RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 C1orf43Q9BWL3 253 aa7.16□□□□□ -1.26
COL4A1-205ENST00000615732 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
COL4A1-205ENST00000615732 SPCS1Q9Y6A9 102 aa7.16□□□□□ -1.26
COL4A1-205ENST00000615732 K7EP34 96 aa7.15□□□□□ -1.26
COL4A1-205ENST00000615732 Q1RN00 199 aa7.15□□□□□ -1.26
COL4A1-205ENST00000615732 ERG28Q9UKR5 140 aa7.15□□□□□ -1.26
COL4A1-205ENST00000615732 IGKV2D-24A0A075B6R9 120 aa7.14□□□□□ -1.27
COL4A1-205ENST00000615732 EPM2AB3EWF7 344 aa7.14□□□□□ -1.27
COL4A1-205ENST00000615732 TSPAN13O95857 204 aa7.14□□□□□ -1.27
COL4A1-205ENST00000615732 PFN2P35080 140 aa7.14□□□□□ -1.27
COL4A1-205ENST00000615732 MIR7-3HGQ8N6C7 128 aa7.14□□□□□ -1.27
COL4A1-205ENST00000615732 H7C2G1 150 aa7.13□□□□□ -1.27
COL4A1-205ENST00000615732 C2orf82Q6UX34 121 aa7.13□□□□□ -1.27
COL4A1-205ENST00000615732 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
COL4A1-205ENST00000615732 INAFM2P0DMQ5 153 aa7.12□□□□□ -1.27
COL4A1-205ENST00000615732 PSMB2P49721 201 aa7.12□□□□□ -1.27
COL4A1-205ENST00000615732 KIAA0087Q14695 138 aa7.12□□□□□ -1.27
COL4A1-205ENST00000615732 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
COL4A1-205ENST00000615732 RMI2Q96E14 147 aa7.12□□□□□ -1.27
COL4A1-205ENST00000615732 PPDPFQ9H3Y8 114 aa7.12□□□□□ -1.27
COL4A1-205ENST00000615732 Q9HAA7 133 aa7.12□□□□□ -1.27
COL4A1-205ENST00000615732 SCGB1C2P0DMR2 95 aa7.11□□□□□ -1.27
COL4A1-205ENST00000615732 RPL13AP40429 203 aaKnown RBP7.11□□□□□ -1.27
COL4A1-205ENST00000615732 SOSTDC1Q6X4U4 206 aa7.11□□□□□ -1.27
COL4A1-205ENST00000615732 ZNF561-AS1K7EIQ3 104 aa7.1□□□□□ -1.27
COL4A1-205ENST00000615732 XGP55808 180 aa7.1□□□□□ -1.27
COL4A1-205ENST00000615732 HAMPP81172 84 aa7.1□□□□□ -1.27
COL4A1-205ENST00000615732 COX17Q14061 63 aa7.1□□□□□ -1.27
COL4A1-205ENST00000615732 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
COL4A1-205ENST00000615732 KRTAP10-1P60331 282 aa7.09□□□□□ -1.27
COL4A1-205ENST00000615732 HIGD2BQ4VC39 106 aa7.09□□□□□ -1.27
COL4A1-205ENST00000615732 Q5VSD8 79 aa7.09□□□□□ -1.27
COL4A1-205ENST00000615732 SND1-IT1Q9HBX3 110 aa7.09□□□□□ -1.27
COL4A1-205ENST00000615732 TRAV13-2A0A0B4J235 113 aa7.08□□□□□ -1.28
COL4A1-205ENST00000615732 KRTAP26-1Q6PEX3 210 aa7.08□□□□□ -1.28
COL4A1-205ENST00000615732 LINC00526Q96FQ7 95 aa7.08□□□□□ -1.28
COL4A1-205ENST00000615732 CAMK2N2Q96S95 79 aa7.08□□□□□ -1.28
COL4A1-205ENST00000615732 A0A087WTM6 91 aa7.07□□□□□ -1.28
COL4A1-205ENST00000615732 COX6CP09669 75 aa7.07□□□□□ -1.28
COL4A1-205ENST00000615732 UNQ6190/PRO20217Q6UXQ8 127 aa7.07□□□□□ -1.28
COL4A1-205ENST00000615732 NTN5Q8WTR8 489 aaPredicted RBP7.07□□□□□ -1.28
COL4A1-205ENST00000615732 HMCN2Q8NDA2 5059 aa7.07□□□□□ -1.28
COL4A1-205ENST00000615732 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
COL4A1-205ENST00000615732 GVQW2A0A096LPI5 108 aaPredicted RBP7.06□□□□□ -1.28
COL4A1-205ENST00000615732 F8WDY8 70 aa7.06□□□□□ -1.28
COL4A1-205ENST00000615732 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
COL4A1-205ENST00000615732 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
COL4A1-205ENST00000615732 SRRM2Q9UQ35 2752 aaKnown RBP7.06□□□□□ -1.28
COL4A1-205ENST00000615732 TRBV20-1A0A075B6N2 111 aa7.05□□□□□ -1.28
COL4A1-205ENST00000615732 TRBV30A0A0K0K1B3 111 aa7.05□□□□□ -1.28
COL4A1-205ENST00000615732 SMR3BP02814 79 aaPredicted RBP7.05□□□□□ -1.28
COL4A1-205ENST00000615732 C9orf116Q5BN46 136 aaPredicted RBP7.05□□□□□ -1.28
COL4A1-205ENST00000615732 C10orf25Q5T742 122 aa7.05□□□□□ -1.28
COL4A1-205ENST00000615732 FLG2Q5D862 2391 aaPredicted RBP7.04□□□□□ -1.28
COL4A1-205ENST00000615732 TRIAP1O43715 76 aa7.04□□□□□ -1.28
COL4A1-205ENST00000615732 C6orf48Q9UBA6 75 aa7.04□□□□□ -1.28
COL4A1-205ENST00000615732 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
COL4A1-205ENST00000615732 H3BMG7 143 aa7.03□□□□□ -1.28
COL4A1-205ENST00000615732 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
COL4A1-205ENST00000615732 OR13C6PQ8NH95 151 aa7.03□□□□□ -1.28
COL4A1-205ENST00000615732 USP17L23D6RBM5 183 aa7.02□□□□□ -1.29
COL4A1-205ENST00000615732 TCL1BO95988 128 aa7.02□□□□□ -1.29
COL4A1-205ENST00000615732 SYCNQ0VAF6 134 aa7.02□□□□□ -1.29
COL4A1-205ENST00000615732 Q6ZRU5 148 aa7.02□□□□□ -1.29
COL4A1-205ENST00000615732 IGKV2-28A0A075B6P5 120 aa7.01□□□□□ -1.29
COL4A1-205ENST00000615732 PSCAO43653 123 aa7.01□□□□□ -1.29
COL4A1-205ENST00000615732 NDUFC2O95298 119 aa7.01□□□□□ -1.29
COL4A1-205ENST00000615732 IGKV2D-28P01615 120 aa7.01□□□□□ -1.29
COL4A1-205ENST00000615732 IGLV5-52A0A0A0MRZ9 124 aa7□□□□□ -1.29
COL4A1-205ENST00000615732 F8W1H4 67 aa7□□□□□ -1.29
COL4A1-205ENST00000615732 LINC00337Q8N6G1 96 aa7□□□□□ -1.29
COL4A1-205ENST00000615732 CARD19Q96LW7 228 aa7□□□□□ -1.29
COL4A1-205ENST00000615732 LRCOL1A6NCL2 159 aa6.99□□□□□ -1.29
COL4A1-205ENST00000615732 NCR3O14931 201 aa6.99□□□□□ -1.29
COL4A1-205ENST00000615732 MTURNQ8N3F0 131 aa6.98□□□□□ -1.29
COL4A1-205ENST00000615732 C9JAW5 83 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 NDUFC2-KCTD14E9PQ53 114 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 RPL28P46779 137 aaKnown RBP6.97□□□□□ -1.29
COL4A1-205ENST00000615732 WFDC2Q14508 124 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 RNF151Q2KHN1 245 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 S100A7L2Q5SY68 101 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 SMIM11BQ8TCY0 68 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 CLEC2BQ92478 149 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 FAM30AQ9NZY2 134 aa6.97□□□□□ -1.29
COL4A1-205ENST00000615732 J3QL48 77 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 LST1O00453 97 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 LECT2O14960 151 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 RPL18AQ02543 176 aaKnown RBP6.96□□□□□ -1.3
COL4A1-205ENST00000615732 LINC01620Q4KN68 170 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 GAGE2EQ4V326 116 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 C14orf177Q52M58 125 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 Q8N814 137 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 GAGE2DQ9UEU5 116 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 PRO0461Q9UI25 63 aa6.96□□□□□ -1.3
COL4A1-205ENST00000615732 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
COL4A1-205ENST00000615732 TRBV10-2A0A0K0K1G8 114 aa6.95□□□□□ -1.3
COL4A1-205ENST00000615732 PRR3P79522 188 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms