RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 PHF5AQ7RTV0 110 aaKnown RBP13.85□□□□□ -0.19
CTDP1-208ENST00000613122 PTPRBP23467 1997 aa13.84□□□□□ -0.19
CTDP1-208ENST00000613122 IGKV2D-30A0A075B6S6 120 aa13.84□□□□□ -0.19
CTDP1-208ENST00000613122 IGKV2-30P06310 120 aa13.84□□□□□ -0.19
CTDP1-208ENST00000613122 SPTBN4Q9H254 2564 aa13.84□□□□□ -0.19
CTDP1-208ENST00000613122 Q6ZRP5 223 aa13.83□□□□□ -0.2
CTDP1-208ENST00000613122 SMIM26A0A096LP01 95 aa13.81□□□□□ -0.2
CTDP1-208ENST00000613122 CRYGAP11844 174 aa13.81□□□□□ -0.2
CTDP1-208ENST00000613122 LINC00846Q9NV44 126 aa13.81□□□□□ -0.2
CTDP1-208ENST00000613122 COL27A1Q8IZC6 1860 aaPredicted RBP13.8□□□□□ -0.2
CTDP1-208ENST00000613122 SRCAPQ6ZRS2 3230 aa13.79□□□□□ -0.2
CTDP1-208ENST00000613122 USP9YO00507 2555 aaPredicted RBP13.79□□□□□ -0.2
CTDP1-208ENST00000613122 IGLV5-45A0A087WSX0 123 aa13.79□□□□□ -0.2
CTDP1-208ENST00000613122 TYMSOSQ8TAI1 123 aa13.77□□□□□ -0.2
CTDP1-208ENST00000613122 CXCL6P80162 114 aa13.77□□□□□ -0.21
CTDP1-208ENST00000613122 SETD2Q9BYW2 2564 aaPredicted RBP13.77□□□□□ -0.21
CTDP1-208ENST00000613122 SPATA3Q8NHX4 192 aa13.76□□□□□ -0.21
CTDP1-208ENST00000613122 Q9UF83 564 aa13.76□□□□□ -0.21
CTDP1-208ENST00000613122 CHTF8P0CG12 524 aa13.76□□□□□ -0.21
CTDP1-208ENST00000613122 ELOF1P60002 83 aaKnown RBP13.75□□□□□ -0.21
CTDP1-208ENST00000613122 C1orf64Q8NEQ6 169 aa13.75□□□□□ -0.21
CTDP1-208ENST00000613122 SOSTDC1Q6X4U4 206 aa13.75□□□□□ -0.21
CTDP1-208ENST00000613122 Q8NBF4 154 aa13.75□□□□□ -0.21
CTDP1-208ENST00000613122 hDV103S1A0JD37 113 aa13.74□□□□□ -0.21
CTDP1-208ENST00000613122 EPM2AB3EWF7 344 aa13.74□□□□□ -0.21
CTDP1-208ENST00000613122 TMEM254Q8TBM7 123 aa13.73□□□□□ -0.21
CTDP1-208ENST00000613122 GVQW2A0A096LPI5 108 aaPredicted RBP13.73□□□□□ -0.21
CTDP1-208ENST00000613122 PLA2G1BP04054 148 aaKnown RBP13.73□□□□□ -0.21
CTDP1-208ENST00000613122 C7orf65Q6ZTY9 151 aa13.73□□□□□ -0.21
CTDP1-208ENST00000613122 Q6ZRX8 168 aa13.72□□□□□ -0.21
CTDP1-208ENST00000613122 DNAH10OSP0CZ25 163 aa13.7□□□□□ -0.22
CTDP1-208ENST00000613122 SMIM29Q86T20 159 aa13.69□□□□□ -0.22
CTDP1-208ENST00000613122 TP53AIP1Q9HCN2 124 aa13.69□□□□□ -0.22
CTDP1-208ENST00000613122 J3QL48 77 aa13.68□□□□□ -0.22
CTDP1-208ENST00000613122 KLK9Q2XQG4 91 aa13.68□□□□□ -0.22
CTDP1-208ENST00000613122 LINC00476Q8WZB0 136 aa13.67□□□□□ -0.22
CTDP1-208ENST00000613122 BCE1O60756 84 aa13.67□□□□□ -0.22
CTDP1-208ENST00000613122 K7EIL1 84 aa13.65□□□□□ -0.22
CTDP1-208ENST00000613122 RPL37AP61513 92 aaKnown RBP13.65□□□□□ -0.22
CTDP1-208ENST00000613122 A0A1B0GW54 56 aa13.65□□□□□ -0.22
CTDP1-208ENST00000613122 PKD1L2Q7Z442 2459 aa13.64□□□□□ -0.23
CTDP1-208ENST00000613122 KRTAP10-11P60412 298 aa13.64□□□□□ -0.23
CTDP1-208ENST00000613122 LINC00313P59037 77 aa13.63□□□□□ -0.23
CTDP1-208ENST00000613122 MTORP42345 2549 aa13.63□□□□□ -0.23
CTDP1-208ENST00000613122 ST20-AS1Q8NBB2 130 aa13.61□□□□□ -0.23
CTDP1-208ENST00000613122 ANKRD17O75179 2603 aaKnown RBP13.61□□□□□ -0.23
CTDP1-208ENST00000613122 FAM218AQ96MZ4 157 aa13.6□□□□□ -0.23
CTDP1-208ENST00000613122 MUC4Q99102 2169 aa13.59□□□□□ -0.23
CTDP1-208ENST00000613122 PSPHP1O15172 72 aa13.59□□□□□ -0.23
CTDP1-208ENST00000613122 PCSK5Q92824 1860 aa13.58□□□□□ -0.24
CTDP1-208ENST00000613122 CSNK1G2-AS1Q8NCQ2 148 aa13.57□□□□□ -0.24
CTDP1-208ENST00000613122 C19orf73Q9NVV2 129 aa13.55□□□□□ -0.24
CTDP1-208ENST00000613122 ACYP2P14621 99 aa13.54□□□□□ -0.24
CTDP1-208ENST00000613122 A0A096LNT2 108 aa13.54□□□□□ -0.24
CTDP1-208ENST00000613122 PMAIP1Q13794 54 aa13.54□□□□□ -0.24
CTDP1-208ENST00000613122 ATP11AUNQ6ZP68 121 aa13.54□□□□□ -0.24
CTDP1-208ENST00000613122 POLQO75417 2590 aa13.53□□□□□ -0.24
CTDP1-208ENST00000613122 FAM168BA1KXE4 195 aa13.53□□□□□ -0.24
CTDP1-208ENST00000613122 Q6ZQT0 140 aa13.53□□□□□ -0.24
CTDP1-208ENST00000613122 Q96NJ1 140 aa13.53□□□□□ -0.24
CTDP1-208ENST00000613122 C1orf195Q5TG92 126 aa13.52□□□□□ -0.24
CTDP1-208ENST00000613122 LOC110117498A0A087WWA1 95 aa13.51□□□□□ -0.25
CTDP1-208ENST00000613122 VPREB1P12018 145 aa13.51□□□□□ -0.25
CTDP1-208ENST00000613122 CENPFP49454 3210 aa13.5□□□□□ -0.25
CTDP1-208ENST00000613122 KRTAP10-3P60369 221 aa13.49□□□□□ -0.25
CTDP1-208ENST00000613122 ACANP16112 2415 aa13.49□□□□□ -0.25
CTDP1-208ENST00000613122 A0A1B0GU69 56 aa13.49□□□□□ -0.25
CTDP1-208ENST00000613122 EPG5Q9HCE0 2579 aa13.48□□□□□ -0.25
CTDP1-208ENST00000613122 SERTAD4-AS1Q5TG53 156 aa13.46□□□□□ -0.25
CTDP1-208ENST00000613122 IGLV6-57P01721 117 aa13.45□□□□□ -0.26
CTDP1-208ENST00000613122 CDIP1Q9H305 208 aa13.45□□□□□ -0.26
CTDP1-208ENST00000613122 IGLV1-50A0A075B6I6 118 aa13.44□□□□□ -0.26
CTDP1-208ENST00000613122 F8P00451 2351 aa13.44□□□□□ -0.26
CTDP1-208ENST00000613122 H3BPC8 53 aa13.43□□□□□ -0.26
CTDP1-208ENST00000613122 C8orf87E5RJ46 101 aa13.43□□□□□ -0.26
CTDP1-208ENST00000613122 TRBV7-4A0A0J9YYF1 115 aa13.42□□□□□ -0.26
CTDP1-208ENST00000613122 TRAV22A0A0B4J277 110 aa13.42□□□□□ -0.26
CTDP1-208ENST00000613122 SMCPP49901 116 aaPredicted RBP13.41□□□□□ -0.26
CTDP1-208ENST00000613122 A0A087WTM6 91 aa13.39□□□□□ -0.27
CTDP1-208ENST00000613122 TM2D3Q9BRN9 247 aa13.39□□□□□ -0.27
CTDP1-208ENST00000613122 KCNQ1DNQ9H478 68 aa13.38□□□□□ -0.27
CTDP1-208ENST00000613122 PRR34Q9NV39 138 aa13.37□□□□□ -0.27
CTDP1-208ENST00000613122 LITAFQ99732 161 aa13.37□□□□□ -0.27
CTDP1-208ENST00000613122 COX6B2Q6YFQ2 88 aa13.36□□□□□ -0.27
CTDP1-208ENST00000613122 LINC00304Q8N9R0 145 aa13.36□□□□□ -0.27
CTDP1-208ENST00000613122 A8MWP4 228 aa13.36□□□□□ -0.27
CTDP1-208ENST00000613122 C15orf56Q8N910 161 aa13.36□□□□□ -0.27
CTDP1-208ENST00000613122 FLNBO75369 2602 aaKnown RBP13.34□□□□□ -0.27
CTDP1-208ENST00000613122 GIG44P09565 113 aaPredicted RBP13.34□□□□□ -0.27
CTDP1-208ENST00000613122 ZNF861PO60384 105 aa13.33□□□□□ -0.28
CTDP1-208ENST00000613122 LINC00336Q6ZUF6 198 aa13.33□□□□□ -0.28
CTDP1-208ENST00000613122 SMR3BP02814 79 aaPredicted RBP13.32□□□□□ -0.28
CTDP1-208ENST00000613122 LOC101927531A0A1B0GV80 90 aa13.32□□□□□ -0.28
CTDP1-208ENST00000613122 SPAG11AQ6PDA7 123 aa13.32□□□□□ -0.28
CTDP1-208ENST00000613122 MRPL34Q9BQ48 92 aaKnown RBP13.32□□□□□ -0.28
CTDP1-208ENST00000613122 PRO0461Q9UI25 63 aa13.31□□□□□ -0.28
CTDP1-208ENST00000613122 LINC00612Q8N6U2 182 aa13.3□□□□□ -0.28
CTDP1-208ENST00000613122 KRTAP1-3Q8IUG1 177 aa13.3□□□□□ -0.28
CTDP1-208ENST00000613122 SSBP3-AS1Q7Z2R9 100 aa13.29□□□□□ -0.28
CTDP1-208ENST00000613122 C9orf163Q8N9P6 203 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms