RNA–Protein interactions for RNA: ENST00000613246.4

PTPRJ-207, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRJ, Length 7,851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-207ENST00000613246 LINC01561Q8N1V8 128 aa13.07□□□□□ -0.32
PTPRJ-207ENST00000613246 Q96NJ1 140 aa13.07□□□□□ -0.32
PTPRJ-207ENST00000613246 BPTFQ12830 3046 aa13.06□□□□□ -0.32
PTPRJ-207ENST00000613246 IGLV1-51P01701 117 aa13.06□□□□□ -0.32
PTPRJ-207ENST00000613246 CRIP3Q6Q6R5 217 aa13.05□□□□□ -0.32
PTPRJ-207ENST00000613246 CDIP1Q9H305 208 aa13.04□□□□□ -0.32
PTPRJ-207ENST00000613246 LINC01600Q96MT4 127 aa13.04□□□□□ -0.32
PTPRJ-207ENST00000613246 URB1-AS1Q96HZ7 61 aa13.03□□□□□ -0.32
PTPRJ-207ENST00000613246 PIEZO1Q92508 2521 aa13.03□□□□□ -0.32
PTPRJ-207ENST00000613246 ZNF462Q96JM2 2506 aa13.03□□□□□ -0.32
PTPRJ-207ENST00000613246 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.32
PTPRJ-207ENST00000613246 FAM229AH3BQW9 127 aa13.02□□□□□ -0.33
PTPRJ-207ENST00000613246 RPS28P62857 69 aaKnown RBP13.01□□□□□ -0.33
PTPRJ-207ENST00000613246 SETD2Q9BYW2 2564 aaPredicted RBP13□□□□□ -0.33
PTPRJ-207ENST00000613246 H3BPC8 53 aa13□□□□□ -0.33
PTPRJ-207ENST00000613246 LINC00310P59036 64 aa12.98□□□□□ -0.33
PTPRJ-207ENST00000613246 LINC00167Q96N53 147 aa12.98□□□□□ -0.33
PTPRJ-207ENST00000613246 LINC00476Q8WZB0 136 aa12.98□□□□□ -0.33
PTPRJ-207ENST00000613246 TM2D3Q9BRN9 247 aa12.98□□□□□ -0.33
PTPRJ-207ENST00000613246 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
PTPRJ-207ENST00000613246 NAV2Q8IVL1 2488 aa12.95□□□□□ -0.34
PTPRJ-207ENST00000613246 UQCR11O14957 56 aa12.95□□□□□ -0.34
PTPRJ-207ENST00000613246 NHLRC4P0CG21 123 aaPredicted RBP12.94□□□□□ -0.34
PTPRJ-207ENST00000613246 PHF5AQ7RTV0 110 aaKnown RBP12.94□□□□□ -0.34
PTPRJ-207ENST00000613246 C11orf72Q8NBR9 251 aa12.94□□□□□ -0.34
PTPRJ-207ENST00000613246 MUC22E2RYF6 1773 aaPredicted RBP12.93□□□□□ -0.34
PTPRJ-207ENST00000613246 AVPP01185 164 aa12.93□□□□□ -0.34
PTPRJ-207ENST00000613246 FHL3Q13643 280 aa12.92□□□□□ -0.34
PTPRJ-207ENST00000613246 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
PTPRJ-207ENST00000613246 EPM2AB3EWF7 344 aa12.92□□□□□ -0.34
PTPRJ-207ENST00000613246 COX6B2Q6YFQ2 88 aa12.92□□□□□ -0.34
PTPRJ-207ENST00000613246 BCE1O60756 84 aa12.91□□□□□ -0.34
PTPRJ-207ENST00000613246 Q6ZQT0 140 aa12.91□□□□□ -0.34
PTPRJ-207ENST00000613246 C9orf129Q5T035 196 aaKnown RBP12.91□□□□□ -0.34
PTPRJ-207ENST00000613246 COA5Q86WW8 74 aa12.9□□□□□ -0.34
PTPRJ-207ENST00000613246 MIR22HGQ0VDD5 57 aa12.9□□□□□ -0.35
PTPRJ-207ENST00000613246 Q8NBF4 154 aa12.89□□□□□ -0.35
PTPRJ-207ENST00000613246 A0A1B0GW54 56 aa12.88□□□□□ -0.35
PTPRJ-207ENST00000613246 LUZP6Q538Z0 58 aa12.88□□□□□ -0.35
PTPRJ-207ENST00000613246 ELOF1P60002 83 aaKnown RBP12.87□□□□□ -0.35
PTPRJ-207ENST00000613246 KIF25-AS1Q9Y6Z4 181 aa12.87□□□□□ -0.35
PTPRJ-207ENST00000613246 FAM19A4Q96LR4 140 aa12.85□□□□□ -0.35
PTPRJ-207ENST00000613246 C16orf90A8MZG2 172 aa12.85□□□□□ -0.35
PTPRJ-207ENST00000613246 C16orf95Q9H693 158 aa12.85□□□□□ -0.35
PTPRJ-207ENST00000613246 A0A096LNJ9 63 aa12.84□□□□□ -0.35
PTPRJ-207ENST00000613246 SPTBN4Q9H254 2564 aa12.84□□□□□ -0.35
PTPRJ-207ENST00000613246 LINC01554Q52M75 96 aa12.84□□□□□ -0.35
PTPRJ-207ENST00000613246 CYP4F30PQ9H0H9 118 aa12.84□□□□□ -0.35
PTPRJ-207ENST00000613246 LOC101927531A0A1B0GV80 90 aa12.84□□□□□ -0.35
PTPRJ-207ENST00000613246 FAM218AQ96MZ4 157 aa12.84□□□□□ -0.35
PTPRJ-207ENST00000613246 Q6ZRP5 223 aa12.83□□□□□ -0.35
PTPRJ-207ENST00000613246 TRBV7-4A0A0J9YYF1 115 aa12.83□□□□□ -0.36
PTPRJ-207ENST00000613246 A8MUN3 132 aa12.83□□□□□ -0.36
PTPRJ-207ENST00000613246 CENPFP49454 3210 aa12.82□□□□□ -0.36
PTPRJ-207ENST00000613246 LOC110117498A0A087WWA1 95 aa12.82□□□□□ -0.36
PTPRJ-207ENST00000613246 Q6ZRX8 168 aa12.82□□□□□ -0.36
PTPRJ-207ENST00000613246 CDSNQ15517 529 aa12.82□□□□□ -0.36
PTPRJ-207ENST00000613246 RTL8CO15255 209 aa12.81□□□□□ -0.36
PTPRJ-207ENST00000613246 IGLV6-57P01721 117 aa12.81□□□□□ -0.36
PTPRJ-207ENST00000613246 J3QL48 77 aa12.8□□□□□ -0.36
PTPRJ-207ENST00000613246 A8MWP4 228 aa12.79□□□□□ -0.36
PTPRJ-207ENST00000613246 ST20-AS1Q8NBB2 130 aa12.79□□□□□ -0.36
PTPRJ-207ENST00000613246 USP9XQ93008 2570 aaPredicted RBP12.78□□□□□ -0.36
PTPRJ-207ENST00000613246 COX8CQ7Z4L0 72 aa12.77□□□□□ -0.36
PTPRJ-207ENST00000613246 IGLV5-39A0A0G2JS06 123 aa12.77□□□□□ -0.37
PTPRJ-207ENST00000613246 IGHV3OR16-9A0A0B4J2B5 98 aa12.77□□□□□ -0.37
PTPRJ-207ENST00000613246 K7EQZ3 153 aa12.75□□□□□ -0.37
PTPRJ-207ENST00000613246 MRPL34Q9BQ48 92 aaKnown RBP12.75□□□□□ -0.37
PTPRJ-207ENST00000613246 KRTAP10-9P60411 292 aa12.73□□□□□ -0.37
PTPRJ-207ENST00000613246 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
PTPRJ-207ENST00000613246 A0A0D9SG42 100 aa12.72□□□□□ -0.37
PTPRJ-207ENST00000613246 IGF2RP11717 2491 aa12.72□□□□□ -0.37
PTPRJ-207ENST00000613246 CD164Q04900 197 aa12.7□□□□□ -0.38
PTPRJ-207ENST00000613246 LINC00315P59091 139 aa12.7□□□□□ -0.38
PTPRJ-207ENST00000613246 C9orf92A6NGG3 77 aa12.7□□□□□ -0.38
PTPRJ-207ENST00000613246 CDC42SE1Q9NRR8 79 aa12.69□□□□□ -0.38
PTPRJ-207ENST00000613246 ERC2-IT1O76042 136 aa12.69□□□□□ -0.38
PTPRJ-207ENST00000613246 KTN1-AS1Q86SY8 53 aa12.69□□□□□ -0.38
PTPRJ-207ENST00000613246 MTORP42345 2549 aa12.69□□□□□ -0.38
PTPRJ-207ENST00000613246 LINC01546A6NGU7 62 aa12.68□□□□□ -0.38
PTPRJ-207ENST00000613246 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
PTPRJ-207ENST00000613246 DSCR10P59022 87 aa12.66□□□□□ -0.38
PTPRJ-207ENST00000613246 FAM168BA1KXE4 195 aa12.66□□□□□ -0.38
PTPRJ-207ENST00000613246 OBSCN-AS1Q96MR7 158 aa12.66□□□□□ -0.38
PTPRJ-207ENST00000613246 USP24Q9UPU5 2620 aa12.64□□□□□ -0.39
PTPRJ-207ENST00000613246 PRO3102Q9H379 93 aa12.63□□□□□ -0.39
PTPRJ-207ENST00000613246 LCA10Q71F78 164 aa12.62□□□□□ -0.39
PTPRJ-207ENST00000613246 RBM12B-AS1Q9P1G2 102 aa12.59□□□□□ -0.39
PTPRJ-207ENST00000613246 POLQO75417 2590 aa12.59□□□□□ -0.39
PTPRJ-207ENST00000613246 IGLV5-37A0A075B6J1 123 aa12.58□□□□□ -0.4
PTPRJ-207ENST00000613246 NBDYA0A0U1RRE5 68 aa12.58□□□□□ -0.4
PTPRJ-207ENST00000613246 NCOR2Q9Y618 2525 aa12.57□□□□□ -0.4
PTPRJ-207ENST00000613246 PRO0461Q9UI25 63 aa12.57□□□□□ -0.4
PTPRJ-207ENST00000613246 IGLV5-45A0A087WSX0 123 aa12.56□□□□□ -0.4
PTPRJ-207ENST00000613246 H3BNG1 76 aa12.55□□□□□ -0.4
PTPRJ-207ENST00000613246 CSNK1G2-AS1Q8NCQ2 148 aa12.55□□□□□ -0.4
PTPRJ-207ENST00000613246 GVQW2A0A096LPI5 108 aaPredicted RBP12.53□□□□□ -0.4
PTPRJ-207ENST00000613246 CHD8Q9HCK8 2581 aa12.53□□□□□ -0.4
PTPRJ-207ENST00000613246 LINC00304Q8N9R0 145 aa12.53□□□□□ -0.4
PTPRJ-207ENST00000613246 LINC00588Q9Y4M8 146 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms