RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 KRTAP1-5Q9BYS1 174 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 TRBV20-1A0A075B6N2 111 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 DNAH10OSP0CZ25 163 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 ATXN8Q156A1 80 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 NTN5Q8WTR8 489 aaPredicted RBP2.28□□□□□ -2.04
LIG4-205ENST00000614526 COPS9Q8WXC6 57 aa2.28□□□□□ -2.04
LIG4-205ENST00000614526 PLECQ15149 4684 aaKnown RBP2.27□□□□□ -2.05
LIG4-205ENST00000614526 DNAH7Q8WXX0 4024 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 TRAV13-2A0A0B4J235 113 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 SLPIP03973 132 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 CXCL5P42830 114 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.27□□□□□ -2.05
LIG4-205ENST00000614526 USP17L23D6RBM5 183 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 K7ERU9 68 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 S100A7L2Q5SY68 101 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 ANKRD29Q8N6D5 301 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 FBN3Q75N90 2809 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 A0A087WYN8 130 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 PSCAO43653 123 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 LINC01561Q8N1V8 128 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 CARD19Q96LW7 228 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 APLNQ9ULZ1 77 aa2.27□□□□□ -2.05
LIG4-205ENST00000614526 TEX49A0A1B0GTD5 131 aa2.26□□□□□ -2.05
LIG4-205ENST00000614526 FUSP35637 526 aaKnown RBP eCLIP2.26□□□□□ -2.05
LIG4-205ENST00000614526 SYCNQ0VAF6 134 aa2.26□□□□□ -2.05
LIG4-205ENST00000614526 LST1O00453 97 aa2.26□□□□□ -2.05
LIG4-205ENST00000614526 GAGE2BQ13066 116 aa2.26□□□□□ -2.05
LIG4-205ENST00000614526 COX17Q14061 63 aa2.26□□□□□ -2.05
LIG4-205ENST00000614526 C4orf48Q5BLP8 95 aa2.26□□□□□ -2.05
LIG4-205ENST00000614526 Q6ZRP5 223 aa2.26□□□□□ -2.05
LIG4-205ENST00000614526 C6orf99Q4VX62 202 aa2.26□□□□□ -2.05
LIG4-205ENST00000614526 TRBV10-2A0A0K0K1G8 114 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 FAM168BA1KXE4 195 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 STARD9Q9P2P6 4700 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 IGKV2-24A0A0C4DH68 120 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 TRBV10-3A0A0K0K1G6 114 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 BAALC-AS2P0C853 105 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 RPL28P46779 137 aaKnown RBP2.25□□□□□ -2.05
LIG4-205ENST00000614526 TEN1Q86WV5 123 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 NDUFC2-KCTD14E9PQ53 114 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 DNAL4O96015 105 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 TMEM126AQ9H061 195 aa2.25□□□□□ -2.05
LIG4-205ENST00000614526 DNAH1Q9P2D7 4330 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 GVQW2A0A096LPI5 108 aaPredicted RBP2.24□□□□□ -2.05
LIG4-205ENST00000614526 RPL37AP8A6NKH3 93 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 C9orf129Q5T035 196 aaKnown RBP2.24□□□□□ -2.05
LIG4-205ENST00000614526 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 NHLRC4P0CG21 123 aaPredicted RBP2.24□□□□□ -2.05
LIG4-205ENST00000614526 SERTAD4-AS1Q5TG53 156 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 NDUFC2O95298 119 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 FAM19A5Q7Z5A7 132 aaPredicted RBP2.24□□□□□ -2.05
LIG4-205ENST00000614526 PPDPFLQ8WWR9 84 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 RMI2Q96E14 147 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 C2orf48Q96LS8 159 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 UPK3BQ9BT76 320 aa2.24□□□□□ -2.05
LIG4-205ENST00000614526 NUPR2A6NF83 97 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 J3QR89 54 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 CHTF8P0CG12 524 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 VPREB1P12018 145 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 C21orf62-AS1Q17RA5 79 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 KMT2AQ03164 3969 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 NBDYA0A0U1RRE5 68 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 H0YGX0 51 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 LY6G6CO95867 125 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 NKAPP1Q8N9T2 125 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 DPH3Q96FX2 82 aa2.23□□□□□ -2.05
LIG4-205ENST00000614526 TRAV23DV6A0A075B6W5 121 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 TRACP01848 142 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 H3BT86 120 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 ZNF73O43830 326 aaPredicted RBP2.22□□□□□ -2.05
LIG4-205ENST00000614526 IGLV6-57P01721 117 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 Q8N814 137 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 C7orf33Q8WU49 177 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 C14orf132Q9NPU4 83 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 C22orf24Q9Y442 160 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 M0R378 163 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 DEFB105AQ8NG35 78 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 PPDPFQ9H3Y8 114 aa2.22□□□□□ -2.05
LIG4-205ENST00000614526 A0A096LNI7 61 aa2.21□□□□□ -2.05
LIG4-205ENST00000614526 Q6ZQY7 126 aa2.21□□□□□ -2.05
LIG4-205ENST00000614526 DIRC1Q969H9 104 aa2.21□□□□□ -2.05
LIG4-205ENST00000614526 SRRM2Q9UQ35 2752 aaKnown RBP2.21□□□□□ -2.06
LIG4-205ENST00000614526 hADV29S1A0JD25 119 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 GAGE2AQ6NT46 116 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 LINC00575Q6W349 94 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 KRTAP7-1Q8IUC3 87 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 CDIP1Q9H305 208 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 ORMDL1Q9P0S3 153 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 CBY1Q9Y3M2 126 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 A0A1W2PNN7 141 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 MT-ATP8P03928 68 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 MUC7Q8TAX7 377 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 LINC00167Q96N53 147 aa2.21□□□□□ -2.06
LIG4-205ENST00000614526 DYNC2H1Q8NCM8 4307 aaKnown RBP2.2□□□□□ -2.06
LIG4-205ENST00000614526 LOC107984640A0A0U1RRK4 108 aa2.2□□□□□ -2.06
LIG4-205ENST00000614526 COX7BP24311 80 aa2.2□□□□□ -2.06
LIG4-205ENST00000614526 XGP55808 180 aa2.2□□□□□ -2.06
LIG4-205ENST00000614526 TTC32Q5I0X7 151 aa2.2□□□□□ -2.06
LIG4-205ENST00000614526 LAMTOR3Q9UHA4 124 aa2.2□□□□□ -2.06
LIG4-205ENST00000614526 VPS13DQ5THJ4 4388 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms