RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 LOC100131303A0A0U1RQF7 123 aa4.9□□□□□ -1.63
SRGAP3-213ENST00000618999 TMEM256-PLSCR3K7ERE1 68 aa4.9□□□□□ -1.63
SRGAP3-213ENST00000618999 CLPSL2Q6UWE3 100 aa4.9□□□□□ -1.63
SRGAP3-213ENST00000618999 TRBV6-8A0A0A6YYG3 113 aa4.9□□□□□ -1.63
SRGAP3-213ENST00000618999 FAM19A3Q7Z5A8 133 aa4.9□□□□□ -1.63
SRGAP3-213ENST00000618999 FAM236DA0A1B0GTK5 79 aa4.89□□□□□ -1.63
SRGAP3-213ENST00000618999 FAM236CP0DP71 79 aa4.89□□□□□ -1.63
SRGAP3-213ENST00000618999 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
SRGAP3-213ENST00000618999 ATP5EP2Q5VTU8 51 aa4.89□□□□□ -1.63
SRGAP3-213ENST00000618999 WFDC9Q8NEX5 89 aa4.89□□□□□ -1.63
SRGAP3-213ENST00000618999 IGKV2-28A0A075B6P5 120 aa4.88□□□□□ -1.63
SRGAP3-213ENST00000618999 TRAV23DV6A0A075B6W5 121 aa4.88□□□□□ -1.63
SRGAP3-213ENST00000618999 IGKV2D-28P01615 120 aa4.88□□□□□ -1.63
SRGAP3-213ENST00000618999 IGLV4-60A0A075B6I1 120 aa4.88□□□□□ -1.63
SRGAP3-213ENST00000618999 A0A087WZ39 114 aa4.88□□□□□ -1.63
SRGAP3-213ENST00000618999 CCKP06307 115 aa4.88□□□□□ -1.63
SRGAP3-213ENST00000618999 HAMPP81172 84 aa4.88□□□□□ -1.63
SRGAP3-213ENST00000618999 MRPL55Q7Z7F7 128 aaKnown RBP4.88□□□□□ -1.63
SRGAP3-213ENST00000618999 FBN1P35555 2871 aaKnown RBP4.87□□□□□ -1.63
SRGAP3-213ENST00000618999 GIG44P09565 113 aaPredicted RBP4.87□□□□□ -1.63
SRGAP3-213ENST00000618999 SEC61BP60468 96 aaKnown RBP4.87□□□□□ -1.63
SRGAP3-213ENST00000618999 LINC00959A0A1B0GUT2 108 aa4.87□□□□□ -1.63
SRGAP3-213ENST00000618999 APOC4P55056 127 aa4.87□□□□□ -1.63
SRGAP3-213ENST00000618999 DEFB135Q30KP9 77 aa4.87□□□□□ -1.63
SRGAP3-213ENST00000618999 ENHOQ6UWT2 76 aa4.87□□□□□ -1.63
SRGAP3-213ENST00000618999 NBEAL2Q6ZNJ1 2754 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 A0A096LPF7 62 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 IGHV3OR16-9A0A0B4J2B5 98 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 KIR2DL5BQ8NHK3 375 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 Q6ZVQ6 151 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 C2orf48Q96LS8 159 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 DSCR8Q96T75 97 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 RBM3P98179 157 aaKnown RBP4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 C4orf26Q17RF5 130 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 C20orf197Q8N268 126 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 UPK3BQ9BT76 320 aa4.86□□□□□ -1.63
SRGAP3-213ENST00000618999 ANGP03950 147 aaKnown RBP4.85□□□□□ -1.63
SRGAP3-213ENST00000618999 NDUFC2O95298 119 aa4.85□□□□□ -1.63
SRGAP3-213ENST00000618999 IGHV4-30-4P0DP06 118 aa4.85□□□□□ -1.63
SRGAP3-213ENST00000618999 DEFB4AO15263 64 aa4.85□□□□□ -1.63
SRGAP3-213ENST00000618999 Q8IZM0 81 aa4.85□□□□□ -1.63
SRGAP3-213ENST00000618999 Q8N814 137 aa4.85□□□□□ -1.63
SRGAP3-213ENST00000618999 PRR26Q8N8Z3 221 aa4.85□□□□□ -1.63
SRGAP3-213ENST00000618999 IGLV10-54A0A075B6I4 117 aa4.84□□□□□ -1.63
SRGAP3-213ENST00000618999 C6orf99Q4VX62 202 aa4.84□□□□□ -1.63
SRGAP3-213ENST00000618999 REG3GQ6UW15 175 aa4.84□□□□□ -1.63
SRGAP3-213ENST00000618999 NOTCH1P46531 2555 aa4.84□□□□□ -1.63
SRGAP3-213ENST00000618999 CSNK1G2-AS1Q8NCQ2 148 aa4.84□□□□□ -1.64
SRGAP3-213ENST00000618999 TRRAPQ9Y4A5 3859 aa4.84□□□□□ -1.64
SRGAP3-213ENST00000618999 C9orf129Q5T035 196 aaKnown RBP4.83□□□□□ -1.64
SRGAP3-213ENST00000618999 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
SRGAP3-213ENST00000618999 MGAM2Q2M2H8 2515 aa4.83□□□□□ -1.64
SRGAP3-213ENST00000618999 PRR3P79522 188 aaKnown RBP4.83□□□□□ -1.64
SRGAP3-213ENST00000618999 FHL2Q14192 279 aa4.83□□□□□ -1.64
SRGAP3-213ENST00000618999 DPH3Q96FX2 82 aa4.83□□□□□ -1.64
SRGAP3-213ENST00000618999 PRB2P02812 416 aaPredicted RBP4.82□□□□□ -1.64
SRGAP3-213ENST00000618999 PRO0255Q9UI72 69 aa4.82□□□□□ -1.64
SRGAP3-213ENST00000618999 C22orf24Q9Y442 160 aa4.82□□□□□ -1.64
SRGAP3-213ENST00000618999 KRTAP10-11P60412 298 aa4.82□□□□□ -1.64
SRGAP3-213ENST00000618999 FAM19A1Q7Z5A9 133 aa4.82□□□□□ -1.64
SRGAP3-213ENST00000618999 LINC00269Q8N2A0 174 aa4.82□□□□□ -1.64
SRGAP3-213ENST00000618999 COX17Q14061 63 aa4.82□□□□□ -1.64
SRGAP3-213ENST00000618999 HTN3P15516 51 aa4.81□□□□□ -1.64
SRGAP3-213ENST00000618999 PDE6GP18545 87 aa4.81□□□□□ -1.64
SRGAP3-213ENST00000618999 CHCHD10Q8WYQ3 142 aaPredicted RBP4.81□□□□□ -1.64
SRGAP3-213ENST00000618999 NDUFC2-KCTD14E9PQ53 114 aa4.81□□□□□ -1.64
SRGAP3-213ENST00000618999 OBSCN-AS1Q96MR7 158 aa4.81□□□□□ -1.64
SRGAP3-213ENST00000618999 H3BQ85 93 aa4.81□□□□□ -1.64
SRGAP3-213ENST00000618999 SPAG11BQ08648 103 aa4.81□□□□□ -1.64
SRGAP3-213ENST00000618999 IGHV4-28A0A0C4DH34 117 aa4.8□□□□□ -1.64
SRGAP3-213ENST00000618999 TRBV10-3A0A0K0K1G6 114 aa4.8□□□□□ -1.64
SRGAP3-213ENST00000618999 REG3AQ06141 175 aa4.8□□□□□ -1.64
SRGAP3-213ENST00000618999 Q75L30 129 aa4.8□□□□□ -1.64
SRGAP3-213ENST00000618999 A0A1B0GUV1 79 aa4.8□□□□□ -1.64
SRGAP3-213ENST00000618999 PLAC8L1A1L4L8 177 aa4.8□□□□□ -1.64
SRGAP3-213ENST00000618999 DAD1P61803 113 aa4.8□□□□□ -1.64
SRGAP3-213ENST00000618999 DIRC1Q969H9 104 aa4.79□□□□□ -1.64
SRGAP3-213ENST00000618999 TRAV7A0A075B6U4 112 aa4.79□□□□□ -1.64
SRGAP3-213ENST00000618999 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
SRGAP3-213ENST00000618999 Q6ZQY7 126 aa4.79□□□□□ -1.64
SRGAP3-213ENST00000618999 PKD1L1Q8TDX9 2849 aa4.79□□□□□ -1.64
SRGAP3-213ENST00000618999 MIFP14174 115 aa4.78□□□□□ -1.64
SRGAP3-213ENST00000618999 EGFEM1PQ0D2K5 195 aa4.78□□□□□ -1.64
SRGAP3-213ENST00000618999 LINC00575Q6W349 94 aa4.78□□□□□ -1.64
SRGAP3-213ENST00000618999 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
SRGAP3-213ENST00000618999 LYRM9A8MSI8 78 aa4.78□□□□□ -1.65
SRGAP3-213ENST00000618999 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
SRGAP3-213ENST00000618999 MUC7Q8TAX7 377 aa4.77□□□□□ -1.65
SRGAP3-213ENST00000618999 CYSTM1Q9H1C7 97 aa4.77□□□□□ -1.65
SRGAP3-213ENST00000618999 SNURFQ9Y675 71 aa4.77□□□□□ -1.65
SRGAP3-213ENST00000618999 LINC01547P58512 204 aaPredicted RBP4.76□□□□□ -1.65
SRGAP3-213ENST00000618999 SERP1Q9Y6X1 66 aa4.76□□□□□ -1.65
SRGAP3-213ENST00000618999 COX7BP24311 80 aa4.76□□□□□ -1.65
SRGAP3-213ENST00000618999 SCXQ7RTU7 201 aa4.76□□□□□ -1.65
SRGAP3-213ENST00000618999 LINC00167Q96N53 147 aa4.76□□□□□ -1.65
SRGAP3-213ENST00000618999 UNQ6190/PRO20217Q6UXQ8 127 aa4.76□□□□□ -1.65
SRGAP3-213ENST00000618999 Q8NAQ8 132 aa4.76□□□□□ -1.65
SRGAP3-213ENST00000618999 KLK12Q9UKR0 248 aa4.76□□□□□ -1.65
SRGAP3-213ENST00000618999 CELA1Q9UNI1 258 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms