-229ENST00000622668 A0A087WTM6 91 aa6.16□□□□□ -1.42
HDAC9-229ENST00000622668 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-229ENST00000622668 H0Y9J4 135 aa6.16□□□□□ -1.42
HDAC9-229ENST00000622668 REG3GQ6UW15 175 aa6.16□□□□□ -1.42
HDAC9-229ENST00000622668 IGHV3OR16-9A0A0B4J2B5 98 aa6.15□□□□□ -1.42
HDAC9-229ENST00000622668 ZNF73O43830 326 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-229ENST00000622668 PRLHP81277 87 aa6.15□□□□□ -1.42
HDAC9-229ENST00000622668 FBN2P35556 2912 aa6.15□□□□□ -1.43
HDAC9-229ENST00000622668 FXYD2P54710 66 aa6.15□□□□□ -1.43
HDAC9-229ENST00000622668 TRBV10-3A0A0K0K1G6 114 aa6.14□□□□□ -1.43
HDAC9-229ENST00000622668 TNP2Q05952 138 aa6.14□□□□□ -1.43
HDAC9-229ENST00000622668 AMELXQ99217 191 aa6.14□□□□□ -1.43
HDAC9-229ENST00000622668 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
HDAC9-229ENST00000622668 CLEC2BQ92478 149 aa6.14□□□□□ -1.43
HDAC9-229ENST00000622668 Q6ZQY7 126 aa6.13□□□□□ -1.43
HDAC9-229ENST00000622668 F8WDY8 70 aa6.13□□□□□ -1.43
HDAC9-229ENST00000622668 MAPKAPK5-AS1Q8N8E1 139 aa6.13□□□□□ -1.43
HDAC9-229ENST00000622668 DHRS4-AS1Q9P1J3 65 aa6.13□□□□□ -1.43
HDAC9-229ENST00000622668 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
HDAC9-229ENST00000622668 HRNRQ86YZ3 2850 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-229ENST00000622668 A0A087WYN8 130 aa6.12□□□□□ -1.43
HDAC9-229ENST00000622668 SLPIP03973 132 aa6.12□□□□□ -1.43
HDAC9-229ENST00000622668 A0A1B0GV90 55 aa6.12□□□□□ -1.43
HDAC9-229ENST00000622668 NREPQ16612 68 aa6.12□□□□□ -1.43
HDAC9-229ENST00000622668 Q6ZRP5 223 aa6.12□□□□□ -1.43
HDAC9-229ENST00000622668 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
HDAC9-229ENST00000622668 OCIAD2Q56VL3 154 aa6.11□□□□□ -1.43
HDAC9-229ENST00000622668 RBM3P98179 157 aaKnown RBP6.11□□□□□ -1.43
HDAC9-229ENST00000622668 LCE6AA0A183 80 aa6.11□□□□□ -1.43
HDAC9-229ENST00000622668 C10orf25Q5T742 122 aa6.11□□□□□ -1.43
HDAC9-229ENST00000622668 LINC00612Q8N6U2 182 aa6.11□□□□□ -1.43
HDAC9-229ENST00000622668 PKD1L1Q8TDX9 2849 aa6.11□□□□□ -1.43
HDAC9-229ENST00000622668 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
HDAC9-229ENST00000622668 DMDP11532 3685 aa6.1□□□□□ -1.43
HDAC9-229ENST00000622668 HIGD1BQ9P298 99 aa6.1□□□□□ -1.43
HDAC9-229ENST00000622668 TMEM256-PLSCR3K7ERE1 68 aa6.09□□□□□ -1.43
HDAC9-229ENST00000622668 ETDBQ3ZM63 59 aa6.09□□□□□ -1.43
HDAC9-229ENST00000622668 Q8N814 137 aa6.09□□□□□ -1.43
HDAC9-229ENST00000622668 LOC105371267A0A1B0GV96 52 aa6.09□□□□□ -1.43
HDAC9-229ENST00000622668 C9orf118A6NHY6 69 aa6.09□□□□□ -1.43
HDAC9-229ENST00000622668 EPM2AB3EWF7 344 aa6.09□□□□□ -1.43
HDAC9-229ENST00000622668 CDPF1Q6NVV7 123 aa6.09□□□□□ -1.43
HDAC9-229ENST00000622668 TCL1BO95988 128 aa6.08□□□□□ -1.44
HDAC9-229ENST00000622668 TP73-AS1Q9UF72 201 aa6.08□□□□□ -1.44
HDAC9-229ENST00000622668 URB1-AS1Q96HZ7 61 aa6.08□□□□□ -1.44
HDAC9-229ENST00000622668 UPK3BQ9BT76 320 aa6.08□□□□□ -1.44
HDAC9-229ENST00000622668 H3BQ85 93 aa6.08□□□□□ -1.44
HDAC9-229ENST00000622668 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
HDAC9-229ENST00000622668 TIMM17BO60830 172 aa6.07□□□□□ -1.44
HDAC9-229ENST00000622668 ZFHX3Q15911 3703 aa6.07□□□□□ -1.44
HDAC9-229ENST00000622668 TRBV10-2A0A0K0K1G8 114 aa6.07□□□□□ -1.44
HDAC9-229ENST00000622668 LINC01561Q8N1V8 128 aa6.07□□□□□ -1.44
HDAC9-229ENST00000622668 JMJD7-PLA2G4BH0Y9G9 81 aa6.06□□□□□ -1.44
HDAC9-229ENST00000622668 DLEU1O43261 78 aa6.06□□□□□ -1.44
HDAC9-229ENST00000622668 LINC00337Q8N6G1 96 aa6.06□□□□□ -1.44
HDAC9-229ENST00000622668 SMIM11BQ8TCY0 68 aa6.06□□□□□ -1.44
HDAC9-229ENST00000622668 SS18L2Q9UHA2 77 aa6.06□□□□□ -1.44
HDAC9-229ENST00000622668 GVQW2A0A096LPI5 108 aaPredicted RBP6.06□□□□□ -1.44
HDAC9-229ENST00000622668 A0A1W2PPM0 123 aa6.06□□□□□ -1.44
HDAC9-229ENST00000622668 CRYGAP11844 174 aa6.05□□□□□ -1.44
HDAC9-229ENST00000622668 CCKP06307 115 aa6.05□□□□□ -1.44
HDAC9-229ENST00000622668 ZNF575Q86XF7 245 aa6.05□□□□□ -1.44
HDAC9-229ENST00000622668 OTOGQ6ZRI0 2925 aa6.05□□□□□ -1.44
HDAC9-229ENST00000622668 A0A096LNJ9 63 aa6.05□□□□□ -1.44
HDAC9-229ENST00000622668 TSPEAR-AS2P59090 65 aa6.05□□□□□ -1.44
HDAC9-229ENST00000622668 PRR4Q16378 134 aa6.04□□□□□ -1.44
HDAC9-229ENST00000622668 C9orf163Q8N9P6 203 aa6.04□□□□□ -1.44
HDAC9-229ENST00000622668 SMCR5Q8TEV8 140 aa6.04□□□□□ -1.44
HDAC9-229ENST00000622668 TENM3Q9P273 2699 aa6.04□□□□□ -1.44
HDAC9-229ENST00000622668 A0A0B4J2C4 111 aa6.03□□□□□ -1.44
HDAC9-229ENST00000622668 PRYO14603 147 aa6.03□□□□□ -1.44
HDAC9-229ENST00000622668 TYMSOSQ8TAI1 123 aa6.03□□□□□ -1.44
HDAC9-229ENST00000622668 Q9BRP9 147 aa6.03□□□□□ -1.44
HDAC9-229ENST00000622668 SMG1Q96Q15 3661 aaKnown RBP6.03□□□□□ -1.44
HDAC9-229ENST00000622668 LINC00528Q8N1L1 170 aa6.03□□□□□ -1.44
HDAC9-229ENST00000622668 SPACA4Q8TDM5 124 aa6.02□□□□□ -1.45
HDAC9-229ENST00000622668 YPEL4Q96NS1 127 aa6.02□□□□□ -1.45
HDAC9-229ENST00000622668 PRR34Q9NV39 138 aa6.02□□□□□ -1.45
HDAC9-229ENST00000622668 ADAMTSL4-AS1Q5T5F5 129 aa6.02□□□□□ -1.45
HDAC9-229ENST00000622668 FAM19A3Q7Z5A8 133 aa6.02□□□□□ -1.45
HDAC9-229ENST00000622668 C14orf132Q9NPU4 83 aa6.02□□□□□ -1.45
HDAC9-229ENST00000622668 TEX49A0A1B0GTD5 131 aa6.01□□□□□ -1.45
HDAC9-229ENST00000622668 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
HDAC9-229ENST00000622668 FAM168BA1KXE4 195 aa6□□□□□ -1.45
HDAC9-229ENST00000622668 TENM1Q9UKZ4 2725 aa6□□□□□ -1.45
HDAC9-229ENST00000622668 TRIAP1O43715 76 aa6□□□□□ -1.45
HDAC9-229ENST00000622668 TENM2Q9NT68 2774 aa6□□□□□ -1.45
HDAC9-229ENST00000622668 LINC00310P59036 64 aa6□□□□□ -1.45
HDAC9-229ENST00000622668 MOBPQ13875 183 aa6□□□□□ -1.45
HDAC9-229ENST00000622668 PPDPFLQ8WWR9 84 aa6□□□□□ -1.45
HDAC9-229ENST00000622668 IGLV5-39A0A0G2JS06 123 aa5.99□□□□□ -1.45
HDAC9-229ENST00000622668 LST1O00453 97 aa5.99□□□□□ -1.45
HDAC9-229ENST00000622668 PDE6GP18545 87 aa5.99□□□□□ -1.45
HDAC9-229ENST00000622668 BPY2O14599 106 aa5.99□□□□□ -1.45
HDAC9-229ENST00000622668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.99□□□□□ -1.45
HDAC9-229ENST00000622668 K7EP34 96 aa5.98□□□□□ -1.45
HDAC9-229ENST00000622668 C15orf56Q8N910 161 aa5.98□□□□□ -1.45
HDAC9-229ENST00000622668 NDUFC2O95298 119 aa5.98□□□□□ -1.45
HDAC9-229ENST00000622668 NDUFV3P56181 108 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms