RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 WFDC11Q8NEX6 87 aa8.17□□□□□ -1.1
TPM3-223ENST00000611659 TRAV7A0A075B6U4 112 aa8.16□□□□□ -1.1
TPM3-223ENST00000611659 H7BZZ5 65 aa8.16□□□□□ -1.1
TPM3-223ENST00000611659 C6orf223Q8N319 242 aa8.16□□□□□ -1.1
TPM3-223ENST00000611659 GCN1Q92616 2671 aaKnown RBP8.16□□□□□ -1.1
TPM3-223ENST00000611659 RMI2Q96E14 147 aa8.16□□□□□ -1.1
TPM3-223ENST00000611659 LINC01006Q8NI28 216 aa8.16□□□□□ -1.1
TPM3-223ENST00000611659 REG3AQ06141 175 aa8.15□□□□□ -1.1
TPM3-223ENST00000611659 C10orf25Q5T742 122 aa8.15□□□□□ -1.1
TPM3-223ENST00000611659 UNQ6190/PRO20217Q6UXQ8 127 aa8.15□□□□□ -1.1
TPM3-223ENST00000611659 WIPF1O43516 503 aa8.14□□□□□ -1.11
TPM3-223ENST00000611659 IGLV1-51P01701 117 aa8.14□□□□□ -1.11
TPM3-223ENST00000611659 PRO0255Q9UI72 69 aa8.14□□□□□ -1.11
TPM3-223ENST00000611659 DEFB4AO15263 64 aa8.14□□□□□ -1.11
TPM3-223ENST00000611659 UBR5O95071 2799 aaPredicted RBP8.13□□□□□ -1.11
TPM3-223ENST00000611659 LOC110117498A0A087WWA1 95 aa8.13□□□□□ -1.11
TPM3-223ENST00000611659 F8WEM9 126 aa8.13□□□□□ -1.11
TPM3-223ENST00000611659 LINC00482Q8N8I6 264 aa8.13□□□□□ -1.11
TPM3-223ENST00000611659 SERP1Q9Y6X1 66 aa8.13□□□□□ -1.11
TPM3-223ENST00000611659 SPAG11BQ08648 103 aa8.12□□□□□ -1.11
TPM3-223ENST00000611659 ITPR2Q14571 2701 aa8.11□□□□□ -1.11
TPM3-223ENST00000611659 IGHV4-28A0A0C4DH34 117 aa8.11□□□□□ -1.11
TPM3-223ENST00000611659 XAGE1AQ9HD64 81 aa8.11□□□□□ -1.11
TPM3-223ENST00000611659 HIVEP2P31629 2446 aa8.1□□□□□ -1.11
TPM3-223ENST00000611659 TM2D3Q9BRN9 247 aa8.1□□□□□ -1.11
TPM3-223ENST00000611659 CYSRT1A8MQ03 144 aa8.1□□□□□ -1.11
TPM3-223ENST00000611659 MUC7Q8TAX7 377 aa8.1□□□□□ -1.11
TPM3-223ENST00000611659 KLKP1Q107X0 134 aa8.09□□□□□ -1.11
TPM3-223ENST00000611659 LINC00336Q6ZUF6 198 aa8.08□□□□□ -1.12
TPM3-223ENST00000611659 KRTAP1-3Q8IUG1 177 aa8.08□□□□□ -1.12
TPM3-223ENST00000611659 IGLV6-57P01721 117 aa8.07□□□□□ -1.12
TPM3-223ENST00000611659 CXCL6P80162 114 aa8.07□□□□□ -1.12
TPM3-223ENST00000611659 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
TPM3-223ENST00000611659 HTN3P15516 51 aa8.07□□□□□ -1.12
TPM3-223ENST00000611659 PDE6GP18545 87 aa8.07□□□□□ -1.12
TPM3-223ENST00000611659 BCE1O60756 84 aa8.07□□□□□ -1.12
TPM3-223ENST00000611659 LINC00612Q8N6U2 182 aa8.06□□□□□ -1.12
TPM3-223ENST00000611659 X6R8D5 127 aa8.06□□□□□ -1.12
TPM3-223ENST00000611659 Q8N9L7 120 aa8.06□□□□□ -1.12
TPM3-223ENST00000611659 KLK12Q9UKR0 248 aa8.06□□□□□ -1.12
TPM3-223ENST00000611659 TENM4Q6N022 2769 aa8.06□□□□□ -1.12
TPM3-223ENST00000611659 C9orf66Q5T8R8 295 aa8.05□□□□□ -1.12
TPM3-223ENST00000611659 ZNF73O43830 326 aaPredicted RBP8.04□□□□□ -1.12
TPM3-223ENST00000611659 COX7BP24311 80 aa8.04□□□□□ -1.12
TPM3-223ENST00000611659 DEFB135Q30KP9 77 aa8.04□□□□□ -1.12
TPM3-223ENST00000611659 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
TPM3-223ENST00000611659 MIFP14174 115 aa8.04□□□□□ -1.12
TPM3-223ENST00000611659 NREPQ16612 68 aa8.04□□□□□ -1.12
TPM3-223ENST00000611659 FASNP49327 2511 aaKnown RBP8.04□□□□□ -1.12
TPM3-223ENST00000611659 SMIM26A0A096LP01 95 aa8.03□□□□□ -1.12
TPM3-223ENST00000611659 EPM2AB3EWF7 344 aa8.03□□□□□ -1.12
TPM3-223ENST00000611659 DAD1P61803 113 aa8.03□□□□□ -1.12
TPM3-223ENST00000611659 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
TPM3-223ENST00000611659 MRAPQ8TCY5 172 aa8.03□□□□□ -1.12
TPM3-223ENST00000611659 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
TPM3-223ENST00000611659 BPY2O14599 106 aa8.03□□□□□ -1.12
TPM3-223ENST00000611659 SMR3AQ99954 134 aa8.03□□□□□ -1.12
TPM3-223ENST00000611659 VWFP04275 2813 aa8.02□□□□□ -1.12
TPM3-223ENST00000611659 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
TPM3-223ENST00000611659 TRBV7-4A0A0J9YYF1 115 aa8.02□□□□□ -1.13
TPM3-223ENST00000611659 IGHV4-30-4P0DP06 118 aa8.02□□□□□ -1.13
TPM3-223ENST00000611659 C1orf43Q9BWL3 253 aa8.02□□□□□ -1.13
TPM3-223ENST00000611659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.02□□□□□ -1.13
TPM3-223ENST00000611659 C6orf48Q9UBA6 75 aa8.01□□□□□ -1.13
TPM3-223ENST00000611659 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
TPM3-223ENST00000611659 TMEM254Q8TBM7 123 aa8□□□□□ -1.13
TPM3-223ENST00000611659 HECTD1Q9ULT8 2610 aa8□□□□□ -1.13
TPM3-223ENST00000611659 H3BQ85 93 aa8□□□□□ -1.13
TPM3-223ENST00000611659 HIGD2BQ4VC39 106 aa8□□□□□ -1.13
TPM3-223ENST00000611659 HELZ2Q9BYK8 2649 aaKnown RBP8□□□□□ -1.13
TPM3-223ENST00000611659 LYRM9A8MSI8 78 aa8□□□□□ -1.13
TPM3-223ENST00000611659 NDUFC1O43677 76 aa8□□□□□ -1.13
TPM3-223ENST00000611659 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
TPM3-223ENST00000611659 MPLKIPQ8TAP9 179 aa7.98□□□□□ -1.13
TPM3-223ENST00000611659 C16orf95Q9H693 158 aa7.98□□□□□ -1.13
TPM3-223ENST00000611659 CELA1Q9UNI1 258 aa7.98□□□□□ -1.13
TPM3-223ENST00000611659 PKIGQ9Y2B9 76 aa7.98□□□□□ -1.13
TPM3-223ENST00000611659 C3orf84H3BNL1 204 aa7.98□□□□□ -1.13
TPM3-223ENST00000611659 CAMK2N2Q96S95 79 aa7.97□□□□□ -1.13
TPM3-223ENST00000611659 DEFB105AQ8NG35 78 aa7.96□□□□□ -1.13
TPM3-223ENST00000611659 BRK1Q8WUW1 75 aa7.96□□□□□ -1.13
TPM3-223ENST00000611659 LELP1Q5T871 98 aa7.96□□□□□ -1.14
TPM3-223ENST00000611659 PDZD2O15018 2839 aa7.96□□□□□ -1.14
TPM3-223ENST00000611659 FAM229BQ4G0N7 80 aa7.94□□□□□ -1.14
TPM3-223ENST00000611659 IGKV4-1P06312 121 aa7.94□□□□□ -1.14
TPM3-223ENST00000611659 VPREB1P12018 145 aa7.94□□□□□ -1.14
TPM3-223ENST00000611659 GVQW2A0A096LPI5 108 aaPredicted RBP7.94□□□□□ -1.14
TPM3-223ENST00000611659 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
TPM3-223ENST00000611659 KRTAP1-1Q07627 177 aa7.94□□□□□ -1.14
TPM3-223ENST00000611659 PRR34Q9NV39 138 aa7.94□□□□□ -1.14
TPM3-223ENST00000611659 UNC79Q9P2D8 2635 aa7.93□□□□□ -1.14
TPM3-223ENST00000611659 PRYO14603 147 aa7.93□□□□□ -1.14
TPM3-223ENST00000611659 ANK3Q12955 4377 aaKnown RBP7.93□□□□□ -1.14
TPM3-223ENST00000611659 A0A0U1RQV1 116 aa7.93□□□□□ -1.14
TPM3-223ENST00000611659 HIGD2AQ9BW72 106 aa7.93□□□□□ -1.14
TPM3-223ENST00000611659 KRTAP10-3P60369 221 aa7.92□□□□□ -1.14
TPM3-223ENST00000611659 M0R378 163 aa7.92□□□□□ -1.14
TPM3-223ENST00000611659 FUSP35637 526 aaKnown RBP eCLIP7.92□□□□□ -1.14
TPM3-223ENST00000611659 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
TPM3-223ENST00000611659 Q6ZRU5 148 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms