RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 CAMK2N2Q96S95 79 aa5.31□□□□□ -1.56
TARDBP-213ENST00000611963 NHP2Q9NX24 153 aaKnown RBP5.31□□□□□ -1.56
TARDBP-213ENST00000611963 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
TARDBP-213ENST00000611963 COX11Q9Y6N1 276 aa5.31□□□□□ -1.56
TARDBP-213ENST00000611963 COL5A1-AS1Q5SY13 56 aa5.3□□□□□ -1.56
TARDBP-213ENST00000611963 Q6ZR54 194 aa5.3□□□□□ -1.56
TARDBP-213ENST00000611963 Q6ZRN7 208 aaPredicted RBP5.3□□□□□ -1.56
TARDBP-213ENST00000611963 Q6ZVH6 145 aa5.3□□□□□ -1.56
TARDBP-213ENST00000611963 LINC00308Q8TCZ7 52 aa5.3□□□□□ -1.56
TARDBP-213ENST00000611963 C2orf48Q96LS8 159 aa5.3□□□□□ -1.56
TARDBP-213ENST00000611963 A4D1N5 150 aa5.29□□□□□ -1.56
TARDBP-213ENST00000611963 A6NDN8 102 aa5.29□□□□□ -1.56
TARDBP-213ENST00000611963 SLPIP03973 132 aa5.29□□□□□ -1.56
TARDBP-213ENST00000611963 IFITM1P13164 125 aa5.29□□□□□ -1.56
TARDBP-213ENST00000611963 CARD19Q96LW7 228 aa5.29□□□□□ -1.56
TARDBP-213ENST00000611963 TRBV30A0A0K0K1B3 111 aa5.28□□□□□ -1.56
TARDBP-213ENST00000611963 TAX1BP3O14907 124 aa5.28□□□□□ -1.56
TARDBP-213ENST00000611963 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
TARDBP-213ENST00000611963 CFC1P0CG37 223 aa5.28□□□□□ -1.56
TARDBP-213ENST00000611963 RPL24P83731 157 aaKnown RBP5.28□□□□□ -1.56
TARDBP-213ENST00000611963 SYCNQ0VAF6 134 aa5.28□□□□□ -1.56
TARDBP-213ENST00000611963 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
TARDBP-213ENST00000611963 RAB37Q96AX2 223 aa5.28□□□□□ -1.56
TARDBP-213ENST00000611963 A0A1B0GWB2 263 aa5.27□□□□□ -1.57
TARDBP-213ENST00000611963 LRCOL1A6NCL2 159 aa5.27□□□□□ -1.57
TARDBP-213ENST00000611963 F8WDY8 70 aa5.27□□□□□ -1.57
TARDBP-213ENST00000611963 COX17Q14061 63 aa5.27□□□□□ -1.57
TARDBP-213ENST00000611963 NAA38Q9BRA0 125 aaKnown RBP5.27□□□□□ -1.57
TARDBP-213ENST00000611963 SND1-IT1Q9HBX3 110 aa5.27□□□□□ -1.57
TARDBP-213ENST00000611963 DNAH5Q8TE73 4624 aa5.27□□□□□ -1.57
TARDBP-213ENST00000611963 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
TARDBP-213ENST00000611963 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.26□□□□□ -1.57
TARDBP-213ENST00000611963 LBHQ53QV2 105 aaPredicted RBP5.26□□□□□ -1.57
TARDBP-213ENST00000611963 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.25□□□□□ -1.57
TARDBP-213ENST00000611963 A0A1B0GV90 55 aa5.25□□□□□ -1.57
TARDBP-213ENST00000611963 GAGE2EQ4V326 116 aa5.25□□□□□ -1.57
TARDBP-213ENST00000611963 C14orf177Q52M58 125 aa5.25□□□□□ -1.57
TARDBP-213ENST00000611963 C1orf134Q5TEV5 83 aa5.25□□□□□ -1.57
TARDBP-213ENST00000611963 Q8NDZ9 215 aa5.25□□□□□ -1.57
TARDBP-213ENST00000611963 COPS9Q8WXC6 57 aa5.25□□□□□ -1.57
TARDBP-213ENST00000611963 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
TARDBP-213ENST00000611963 GAGE2DQ9UEU5 116 aa5.25□□□□□ -1.57
TARDBP-213ENST00000611963 A0A0B4J2C4 111 aa5.24□□□□□ -1.57
TARDBP-213ENST00000611963 NDUFC2-KCTD14E9PQ53 114 aa5.24□□□□□ -1.57
TARDBP-213ENST00000611963 H7C2G1 150 aa5.24□□□□□ -1.57
TARDBP-213ENST00000611963 RTL8CO15255 209 aa5.24□□□□□ -1.57
TARDBP-213ENST00000611963 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
TARDBP-213ENST00000611963 RPL18AQ02543 176 aaKnown RBP5.24□□□□□ -1.57
TARDBP-213ENST00000611963 Q6ZRP5 223 aa5.24□□□□□ -1.57
TARDBP-213ENST00000611963 PPDPFQ9H3Y8 114 aa5.24□□□□□ -1.57
TARDBP-213ENST00000611963 PKD1P98161 4303 aa5.24□□□□□ -1.57
TARDBP-213ENST00000611963 PKHD1P08F94 4074 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 IGKV2-28A0A075B6P5 120 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 A0A1B0GVY2 172 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 C9orf118A6NHY6 69 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 H3BUT2 72 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 TSPAN13O95857 204 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 IGKV2D-28P01615 120 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 CNBPP62633 177 aaKnown RBP5.23□□□□□ -1.57
TARDBP-213ENST00000611963 PRR3P79522 188 aaKnown RBP5.23□□□□□ -1.57
TARDBP-213ENST00000611963 RNF151Q2KHN1 245 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 PRO1854Q9UHT4 67 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 DNAH8Q96JB1 4490 aa5.23□□□□□ -1.57
TARDBP-213ENST00000611963 A0A087WTM6 91 aa5.22□□□□□ -1.57
TARDBP-213ENST00000611963 LOC107984156A0A0G2JMH3 177 aa5.22□□□□□ -1.57
TARDBP-213ENST00000611963 NCR3O14931 201 aa5.22□□□□□ -1.57
TARDBP-213ENST00000611963 FUSP35637 526 aaKnown RBP eCLIP5.22□□□□□ -1.573e-10■■□□□ 12.1
TARDBP-213ENST00000611963 ARL17AQ8IVW1 177 aa5.22□□□□□ -1.57
TARDBP-213ENST00000611963 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
TARDBP-213ENST00000611963 KIAA1109Q2LD37 5005 aa5.22□□□□□ -1.57
TARDBP-213ENST00000611963 HERC2O95714 4834 aa5.22□□□□□ -1.57
TARDBP-213ENST00000611963 LOC107984640A0A0U1RRK4 108 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 TLX1NBP0CAT3 122 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 GAGE2BQ13066 116 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 Q1RN00 199 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 LINC01620Q4KN68 170 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 C9orf129Q5T035 196 aaKnown RBP5.21□□□□□ -1.58
TARDBP-213ENST00000611963 LINC00336Q6ZUF6 198 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 LINC00337Q8N6G1 96 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 Q8N814 137 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 CDIP1Q9H305 208 aa5.21□□□□□ -1.58
TARDBP-213ENST00000611963 OR13C6PQ8NH95 151 aa5.2□□□□□ -1.58
TARDBP-213ENST00000611963 A0A096LNI7 61 aa5.19□□□□□ -1.58
TARDBP-213ENST00000611963 TRAV13-2A0A0B4J235 113 aa5.19□□□□□ -1.58
TARDBP-213ENST00000611963 IGKV2-24A0A0C4DH68 120 aa5.19□□□□□ -1.58
TARDBP-213ENST00000611963 A0A1W2PPM0 123 aa5.19□□□□□ -1.58
TARDBP-213ENST00000611963 NDUFC2O95298 119 aa5.19□□□□□ -1.58
TARDBP-213ENST00000611963 VPREB1P12018 145 aa5.19□□□□□ -1.58
TARDBP-213ENST00000611963 VAMP3Q15836 100 aa5.19□□□□□ -1.58
TARDBP-213ENST00000611963 KRTAP17-1Q9BYP8 105 aa5.19□□□□□ -1.58
TARDBP-213ENST00000611963 FAM168BA1KXE4 195 aa5.18□□□□□ -1.58
TARDBP-213ENST00000611963 TRIAP1O43715 76 aa5.18□□□□□ -1.58
TARDBP-213ENST00000611963 CHTF8P0CG12 524 aa5.18□□□□□ -1.58
TARDBP-213ENST00000611963 PSMB2P49721 201 aa5.18□□□□□ -1.58
TARDBP-213ENST00000611963 SERTAD4-AS1Q5TG53 156 aa5.18□□□□□ -1.58
TARDBP-213ENST00000611963 C9orf163Q8N9P6 203 aa5.18□□□□□ -1.58
TARDBP-213ENST00000611963 FABP2P12104 132 aa5.17□□□□□ -1.58
TARDBP-213ENST00000611963 SMIM11BQ8TCY0 68 aa5.17□□□□□ -1.58
TARDBP-213ENST00000611963 TRBV10-2A0A0K0K1G8 114 aa5.16□□□□□ -1.58
TARDBP-213ENST00000611963 GAGE10A6NGK3 116 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms