RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 H3BNG1 76 aa12.77□□□□□ -0.37
AC008878.3-201ENST00000617428 PRR15LQ9BU68 103 aa12.77□□□□□ -0.37
AC008878.3-201ENST00000617428 Q8N3U1 123 aa12.77□□□□□ -0.37
AC008878.3-201ENST00000617428 C6orf48Q9UBA6 75 aa12.76□□□□□ -0.37
AC008878.3-201ENST00000617428 Q8NAQ8 132 aa12.76□□□□□ -0.37
AC008878.3-201ENST00000617428 LINC00167Q96N53 147 aa12.75□□□□□ -0.37
AC008878.3-201ENST00000617428 Q6Q795 121 aa12.73□□□□□ -0.37
AC008878.3-201ENST00000617428 FLNAP21333 2647 aaKnown RBP12.73□□□□□ -0.37
AC008878.3-201ENST00000617428 CCDC179H3BU77 68 aa12.73□□□□□ -0.37
AC008878.3-201ENST00000617428 ATP5EP56381 51 aaPredicted RBP12.73□□□□□ -0.37
AC008878.3-201ENST00000617428 COL27A1Q8IZC6 1860 aaPredicted RBP12.72□□□□□ -0.37
AC008878.3-201ENST00000617428 TRAV7A0A075B6U4 112 aa12.71□□□□□ -0.37
AC008878.3-201ENST00000617428 V9GYY9 64 aa12.7□□□□□ -0.38
AC008878.3-201ENST00000617428 NBDYA0A0U1RRE5 68 aa12.7□□□□□ -0.38
AC008878.3-201ENST00000617428 LINC00588Q9Y4M8 146 aa12.7□□□□□ -0.38
AC008878.3-201ENST00000617428 KIAA0087Q14695 138 aa12.69□□□□□ -0.38
AC008878.3-201ENST00000617428 ITPR3Q14573 2671 aa12.69□□□□□ -0.38
AC008878.3-201ENST00000617428 CFAP46Q8IYW2 2715 aa12.69□□□□□ -0.38
AC008878.3-201ENST00000617428 LINC01546A6NGU7 62 aa12.68□□□□□ -0.38
AC008878.3-201ENST00000617428 PCOTHQ58A44 107 aa12.68□□□□□ -0.38
AC008878.3-201ENST00000617428 LINC00846Q9NV44 126 aa12.68□□□□□ -0.38
AC008878.3-201ENST00000617428 A6NED7 52 aa12.68□□□□□ -0.38
AC008878.3-201ENST00000617428 LIMD2Q9BT23 127 aa12.67□□□□□ -0.38
AC008878.3-201ENST00000617428 IGLV5-45A0A087WSX0 123 aa12.66□□□□□ -0.38
AC008878.3-201ENST00000617428 PCSK5Q92824 1860 aa12.66□□□□□ -0.38
AC008878.3-201ENST00000617428 SPACA4Q8TDM5 124 aa12.64□□□□□ -0.39
AC008878.3-201ENST00000617428 TRBV7-6A0A0J9YX20 115 aa12.64□□□□□ -0.39
AC008878.3-201ENST00000617428 MOBPQ13875 183 aa12.64□□□□□ -0.39
AC008878.3-201ENST00000617428 PHF5AQ7RTV0 110 aaKnown RBP12.63□□□□□ -0.39
AC008878.3-201ENST00000617428 WWC2-AS2Q96NR7 200 aa12.63□□□□□ -0.39
AC008878.3-201ENST00000617428 KLK9Q2XQG4 91 aa12.63□□□□□ -0.39
AC008878.3-201ENST00000617428 RTL8CO15255 209 aa12.62□□□□□ -0.39
AC008878.3-201ENST00000617428 SPINK1P00995 79 aa12.62□□□□□ -0.39
AC008878.3-201ENST00000617428 SETXQ7Z333 2677 aaKnown RBP12.62□□□□□ -0.39
AC008878.3-201ENST00000617428 SOSTDC1Q6X4U4 206 aa12.62□□□□□ -0.39
AC008878.3-201ENST00000617428 A0A0U1RQV1 116 aa12.61□□□□□ -0.39
AC008878.3-201ENST00000617428 C16orf90A8MZG2 172 aa12.6□□□□□ -0.39
AC008878.3-201ENST00000617428 HCG22E2RYF7 251 aa12.6□□□□□ -0.39
AC008878.3-201ENST00000617428 H0Y9P7 68 aa12.59□□□□□ -0.39
AC008878.3-201ENST00000617428 A0A096LNT2 108 aa12.58□□□□□ -0.4
AC008878.3-201ENST00000617428 CHTF8P0CG12 524 aa12.57□□□□□ -0.4
AC008878.3-201ENST00000617428 SPATA3Q8NHX4 192 aa12.57□□□□□ -0.4
AC008878.3-201ENST00000617428 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
AC008878.3-201ENST00000617428 K7EIL1 84 aa12.55□□□□□ -0.4
AC008878.3-201ENST00000617428 IGKV2D-30A0A075B6S6 120 aa12.54□□□□□ -0.4
AC008878.3-201ENST00000617428 TRBV7-7A0A0K0K1E9 115 aa12.54□□□□□ -0.4
AC008878.3-201ENST00000617428 IGKV2-30P06310 120 aa12.54□□□□□ -0.4
AC008878.3-201ENST00000617428 CHD7Q9P2D1 2997 aa12.54□□□□□ -0.4
AC008878.3-201ENST00000617428 RANBP2P49792 3224 aaKnown RBP12.54□□□□□ -0.4
AC008878.3-201ENST00000617428 DNAH10OSP0CZ25 163 aa12.52□□□□□ -0.4
AC008878.3-201ENST00000617428 CRYGAP11844 174 aa12.52□□□□□ -0.4
AC008878.3-201ENST00000617428 Q6ZRP5 223 aa12.52□□□□□ -0.4
AC008878.3-201ENST00000617428 FAM218AQ96MZ4 157 aa12.52□□□□□ -0.4
AC008878.3-201ENST00000617428 TEP1Q99973 2627 aaKnown RBP12.52□□□□□ -0.41
AC008878.3-201ENST00000617428 STAB1Q9NY15 2570 aa12.52□□□□□ -0.41
AC008878.3-201ENST00000617428 KRTAP10-11P60412 298 aa12.52□□□□□ -0.41
AC008878.3-201ENST00000617428 CSNK1G2-AS1Q8NCQ2 148 aa12.52□□□□□ -0.41
AC008878.3-201ENST00000617428 ELOF1P60002 83 aaKnown RBP12.52□□□□□ -0.41
AC008878.3-201ENST00000617428 EPM2AB3EWF7 344 aa12.51□□□□□ -0.41
AC008878.3-201ENST00000617428 Q6ZRX8 168 aa12.51□□□□□ -0.41
AC008878.3-201ENST00000617428 GVQW2A0A096LPI5 108 aaPredicted RBP12.51□□□□□ -0.41
AC008878.3-201ENST00000617428 TMEM254Q8TBM7 123 aa12.51□□□□□ -0.41
AC008878.3-201ENST00000617428 SMIM26A0A096LP01 95 aa12.5□□□□□ -0.41
AC008878.3-201ENST00000617428 ST20-AS1Q8NBB2 130 aa12.48□□□□□ -0.41
AC008878.3-201ENST00000617428 HTTP42858 3142 aa12.47□□□□□ -0.41
AC008878.3-201ENST00000617428 CXCL6P80162 114 aa12.47□□□□□ -0.41
AC008878.3-201ENST00000617428 LINC00476Q8WZB0 136 aa12.46□□□□□ -0.41
AC008878.3-201ENST00000617428 KRTAP10-3P60369 221 aa12.46□□□□□ -0.42
AC008878.3-201ENST00000617428 C1orf64Q8NEQ6 169 aa12.46□□□□□ -0.42
AC008878.3-201ENST00000617428 TYMSOSQ8TAI1 123 aa12.46□□□□□ -0.42
AC008878.3-201ENST00000617428 AKAP13Q12802 2813 aa12.45□□□□□ -0.42
AC008878.3-201ENST00000617428 SMIM29Q86T20 159 aa12.44□□□□□ -0.42
AC008878.3-201ENST00000617428 C5orf42Q9H799 3197 aa12.43□□□□□ -0.42
AC008878.3-201ENST00000617428 Q8NBF4 154 aa12.42□□□□□ -0.42
AC008878.3-201ENST00000617428 C19orf73Q9NVV2 129 aa12.42□□□□□ -0.42
AC008878.3-201ENST00000617428 FAM168BA1KXE4 195 aa12.41□□□□□ -0.42
AC008878.3-201ENST00000617428 SMCPP49901 116 aaPredicted RBP12.41□□□□□ -0.42
AC008878.3-201ENST00000617428 hDV103S1A0JD37 113 aa12.41□□□□□ -0.42
AC008878.3-201ENST00000617428 BCE1O60756 84 aa12.4□□□□□ -0.42
AC008878.3-201ENST00000617428 GIG44P09565 113 aaPredicted RBP12.4□□□□□ -0.42
AC008878.3-201ENST00000617428 VPREB1P12018 145 aa12.39□□□□□ -0.43
AC008878.3-201ENST00000617428 CDIP1Q9H305 208 aa12.39□□□□□ -0.43
AC008878.3-201ENST00000617428 MKI67P46013 3256 aaKnown RBP12.39□□□□□ -0.43
AC008878.3-201ENST00000617428 KRTAP1-3Q8IUG1 177 aa12.36□□□□□ -0.43
AC008878.3-201ENST00000617428 PSPHP1O15172 72 aa12.35□□□□□ -0.43
AC008878.3-201ENST00000617428 SERTAD4-AS1Q5TG53 156 aa12.35□□□□□ -0.43
AC008878.3-201ENST00000617428 Q6ZQT0 140 aa12.34□□□□□ -0.43
AC008878.3-201ENST00000617428 A0A1B0GW54 56 aa12.33□□□□□ -0.43
AC008878.3-201ENST00000617428 PLA2G1BP04054 148 aaKnown RBP12.33□□□□□ -0.43
AC008878.3-201ENST00000617428 LITAFQ99732 161 aa12.33□□□□□ -0.43
AC008878.3-201ENST00000617428 TP53AIP1Q9HCN2 124 aa12.33□□□□□ -0.44
AC008878.3-201ENST00000617428 LAMA3Q16787 3333 aa12.32□□□□□ -0.44
AC008878.3-201ENST00000617428 C7orf65Q6ZTY9 151 aa12.31□□□□□ -0.44
AC008878.3-201ENST00000617428 IGLV6-57P01721 117 aa12.31□□□□□ -0.44
AC008878.3-201ENST00000617428 PRR34Q9NV39 138 aa12.31□□□□□ -0.44
AC008878.3-201ENST00000617428 PRO0461Q9UI25 63 aa12.31□□□□□ -0.44
AC008878.3-201ENST00000617428 LINC00313P59037 77 aa12.3□□□□□ -0.44
AC008878.3-201ENST00000617428 TEX15Q9BXT5 2789 aa12.3□□□□□ -0.44
AC008878.3-201ENST00000617428 RPL37AP61513 92 aaKnown RBP12.3□□□□□ -0.44
AC008878.3-201ENST00000617428 KRTAP1-1Q07627 177 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms