RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 SPAG11BQ08648 103 aa1.38□□□□□ -2.19
NEAT1-205ENST00000616315 GDF5OSQ5U4N7 250 aa1.38□□□□□ -2.19
NEAT1-205ENST00000616315 SPAG11AQ6PDA7 123 aa1.38□□□□□ -2.19
NEAT1-205ENST00000616315 PLAC8Q9NZF1 115 aa1.38□□□□□ -2.19
NEAT1-205ENST00000616315 CACNA1CQ13936 2221 aa1.38□□□□□ -2.19
NEAT1-205ENST00000616315 BPTFQ12830 3046 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 MUC6Q6W4X9 2439 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 TNRC6CQ9HCJ0 1690 aaKnown RBP1.37□□□□□ -2.19
NEAT1-205ENST00000616315 A0A087WTM6 91 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 TRBV6-4A0A1B0GX49 114 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 F8VRH5 84 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 INE1O15225 51 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 PRH1P02810 166 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 PDE6GP18545 87 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 COX7B2Q8TF08 81 aa1.37□□□□□ -2.19
NEAT1-205ENST00000616315 RP1L1Q8IWN7 2480 aaPredicted RBP1.37□□□□□ -2.19
NEAT1-205ENST00000616315 JMJD7-PLA2G4BH0Y9G9 81 aa1.36□□□□□ -2.19
NEAT1-205ENST00000616315 M0R3E3 92 aa1.36□□□□□ -2.19
NEAT1-205ENST00000616315 IFI6P09912 130 aa1.36□□□□□ -2.19
NEAT1-205ENST00000616315 RPL37AP61513 92 aaKnown RBP1.36□□□□□ -2.19
NEAT1-205ENST00000616315 NREPQ16612 68 aa1.36□□□□□ -2.19
NEAT1-205ENST00000616315 ALPK2Q86TB3 2170 aa1.36□□□□□ -2.19
NEAT1-205ENST00000616315 TRBV30A0A0K0K1B3 111 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 NBDYA0A0U1RRE5 68 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 LCE6AA0A183 80 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 A0A1B0GUT8 65 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 H0Y9P7 68 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 M0R135 149 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 UQCR11O14957 56 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 DEFB132Q7Z7B7 95 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 LINC01558Q9Y6Z2 57 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 MED13LQ71F56 2210 aa1.35□□□□□ -2.19
NEAT1-205ENST00000616315 MGPP08493 103 aa1.34□□□□□ -2.19
NEAT1-205ENST00000616315 LINC00322Q6ZN03 302 aaPredicted RBP1.34□□□□□ -2.19
NEAT1-205ENST00000616315 TMEM263Q8WUH6 116 aaKnown RBP1.34□□□□□ -2.19
NEAT1-205ENST00000616315 LINC00208Q96KT6 92 aa1.34□□□□□ -2.19
NEAT1-205ENST00000616315 OBSCN-AS1Q96MR7 158 aa1.34□□□□□ -2.19
NEAT1-205ENST00000616315 ABRACLQ9P1F3 81 aa1.34□□□□□ -2.19
NEAT1-205ENST00000616315 R4GMQ9 66 aa1.34□□□□□ -2.19
NEAT1-205ENST00000616315 K7EMI3 77 aa1.33□□□□□ -2.2
NEAT1-205ENST00000616315 ZNF137PP52743 207 aa1.33□□□□□ -2.2
NEAT1-205ENST00000616315 SPINK7P58062 85 aa1.33□□□□□ -2.2
NEAT1-205ENST00000616315 FXYD3Q14802 87 aa1.33□□□□□ -2.2
NEAT1-205ENST00000616315 SPRR4Q96PI1 79 aa1.33□□□□□ -2.2
NEAT1-205ENST00000616315 LINC00846Q9NV44 126 aa1.33□□□□□ -2.2
NEAT1-205ENST00000616315 F5P12259 2224 aa1.33□□□□□ -2.2
NEAT1-205ENST00000616315 TRAV21A0A0B4J279 112 aa1.32□□□□□ -2.2
NEAT1-205ENST00000616315 CTXND1A0A1B0GTU2 59 aa1.32□□□□□ -2.2
NEAT1-205ENST00000616315 NDUFB1O75438 58 aa1.32□□□□□ -2.2
NEAT1-205ENST00000616315 KRTAP10-4P60372 401 aaPredicted RBP1.32□□□□□ -2.2
NEAT1-205ENST00000616315 V9GYV3 84 aa1.32□□□□□ -2.2
NEAT1-205ENST00000616315 ABCA1O95477 2261 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.31□□□□□ -2.2
NEAT1-205ENST00000616315 TRAV1-2A0A0B4J238 106 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 PLNP26678 52 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 FCER1GP30273 86 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 COX17Q14061 63 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 ENHOQ6UWT2 76 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 C5orf56Q8N8D9 126 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 WFDC6Q9BQY6 131 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 WFDC10AQ9H1F0 79 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 TMEM14CQ9P0S9 112 aa1.31□□□□□ -2.2
NEAT1-205ENST00000616315 TRBV6-1A0A0K0K1D8 114 aa1.3□□□□□ -2.2
NEAT1-205ENST00000616315 SMIM27A0A1W2PRY6 76 aa1.3□□□□□ -2.2
NEAT1-205ENST00000616315 CAV3P56539 151 aa1.3□□□□□ -2.2
NEAT1-205ENST00000616315 C10orf113Q5VZT2 155 aa1.3□□□□□ -2.2
NEAT1-205ENST00000616315 WFDC9Q8NEX5 89 aa1.3□□□□□ -2.2
NEAT1-205ENST00000616315 Q96NJ1 140 aa1.3□□□□□ -2.2
NEAT1-205ENST00000616315 LINC00472Q9H8W2 130 aa1.3□□□□□ -2.2
NEAT1-205ENST00000616315 SPATA8Q6RVD6 105 aa1.29□□□□□ -2.2
NEAT1-205ENST00000616315 UBL5Q9BZL1 73 aa1.29□□□□□ -2.2
NEAT1-205ENST00000616315 PIEZO2Q9H5I5 2752 aa1.29□□□□□ -2.2
NEAT1-205ENST00000616315 CADP27708 2225 aa1.28□□□□□ -2.2
NEAT1-205ENST00000616315 TRGV1A0A0A0MS02 117 aa1.28□□□□□ -2.2
NEAT1-205ENST00000616315 COX6B1P14854 86 aa1.28□□□□□ -2.2
NEAT1-205ENST00000616315 SNRPGP62308 76 aaKnown RBP1.28□□□□□ -2.2
NEAT1-205ENST00000616315 TNCP24821 2201 aa1.28□□□□□ -2.2
NEAT1-205ENST00000616315 SSC5DA1L4H1 1573 aa1.27□□□□□ -2.21
NEAT1-205ENST00000616315 LINC00959A0A1B0GUT2 108 aa1.27□□□□□ -2.21
NEAT1-205ENST00000616315 IGIPA6NJ69 53 aa1.27□□□□□ -2.21
NEAT1-205ENST00000616315 M0R1W7 72 aa1.27□□□□□ -2.21
NEAT1-205ENST00000616315 NDUFA4O00483 81 aa1.27□□□□□ -2.21
NEAT1-205ENST00000616315 ACYP2P14621 99 aa1.27□□□□□ -2.21
NEAT1-205ENST00000616315 DEFB112Q30KQ8 113 aa1.27□□□□□ -2.21
NEAT1-205ENST00000616315 GAFA1Q96PS6 74 aa1.27□□□□□ -2.21
NEAT1-205ENST00000616315 GOLGA4Q13439 2230 aaKnown RBP1.27□□□□□ -2.21
NEAT1-205ENST00000616315 CNOT1A5YKK6 2376 aaKnown RBP1.26□□□□□ -2.21
NEAT1-205ENST00000616315 LINC01546A6NGU7 62 aa1.26□□□□□ -2.21
NEAT1-205ENST00000616315 SERF2P84101 59 aa1.26□□□□□ -2.21
NEAT1-205ENST00000616315 DEFB114Q30KQ6 69 aa1.26□□□□□ -2.21
NEAT1-205ENST00000616315 A0A1B0GU69 56 aa1.25□□□□□ -2.21
NEAT1-205ENST00000616315 I3L3M4 83 aa1.25□□□□□ -2.21
NEAT1-205ENST00000616315 COX7BP24311 80 aa1.24□□□□□ -2.21
NEAT1-205ENST00000616315 KCNQ1DNQ9H478 68 aa1.24□□□□□ -2.21
NEAT1-205ENST00000616315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.24□□□□□ -2.21
NEAT1-205ENST00000616315 CACNA1BQ00975 2339 aa1.23□□□□□ -2.21
NEAT1-205ENST00000616315 G3V318 75 aa1.23□□□□□ -2.21
NEAT1-205ENST00000616315 FXYD4P59646 89 aa1.23□□□□□ -2.21
NEAT1-205ENST00000616315 ZDBF2Q9HCK1 2354 aa1.23□□□□□ -2.21
NEAT1-205ENST00000616315 URB1O60287 2271 aaKnown RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms