RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PRR4Q16378 134 aa8.76□□□□□ -1.01
TNFAIP3-206ENST00000612899 LINC00474Q9P2X8 69 aa8.76□□□□□ -1.01
TNFAIP3-206ENST00000612899 IGHV3OR16-9A0A0B4J2B5 98 aa8.76□□□□□ -1.01
TNFAIP3-206ENST00000612899 PSPHP1O15172 72 aa8.75□□□□□ -1.01
TNFAIP3-206ENST00000612899 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
TNFAIP3-206ENST00000612899 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
TNFAIP3-206ENST00000612899 FLNAP21333 2647 aaKnown RBP8.75□□□□□ -1.01
TNFAIP3-206ENST00000612899 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
TNFAIP3-206ENST00000612899 FHL3Q13643 280 aa8.74□□□□□ -1.01
TNFAIP3-206ENST00000612899 Q6ZRU5 148 aa8.74□□□□□ -1.01
TNFAIP3-206ENST00000612899 NUPR2A6NF83 97 aa8.74□□□□□ -1.01
TNFAIP3-206ENST00000612899 COL27A1Q8IZC6 1860 aaPredicted RBP8.74□□□□□ -1.01
TNFAIP3-206ENST00000612899 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
TNFAIP3-206ENST00000612899 IGLV5-39A0A0G2JS06 123 aa8.73□□□□□ -1.01
TNFAIP3-206ENST00000612899 TMEM254Q8TBM7 123 aa8.73□□□□□ -1.01
TNFAIP3-206ENST00000612899 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
TNFAIP3-206ENST00000612899 LINC01546A6NGU7 62 aa8.73□□□□□ -1.01
TNFAIP3-206ENST00000612899 CFAP46Q8IYW2 2715 aa8.73□□□□□ -1.01
TNFAIP3-206ENST00000612899 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
TNFAIP3-206ENST00000612899 CXCL6P80162 114 aa8.72□□□□□ -1.01
TNFAIP3-206ENST00000612899 HELZ2Q9BYK8 2649 aaKnown RBP8.71□□□□□ -1.01
TNFAIP3-206ENST00000612899 C2orf48Q96LS8 159 aa8.71□□□□□ -1.01
TNFAIP3-206ENST00000612899 ITPR3Q14573 2671 aa8.71□□□□□ -1.01
TNFAIP3-206ENST00000612899 UNC80Q8N2C7 3258 aa8.71□□□□□ -1.02
TNFAIP3-206ENST00000612899 LINC00846Q9NV44 126 aa8.71□□□□□ -1.02
TNFAIP3-206ENST00000612899 AKAP13Q12802 2813 aa8.7□□□□□ -1.02
TNFAIP3-206ENST00000612899 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
TNFAIP3-206ENST00000612899 C10orf25Q5T742 122 aa8.7□□□□□ -1.02
TNFAIP3-206ENST00000612899 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
TNFAIP3-206ENST00000612899 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
TNFAIP3-206ENST00000612899 LINC01561Q8N1V8 128 aa8.68□□□□□ -1.02
TNFAIP3-206ENST00000612899 Q8N3U1 123 aa8.68□□□□□ -1.02
TNFAIP3-206ENST00000612899 X6R8D5 127 aa8.68□□□□□ -1.02
TNFAIP3-206ENST00000612899 MGAQ8IWI9 3026 aa8.67□□□□□ -1.02
TNFAIP3-206ENST00000612899 WDFY4Q6ZS81 3184 aa8.66□□□□□ -1.02
TNFAIP3-206ENST00000612899 A0A087WSZ3 146 aa8.65□□□□□ -1.02
TNFAIP3-206ENST00000612899 LINC01556Q5JQF7 62 aa8.65□□□□□ -1.02
TNFAIP3-206ENST00000612899 IGLV5-52A0A0A0MRZ9 124 aa8.65□□□□□ -1.02
TNFAIP3-206ENST00000612899 FSHBP01225 129 aa8.65□□□□□ -1.02
TNFAIP3-206ENST00000612899 PRLHP81277 87 aa8.65□□□□□ -1.02
TNFAIP3-206ENST00000612899 Q8N9L7 120 aa8.64□□□□□ -1.03
TNFAIP3-206ENST00000612899 CIRBP-AS1Q8TBR5 109 aa8.64□□□□□ -1.03
TNFAIP3-206ENST00000612899 Q9BRP9 147 aa8.64□□□□□ -1.03
TNFAIP3-206ENST00000612899 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
TNFAIP3-206ENST00000612899 KLK9Q2XQG4 91 aa8.63□□□□□ -1.03
TNFAIP3-206ENST00000612899 DEFB116Q30KQ4 102 aa8.63□□□□□ -1.03
TNFAIP3-206ENST00000612899 LINC00208Q96KT6 92 aa8.63□□□□□ -1.03
TNFAIP3-206ENST00000612899 LINC01547P58512 204 aaPredicted RBP8.62□□□□□ -1.03
TNFAIP3-206ENST00000612899 Q6ZVQ6 151 aa8.62□□□□□ -1.03
TNFAIP3-206ENST00000612899 C22orf24Q9Y442 160 aa8.62□□□□□ -1.03
TNFAIP3-206ENST00000612899 KRTAP24-1Q3LI83 254 aa8.62□□□□□ -1.03
TNFAIP3-206ENST00000612899 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
TNFAIP3-206ENST00000612899 C6orf48Q9UBA6 75 aa8.61□□□□□ -1.03
TNFAIP3-206ENST00000612899 TRIOO75962 3097 aa8.6□□□□□ -1.03
TNFAIP3-206ENST00000612899 C1orf134Q5TEV5 83 aa8.59□□□□□ -1.03
TNFAIP3-206ENST00000612899 TRANK1O15050 2925 aa8.58□□□□□ -1.04
TNFAIP3-206ENST00000612899 IGHV6-1A0A0B4J1U7 121 aa8.58□□□□□ -1.04
TNFAIP3-206ENST00000612899 FAM218AQ96MZ4 157 aa8.58□□□□□ -1.04
TNFAIP3-206ENST00000612899 KTN1-AS1Q86SY8 53 aa8.58□□□□□ -1.04
TNFAIP3-206ENST00000612899 Q8NAQ8 132 aa8.57□□□□□ -1.04
TNFAIP3-206ENST00000612899 SMCR5Q8TEV8 140 aa8.57□□□□□ -1.04
TNFAIP3-206ENST00000612899 XIRP2A4UGR9 3374 aa8.57□□□□□ -1.04
TNFAIP3-206ENST00000612899 TEP1Q99973 2627 aaKnown RBP8.56□□□□□ -1.04
TNFAIP3-206ENST00000612899 CDH23Q9H251 3354 aa8.56□□□□□ -1.04
TNFAIP3-206ENST00000612899 LINC00167Q96N53 147 aa8.56□□□□□ -1.04
TNFAIP3-206ENST00000612899 ZNF292O60281 2723 aa8.56□□□□□ -1.04
TNFAIP3-206ENST00000612899 CHD6Q8TD26 2715 aa8.55□□□□□ -1.04
TNFAIP3-206ENST00000612899 KIAA0087Q14695 138 aa8.55□□□□□ -1.04
TNFAIP3-206ENST00000612899 MDFIQ99750 246 aa8.55□□□□□ -1.04
TNFAIP3-206ENST00000612899 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
TNFAIP3-206ENST00000612899 PRR15Q8IV56 129 aa8.53□□□□□ -1.04
TNFAIP3-206ENST00000612899 H3BNG1 76 aa8.53□□□□□ -1.04
TNFAIP3-206ENST00000612899 K7ERS5 55 aa8.53□□□□□ -1.04
TNFAIP3-206ENST00000612899 SPATA3Q8NHX4 192 aa8.53□□□□□ -1.04
TNFAIP3-206ENST00000612899 hDV103S1A0JD37 113 aa8.52□□□□□ -1.05
TNFAIP3-206ENST00000612899 SETXQ7Z333 2677 aaKnown RBP8.51□□□□□ -1.05
TNFAIP3-206ENST00000612899 PCOTHQ58A44 107 aa8.51□□□□□ -1.05
TNFAIP3-206ENST00000612899 A0A096LNT2 108 aa8.51□□□□□ -1.05
TNFAIP3-206ENST00000612899 ERC2-IT1O76042 136 aa8.51□□□□□ -1.05
TNFAIP3-206ENST00000612899 HCG22E2RYF7 251 aa8.5□□□□□ -1.05
TNFAIP3-206ENST00000612899 LCA10Q71F78 164 aa8.5□□□□□ -1.05
TNFAIP3-206ENST00000612899 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
TNFAIP3-206ENST00000612899 RETNLBQ9BQ08 111 aa8.49□□□□□ -1.05
TNFAIP3-206ENST00000612899 LITAFQ99732 161 aa8.49□□□□□ -1.05
TNFAIP3-206ENST00000612899 LINC00588Q9Y4M8 146 aa8.48□□□□□ -1.05
TNFAIP3-206ENST00000612899 DSPP15924 2871 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-206ENST00000612899 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
TNFAIP3-206ENST00000612899 H7BZZ5 65 aa8.48□□□□□ -1.05
TNFAIP3-206ENST00000612899 CSNK1G2-AS1Q8NCQ2 148 aa8.48□□□□□ -1.05
TNFAIP3-206ENST00000612899 VPS13AQ96RL7 3174 aa8.47□□□□□ -1.05
TNFAIP3-206ENST00000612899 TEX15Q9BXT5 2789 aa8.47□□□□□ -1.05
TNFAIP3-206ENST00000612899 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.05
TNFAIP3-206ENST00000612899 Q5XG85 94 aa8.46□□□□□ -1.05
TNFAIP3-206ENST00000612899 H0Y9P7 68 aa8.46□□□□□ -1.06
TNFAIP3-206ENST00000612899 ELOF1P60002 83 aaKnown RBP8.46□□□□□ -1.06
TNFAIP3-206ENST00000612899 STAB1Q9NY15 2570 aa8.46□□□□□ -1.06
TNFAIP3-206ENST00000612899 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
TNFAIP3-206ENST00000612899 C8orf87E5RJ46 101 aa8.44□□□□□ -1.06
TNFAIP3-206ENST00000612899 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
TNFAIP3-206ENST00000612899 SZT2Q5T011 3432 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms