RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 NDUFC2O95298 119 aa11.09□□□□□ -0.63
TRAPPC3-210ENST00000617904 SCGB1C2P0DMR2 95 aa11.09□□□□□ -0.63
TRAPPC3-210ENST00000617904 TSPAN13O95857 204 aa11.08□□□□□ -0.64
TRAPPC3-210ENST00000617904 LINC00526Q96FQ7 95 aa11.08□□□□□ -0.64
TRAPPC3-210ENST00000617904 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
TRAPPC3-210ENST00000617904 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
TRAPPC3-210ENST00000617904 H7C2G1 150 aa11.07□□□□□ -0.64
TRAPPC3-210ENST00000617904 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
TRAPPC3-210ENST00000617904 C10orf25Q5T742 122 aa11.07□□□□□ -0.64
TRAPPC3-210ENST00000617904 Q6ZRU5 148 aa11.07□□□□□ -0.64
TRAPPC3-210ENST00000617904 CBY1Q9Y3M2 126 aa11.07□□□□□ -0.64
TRAPPC3-210ENST00000617904 SOSTDC1Q6X4U4 206 aa11.06□□□□□ -0.64
TRAPPC3-210ENST00000617904 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
TRAPPC3-210ENST00000617904 KIAA1109Q2LD37 5005 aa11.06□□□□□ -0.64
TRAPPC3-210ENST00000617904 FAT2Q9NYQ8 4349 aa11.05□□□□□ -0.64
TRAPPC3-210ENST00000617904 TRBV20-1A0A075B6N2 111 aa11.05□□□□□ -0.64
TRAPPC3-210ENST00000617904 C9orf116Q5BN46 136 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC3-210ENST00000617904 DNAH17Q9UFH2 4485 aa11.04□□□□□ -0.64
TRAPPC3-210ENST00000617904 UBE2V1Q13404 147 aa11.04□□□□□ -0.64
TRAPPC3-210ENST00000617904 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
TRAPPC3-210ENST00000617904 DNAH2Q9P225 4427 aa11.03□□□□□ -0.64
TRAPPC3-210ENST00000617904 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
TRAPPC3-210ENST00000617904 A0A1B0GVY2 172 aa11.02□□□□□ -0.65
TRAPPC3-210ENST00000617904 K7EP34 96 aa11.02□□□□□ -0.65
TRAPPC3-210ENST00000617904 LINC00336Q6ZUF6 198 aa11.02□□□□□ -0.65
TRAPPC3-210ENST00000617904 KRTAP1-5Q9BYS1 174 aa11.02□□□□□ -0.65
TRAPPC3-210ENST00000617904 TLX1NBP0CAT3 122 aa11.01□□□□□ -0.65
TRAPPC3-210ENST00000617904 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
TRAPPC3-210ENST00000617904 TMEM126AQ9H061 195 aa11.01□□□□□ -0.65
TRAPPC3-210ENST00000617904 PCLOQ9Y6V0 5065 aa11□□□□□ -0.65
TRAPPC3-210ENST00000617904 LOC107984640A0A0U1RRK4 108 aa11□□□□□ -0.65
TRAPPC3-210ENST00000617904 TRBV10-2A0A0K0K1G8 114 aa10.99□□□□□ -0.65
TRAPPC3-210ENST00000617904 LECT2O14960 151 aa10.99□□□□□ -0.65
TRAPPC3-210ENST00000617904 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-210ENST00000617904 M0R2N4 97 aa10.98□□□□□ -0.65
TRAPPC3-210ENST00000617904 SNCGO76070 127 aa10.98□□□□□ -0.65
TRAPPC3-210ENST00000617904 RPL18AQ02543 176 aaKnown RBP10.98□□□□□ -0.65
TRAPPC3-210ENST00000617904 RTL8CO15255 209 aa10.97□□□□□ -0.65
TRAPPC3-210ENST00000617904 CNBPP62633 177 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-210ENST00000617904 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
TRAPPC3-210ENST00000617904 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
TRAPPC3-210ENST00000617904 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
TRAPPC3-210ENST00000617904 PKHD1P08F94 4074 aa10.97□□□□□ -0.65
TRAPPC3-210ENST00000617904 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-210ENST00000617904 RPL28P46779 137 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-210ENST00000617904 C1orf134Q5TEV5 83 aa10.95□□□□□ -0.66
TRAPPC3-210ENST00000617904 XAGE1AQ9HD64 81 aa10.95□□□□□ -0.66
TRAPPC3-210ENST00000617904 DNAH11Q96DT5 4516 aa10.94□□□□□ -0.66
TRAPPC3-210ENST00000617904 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
TRAPPC3-210ENST00000617904 H0YGX0 51 aa10.94□□□□□ -0.66
TRAPPC3-210ENST00000617904 TRIAP1O43715 76 aa10.94□□□□□ -0.66
TRAPPC3-210ENST00000617904 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
TRAPPC3-210ENST00000617904 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
TRAPPC3-210ENST00000617904 Q6ZR54 194 aa10.93□□□□□ -0.66
TRAPPC3-210ENST00000617904 LINC00337Q8N6G1 96 aa10.93□□□□□ -0.66
TRAPPC3-210ENST00000617904 M0R378 163 aa10.92□□□□□ -0.66
TRAPPC3-210ENST00000617904 NCR3O14931 201 aa10.92□□□□□ -0.66
TRAPPC3-210ENST00000617904 Q6ZRP5 223 aa10.92□□□□□ -0.66
TRAPPC3-210ENST00000617904 PKD1P98161 4303 aa10.91□□□□□ -0.66
TRAPPC3-210ENST00000617904 PLA2G2DQ9UNK4 145 aa10.91□□□□□ -0.66
TRAPPC3-210ENST00000617904 F8W1H4 67 aa10.9□□□□□ -0.66
TRAPPC3-210ENST00000617904 GAGE2BQ13066 116 aa10.9□□□□□ -0.66
TRAPPC3-210ENST00000617904 Q6ZRN7 208 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC3-210ENST00000617904 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
TRAPPC3-210ENST00000617904 SMIM11BQ8TCY0 68 aa10.89□□□□□ -0.67
TRAPPC3-210ENST00000617904 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-210ENST00000617904 LRCOL1A6NCL2 159 aa10.88□□□□□ -0.67
TRAPPC3-210ENST00000617904 H3BMG7 143 aa10.88□□□□□ -0.67
TRAPPC3-210ENST00000617904 TCL1BO95988 128 aa10.87□□□□□ -0.67
TRAPPC3-210ENST00000617904 SLPIP03973 132 aa10.87□□□□□ -0.67
TRAPPC3-210ENST00000617904 VPREB1P12018 145 aa10.87□□□□□ -0.67
TRAPPC3-210ENST00000617904 Q8N814 137 aa10.87□□□□□ -0.67
TRAPPC3-210ENST00000617904 C16orf90A8MZG2 172 aa10.86□□□□□ -0.67
TRAPPC3-210ENST00000617904 RYR1P21817 5038 aa10.86□□□□□ -0.67
TRAPPC3-210ENST00000617904 A0A087WTM6 91 aa10.85□□□□□ -0.67
TRAPPC3-210ENST00000617904 DNAL4O96015 105 aa10.85□□□□□ -0.67
TRAPPC3-210ENST00000617904 PRR3P79522 188 aaKnown RBP10.85□□□□□ -0.67
TRAPPC3-210ENST00000617904 WFDC2Q14508 124 aa10.85□□□□□ -0.67
TRAPPC3-210ENST00000617904 C9orf163Q8N9P6 203 aa10.85□□□□□ -0.67
TRAPPC3-210ENST00000617904 IGLV6-57P01721 117 aa10.84□□□□□ -0.67
TRAPPC3-210ENST00000617904 IGLV5-37A0A075B6J1 123 aa10.84□□□□□ -0.67
TRAPPC3-210ENST00000617904 TRAV23DV6A0A075B6W5 121 aa10.84□□□□□ -0.67
TRAPPC3-210ENST00000617904 A0A1B0GX51 115 aa10.84□□□□□ -0.67
TRAPPC3-210ENST00000617904 LST1O00453 97 aa10.84□□□□□ -0.67
TRAPPC3-210ENST00000617904 TRACP01848 142 aa10.84□□□□□ -0.67
TRAPPC3-210ENST00000617904 C9orf129Q5T035 196 aaKnown RBP10.84□□□□□ -0.67
TRAPPC3-210ENST00000617904 LINC01620Q4KN68 170 aa10.83□□□□□ -0.68
TRAPPC3-210ENST00000617904 DIRC1Q969H9 104 aa10.83□□□□□ -0.68
TRAPPC3-210ENST00000617904 SLC25A20O43772 301 aa10.82□□□□□ -0.68
TRAPPC3-210ENST00000617904 GHRHP01286 108 aa10.82□□□□□ -0.68
TRAPPC3-210ENST00000617904 TRBV10-3A0A0K0K1G6 114 aa10.81□□□□□ -0.68
TRAPPC3-210ENST00000617904 C9JAW5 83 aa10.81□□□□□ -0.68
TRAPPC3-210ENST00000617904 CLEC2BQ92478 149 aa10.81□□□□□ -0.68
TRAPPC3-210ENST00000617904 KRTAP4-5Q9BYR2 181 aa10.81□□□□□ -0.68
TRAPPC3-210ENST00000617904 ABCA13Q86UQ4 5058 aa10.8□□□□□ -0.68
TRAPPC3-210ENST00000617904 TRBV7-6A0A0J9YX20 115 aa10.8□□□□□ -0.68
TRAPPC3-210ENST00000617904 C6orf99Q4VX62 202 aa10.8□□□□□ -0.68
TRAPPC3-210ENST00000617904 IGKV2-24A0A0C4DH68 120 aa10.78□□□□□ -0.68
TRAPPC3-210ENST00000617904 H3BT86 120 aa10.78□□□□□ -0.68
TRAPPC3-210ENST00000617904 M0QXV9 152 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms