RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LINC00315P59091 139 aa7.67□□□□□ -1.18
FAM3A-221ENST00000612856 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
FAM3A-221ENST00000612856 MED14OSP0DP75 135 aa7.67□□□□□ -1.18
FAM3A-221ENST00000612856 FAM218AQ96MZ4 157 aa7.67□□□□□ -1.18
FAM3A-221ENST00000612856 FAM19A1Q7Z5A9 133 aa7.66□□□□□ -1.18
FAM3A-221ENST00000612856 KIF25-AS1Q9Y6Z4 181 aa7.66□□□□□ -1.18
FAM3A-221ENST00000612856 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.18
FAM3A-221ENST00000612856 ORMDL1Q9P0S3 153 aa7.65□□□□□ -1.18
FAM3A-221ENST00000612856 A0A087WYN8 130 aa7.65□□□□□ -1.19
FAM3A-221ENST00000612856 COX6A2Q02221 97 aa7.65□□□□□ -1.19
FAM3A-221ENST00000612856 WFDC10BQ8IUB3 73 aa7.65□□□□□ -1.19
FAM3A-221ENST00000612856 SCXQ7RTU7 201 aa7.64□□□□□ -1.19
FAM3A-221ENST00000612856 TRBV6-5A0A0K0K1A5 114 aa7.64□□□□□ -1.19
FAM3A-221ENST00000612856 TRBV6-4A0A1B0GX49 114 aa7.64□□□□□ -1.19
FAM3A-221ENST00000612856 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
FAM3A-221ENST00000612856 UPK3BQ9BT76 320 aa7.64□□□□□ -1.19
FAM3A-221ENST00000612856 C9orf85Q96MD7 179 aa7.64□□□□□ -1.19
FAM3A-221ENST00000612856 IGLV4-60A0A075B6I1 120 aa7.63□□□□□ -1.19
FAM3A-221ENST00000612856 LITAFQ99732 161 aa7.63□□□□□ -1.19
FAM3A-221ENST00000612856 OVOL2Q9BRP0 275 aa7.63□□□□□ -1.19
FAM3A-221ENST00000612856 NDUFA1O15239 70 aa7.63□□□□□ -1.19
FAM3A-221ENST00000612856 Q8N3U1 123 aa7.63□□□□□ -1.19
FAM3A-221ENST00000612856 IL17DQ8TAD2 202 aa7.62□□□□□ -1.19
FAM3A-221ENST00000612856 SMIM11BQ8TCY0 68 aa7.62□□□□□ -1.19
FAM3A-221ENST00000612856 SOSTDC1Q6X4U4 206 aa7.62□□□□□ -1.19
FAM3A-221ENST00000612856 RPS28P62857 69 aaKnown RBP7.62□□□□□ -1.19
FAM3A-221ENST00000612856 FHL2Q14192 279 aa7.62□□□□□ -1.19
FAM3A-221ENST00000612856 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
FAM3A-221ENST00000612856 HIGD2AQ9BW72 106 aa7.61□□□□□ -1.19
FAM3A-221ENST00000612856 KRTAP10-11P60412 298 aa7.61□□□□□ -1.19
FAM3A-221ENST00000612856 C9orf116Q5BN46 136 aaPredicted RBP7.61□□□□□ -1.19
FAM3A-221ENST00000612856 UBE2D4Q9Y2X8 147 aa7.61□□□□□ -1.19
FAM3A-221ENST00000612856 LINC00336Q6ZUF6 198 aa7.61□□□□□ -1.19
FAM3A-221ENST00000612856 H0YGX0 51 aa7.6□□□□□ -1.19
FAM3A-221ENST00000612856 KLK9Q2XQG4 91 aa7.6□□□□□ -1.19
FAM3A-221ENST00000612856 V9GYY9 64 aa7.6□□□□□ -1.19
FAM3A-221ENST00000612856 TENM3Q9P273 2699 aa7.6□□□□□ -1.19
FAM3A-221ENST00000612856 VWFP04275 2813 aa7.59□□□□□ -1.19
FAM3A-221ENST00000612856 TENM1Q9UKZ4 2725 aa7.59□□□□□ -1.19
FAM3A-221ENST00000612856 IGKV2-28A0A075B6P5 120 aa7.59□□□□□ -1.19
FAM3A-221ENST00000612856 A0A087WZ39 114 aa7.59□□□□□ -1.19
FAM3A-221ENST00000612856 F8WEM9 126 aa7.59□□□□□ -1.19
FAM3A-221ENST00000612856 IGKV2D-28P01615 120 aa7.59□□□□□ -1.19
FAM3A-221ENST00000612856 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
FAM3A-221ENST00000612856 Q6JHZ5 121 aa7.59□□□□□ -1.2
FAM3A-221ENST00000612856 K7EIL1 84 aa7.58□□□□□ -1.2
FAM3A-221ENST00000612856 NDUFC2O95298 119 aa7.58□□□□□ -1.2
FAM3A-221ENST00000612856 RPL28P46779 137 aaKnown RBP7.58□□□□□ -1.2
FAM3A-221ENST00000612856 PDZD2O15018 2839 aa7.58□□□□□ -1.2
FAM3A-221ENST00000612856 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
FAM3A-221ENST00000612856 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
FAM3A-221ENST00000612856 C2orf48Q96LS8 159 aa7.58□□□□□ -1.2
FAM3A-221ENST00000612856 ETDCA0A1B0GVM5 59 aa7.57□□□□□ -1.2
FAM3A-221ENST00000612856 TIMM17BO60830 172 aa7.57□□□□□ -1.2
FAM3A-221ENST00000612856 LINC01561Q8N1V8 128 aa7.57□□□□□ -1.2
FAM3A-221ENST00000612856 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
FAM3A-221ENST00000612856 PRO0628Q9UI54 55 aa7.57□□□□□ -1.2
FAM3A-221ENST00000612856 PRR3P79522 188 aaKnown RBP7.56□□□□□ -1.2
FAM3A-221ENST00000612856 LELP1Q5T871 98 aa7.56□□□□□ -1.2
FAM3A-221ENST00000612856 LINC00959A0A1B0GUT2 108 aa7.55□□□□□ -1.2
FAM3A-221ENST00000612856 X6R8D5 127 aa7.55□□□□□ -1.2
FAM3A-221ENST00000612856 TGP01266 2768 aa7.55□□□□□ -1.2
FAM3A-221ENST00000612856 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
FAM3A-221ENST00000612856 OXTP01178 125 aa7.55□□□□□ -1.2
FAM3A-221ENST00000612856 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
FAM3A-221ENST00000612856 RPL37AP8A6NKH3 93 aa7.55□□□□□ -1.2
FAM3A-221ENST00000612856 UNQ6190/PRO20217Q6UXQ8 127 aa7.55□□□□□ -1.2
FAM3A-221ENST00000612856 CHCHD7Q9BUK0 85 aa7.55□□□□□ -1.2
FAM3A-221ENST00000612856 UBE2AP49459 152 aa7.54□□□□□ -1.2
FAM3A-221ENST00000612856 FUSP35637 526 aaKnown RBP eCLIP7.54□□□□□ -1.2
FAM3A-221ENST00000612856 SYCNQ0VAF6 134 aa7.54□□□□□ -1.2
FAM3A-221ENST00000612856 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
FAM3A-221ENST00000612856 C11orf72Q8NBR9 251 aa7.54□□□□□ -1.2
FAM3A-221ENST00000612856 ESRGQ1W209 222 aa7.53□□□□□ -1.2
FAM3A-221ENST00000612856 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
FAM3A-221ENST00000612856 JMJD7-PLA2G4BH0Y9G9 81 aa7.52□□□□□ -1.2
FAM3A-221ENST00000612856 LYPD5Q6UWN5 251 aa7.52□□□□□ -1.21
FAM3A-221ENST00000612856 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
FAM3A-221ENST00000612856 SEC61GP60059 68 aa7.52□□□□□ -1.21
FAM3A-221ENST00000612856 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
FAM3A-221ENST00000612856 NDUFC2-KCTD14E9PQ53 114 aa7.52□□□□□ -1.21
FAM3A-221ENST00000612856 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
FAM3A-221ENST00000612856 NUPR2A6NF83 97 aa7.5□□□□□ -1.21
FAM3A-221ENST00000612856 CCKP06307 115 aa7.5□□□□□ -1.21
FAM3A-221ENST00000612856 TMEM256-PLSCR3K7ERE1 68 aa7.5□□□□□ -1.21
FAM3A-221ENST00000612856 A8MTW9 85 aa7.5□□□□□ -1.21
FAM3A-221ENST00000612856 C6orf99Q4VX62 202 aa7.49□□□□□ -1.21
FAM3A-221ENST00000612856 PRR4Q16378 134 aa7.49□□□□□ -1.21
FAM3A-221ENST00000612856 Q5XG85 94 aa7.49□□□□□ -1.21
FAM3A-221ENST00000612856 CD164L2Q6UWJ8 174 aa7.48□□□□□ -1.21
FAM3A-221ENST00000612856 WIPF1O43516 503 aa7.48□□□□□ -1.21
FAM3A-221ENST00000612856 NTM-AS1Q6ZSK4 140 aa7.48□□□□□ -1.21
FAM3A-221ENST00000612856 Q8NAQ8 132 aa7.48□□□□□ -1.21
FAM3A-221ENST00000612856 TRBV7-6A0A0J9YX20 115 aa7.47□□□□□ -1.21
FAM3A-221ENST00000612856 TRAV7A0A075B6U4 112 aa7.45□□□□□ -1.22
FAM3A-221ENST00000612856 GIG44P09565 113 aaPredicted RBP7.44□□□□□ -1.22
FAM3A-221ENST00000612856 ATP5EP2Q5VTU8 51 aa7.44□□□□□ -1.22
FAM3A-221ENST00000612856 Q8N9L7 120 aa7.44□□□□□ -1.22
FAM3A-221ENST00000612856 MUC7Q8TAX7 377 aa7.44□□□□□ -1.22
FAM3A-221ENST00000612856 C19orf73Q9NVV2 129 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms