RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
CTSA-212ENST00000606394 CFC1P0CG37 223 aa8.58□□□□□ -1.04
CTSA-212ENST00000606394 IFITM1P13164 125 aa8.58□□□□□ -1.04
CTSA-212ENST00000606394 COPS9Q8WXC6 57 aa8.58□□□□□ -1.04
CTSA-212ENST00000606394 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
CTSA-212ENST00000606394 LITAFQ99732 161 aa8.58□□□□□ -1.04
CTSA-212ENST00000606394 HERV-K104P63124 156 aa8.57□□□□□ -1.04
CTSA-212ENST00000606394 C1orf43Q9BWL3 253 aa8.56□□□□□ -1.04
CTSA-212ENST00000606394 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
CTSA-212ENST00000606394 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
CTSA-212ENST00000606394 K7ERU9 68 aa8.55□□□□□ -1.04
CTSA-212ENST00000606394 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
CTSA-212ENST00000606394 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
CTSA-212ENST00000606394 IGLV4-60A0A075B6I1 120 aa8.54□□□□□ -1.04
CTSA-212ENST00000606394 TRBV20-1A0A075B6N2 111 aa8.54□□□□□ -1.04
CTSA-212ENST00000606394 F8W1H4 67 aa8.54□□□□□ -1.04
CTSA-212ENST00000606394 PRSS2P07478 247 aa8.54□□□□□ -1.04
CTSA-212ENST00000606394 OCIAD2Q56VL3 154 aa8.54□□□□□ -1.04
CTSA-212ENST00000606394 SS18Q15532 418 aa8.53□□□□□ -1.04
CTSA-212ENST00000606394 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
CTSA-212ENST00000606394 COX7B2Q8TF08 81 aa8.53□□□□□ -1.04
CTSA-212ENST00000606394 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
CTSA-212ENST00000606394 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
CTSA-212ENST00000606394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
CTSA-212ENST00000606394 IGKV3OR2-268A0A0C4DH90 116 aa8.52□□□□□ -1.05
CTSA-212ENST00000606394 USP17L23D6RBM5 183 aa8.52□□□□□ -1.05
CTSA-212ENST00000606394 TMEM262E9PQX1 116 aa8.52□□□□□ -1.05
CTSA-212ENST00000606394 RBX1P62877 108 aa8.52□□□□□ -1.05
CTSA-212ENST00000606394 Q1RN00 199 aa8.52□□□□□ -1.05
CTSA-212ENST00000606394 MEIG1Q5JSS6 88 aa8.52□□□□□ -1.05
CTSA-212ENST00000606394 ADAMTSL4-AS1Q5T5F5 129 aa8.52□□□□□ -1.05
CTSA-212ENST00000606394 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.05
CTSA-212ENST00000606394 LINC00959A0A1B0GUT2 108 aa8.51□□□□□ -1.05
CTSA-212ENST00000606394 H3BMG7 143 aa8.51□□□□□ -1.05
CTSA-212ENST00000606394 CRPP02741 224 aa8.51□□□□□ -1.05
CTSA-212ENST00000606394 PSMB2P49721 201 aa8.51□□□□□ -1.05
CTSA-212ENST00000606394 SDIM1Q6ZPB5 146 aa8.51□□□□□ -1.05
CTSA-212ENST00000606394 A0A087WZ39 114 aa8.5□□□□□ -1.05
CTSA-212ENST00000606394 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
CTSA-212ENST00000606394 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
CTSA-212ENST00000606394 LINC01600Q96MT4 127 aa8.5□□□□□ -1.05
CTSA-212ENST00000606394 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
CTSA-212ENST00000606394 PANO1I0J062 215 aa8.49□□□□□ -1.05
CTSA-212ENST00000606394 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
CTSA-212ENST00000606394 SCGB1C2P0DMR2 95 aa8.49□□□□□ -1.05
CTSA-212ENST00000606394 LINC00308Q8TCZ7 52 aa8.49□□□□□ -1.05
CTSA-212ENST00000606394 ANGP03950 147 aaKnown RBP8.48□□□□□ -1.05
CTSA-212ENST00000606394 NPC2P61916 151 aa8.48□□□□□ -1.05
CTSA-212ENST00000606394 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
CTSA-212ENST00000606394 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
CTSA-212ENST00000606394 PRO0461Q9UI25 63 aa8.47□□□□□ -1.05
CTSA-212ENST00000606394 CBY1Q9Y3M2 126 aa8.47□□□□□ -1.05
CTSA-212ENST00000606394 H7C2G1 150 aa8.46□□□□□ -1.06
CTSA-212ENST00000606394 TCL1BO95988 128 aa8.46□□□□□ -1.06
CTSA-212ENST00000606394 COX6CP09669 75 aa8.46□□□□□ -1.06
CTSA-212ENST00000606394 RPL13AP40429 203 aaKnown RBP8.46□□□□□ -1.06
CTSA-212ENST00000606394 CNBPP62633 177 aaKnown RBP8.46□□□□□ -1.06
CTSA-212ENST00000606394 DAND5Q8N907 189 aa8.46□□□□□ -1.06
CTSA-212ENST00000606394 PRR34Q9NV39 138 aa8.46□□□□□ -1.06
CTSA-212ENST00000606394 J3QR89 54 aa8.45□□□□□ -1.06
CTSA-212ENST00000606394 ATXN8Q156A1 80 aa8.45□□□□□ -1.06
CTSA-212ENST00000606394 RNF151Q2KHN1 245 aa8.45□□□□□ -1.06
CTSA-212ENST00000606394 Q8IZM0 81 aa8.45□□□□□ -1.06
CTSA-212ENST00000606394 A0A087WYN8 130 aa8.44□□□□□ -1.06
CTSA-212ENST00000606394 XCL1P47992 114 aa8.44□□□□□ -1.06
CTSA-212ENST00000606394 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
CTSA-212ENST00000606394 LINC00269Q8N2A0 174 aa8.44□□□□□ -1.06
CTSA-212ENST00000606394 C7orf33Q8WU49 177 aa8.44□□□□□ -1.06
CTSA-212ENST00000606394 VPS25Q9BRG1 176 aa8.44□□□□□ -1.06
CTSA-212ENST00000606394 TRAV8-4A0A0B4J246 113 aa8.43□□□□□ -1.06
CTSA-212ENST00000606394 A0A0U1RRA0 63 aa8.43□□□□□ -1.06
CTSA-212ENST00000606394 TRIAP1O43715 76 aa8.43□□□□□ -1.06
CTSA-212ENST00000606394 REG3AQ06141 175 aa8.43□□□□□ -1.06
CTSA-212ENST00000606394 CLPSL2Q6UWE3 100 aa8.43□□□□□ -1.06
CTSA-212ENST00000606394 CD164L2Q6UWJ8 174 aa8.43□□□□□ -1.06
CTSA-212ENST00000606394 SPACA4Q8TDM5 124 aa8.43□□□□□ -1.06
CTSA-212ENST00000606394 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
CTSA-212ENST00000606394 COX7A2LO14548 114 aa8.42□□□□□ -1.06
CTSA-212ENST00000606394 CXCL5P42830 114 aa8.42□□□□□ -1.06
CTSA-212ENST00000606394 KRTAP10-8P60410 259 aa8.42□□□□□ -1.06
CTSA-212ENST00000606394 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
CTSA-212ENST00000606394 PLAC8Q9NZF1 115 aa8.42□□□□□ -1.06
CTSA-212ENST00000606394 M0QXV9 152 aa8.41□□□□□ -1.06
CTSA-212ENST00000606394 LINC00158P58513 81 aa8.41□□□□□ -1.06
CTSA-212ENST00000606394 CFAP161Q6P656 301 aa8.41□□□□□ -1.06
CTSA-212ENST00000606394 KRTAP26-1Q6PEX3 210 aa8.41□□□□□ -1.06
CTSA-212ENST00000606394 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
CTSA-212ENST00000606394 MTURNQ8N3F0 131 aa8.41□□□□□ -1.06
CTSA-212ENST00000606394 CHCHD10Q8WYQ3 142 aaPredicted RBP8.41□□□□□ -1.06
CTSA-212ENST00000606394 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
CTSA-212ENST00000606394 MIR7-3HGQ8N6C7 128 aa8.4□□□□□ -1.06
CTSA-212ENST00000606394 TRAV13-2A0A0B4J235 113 aa8.39□□□□□ -1.07
CTSA-212ENST00000606394 MALP21145 153 aa8.39□□□□□ -1.07
CTSA-212ENST00000606394 CKS1BP61024 79 aa8.39□□□□□ -1.07
CTSA-212ENST00000606394 REG3GQ6UW15 175 aa8.39□□□□□ -1.07
CTSA-212ENST00000606394 C9JAW5 83 aa8.38□□□□□ -1.07
CTSA-212ENST00000606394 SLC25A20O43772 301 aa8.38□□□□□ -1.07
CTSA-212ENST00000606394 SMCPP49901 116 aaPredicted RBP8.38□□□□□ -1.07
CTSA-212ENST00000606394 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
CTSA-212ENST00000606394 TEN1Q86WV5 123 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms