RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 DYNAPQ8N1N2 210 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 Q8TAT8 98 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 C10orf105Q8TEF2 133 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 UBE2WQ96B02 151 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 PRADC1Q9BSG0 188 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 BPESC1Q9GZL8 116 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 AGPAT4-IT1Q9H0P7 198 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 SPANXB1Q9NS25 103 aaPredicted RBP1.54□□□□□ -2.16
FOCAD-208ENST00000603648 MRPL35Q9NZE8 188 aaKnown RBP1.54□□□□□ -2.16
FOCAD-208ENST00000603648 PRO1854Q9UHT4 67 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 ERG28Q9UKR5 140 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 ARFGEF3Q5TH69 2177 aa1.54□□□□□ -2.16
FOCAD-208ENST00000603648 TGP01266 2768 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 TRAV2A0A0B4J234 112 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 B4DSR2 109 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 LYNX1G3V0Z9 82 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 H3BVH4 76 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 I3L3M4 83 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 J3QQQ9 107 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 LEPROTO15243 131 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 TIMM17BO60830 172 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 ATP5G1P05496 136 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 LGALS1P09382 135 aaKnown RBP1.53□□□□□ -2.16
FOCAD-208ENST00000603648 P0DMU3 169 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 FAM231AP0DMU4 169 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 FAM231CP0DMU5 169 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 LYNX1P0DP58 116 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 CD24P25063 80 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 TMEM170BQ5T4T1 132 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 TEN1Q86WV5 123 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 C10orf126Q8N4M7 172 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 C5orf56Q8N8D9 126 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 ZNF418Q8TF45 676 aaPredicted RBP1.53□□□□□ -2.16
FOCAD-208ENST00000603648 PTH2Q96A98 100 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 DNAJC30Q96LL9 226 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 RHPN1-AS1Q9BWJ2 59 aa1.53□□□□□ -2.16
FOCAD-208ENST00000603648 PRKDCP78527 4128 aaKnown RBP1.52□□□□□ -2.17
FOCAD-208ENST00000603648 TRBV7-3A0A075B6L6 115 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 TRAV8-2A0A0B4J237 113 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 CLPSL1A2RUU4 121 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 IGIPA6NJ69 53 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 H3BT86 120 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 MSMBP08118 114 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 CD7P09564 240 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 SPINK8P0C7L1 97 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 ZNF80P51504 273 aaPredicted RBP1.52□□□□□ -2.17
FOCAD-208ENST00000603648 UBE2D1P51668 147 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 FXYD2P54710 66 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 CKS1BP61024 79 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 ZNF56Q15929 161 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 ETDBQ3ZM63 59 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 NDUFA11Q86Y39 141 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 CARD19Q96LW7 228 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 ANAPC13Q9BS18 74 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 TIMM21Q9BVV7 248 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 GTSF1LQ9H1H1 148 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 RBM12B-AS1Q9P1G2 102 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 TP53TG1Q9Y2A0 90 aa1.52□□□□□ -2.17
FOCAD-208ENST00000603648 HEATR1Q9H583 2144 aaKnown RBP1.52□□□□□ -2.17
FOCAD-208ENST00000603648 PKD1L1Q8TDX9 2849 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 ARHGAP32A7KAX9 2087 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TRRAPQ9Y4A5 3859 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 NOTCH1P46531 2555 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 IGKV2D-26A0A0A0MRZ7 120 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TRAV26-2A0A0B4J265 109 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TRAV4A0A0B4J268 109 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 A0A0J9YY99 117 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TRBV10-1A0A0K0K1A3 114 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TRBV30A0A0K0K1B3 111 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TRBV10-2A0A0K0K1G8 114 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TINCRA0A1B0GVN0 87 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 G3V318 75 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 H3BUX3 64 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 K7ERJ3 54 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 M0QY20 66 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 SLC25A20O43772 301 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 IGHV3-30P01768 117 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 IGHV3-30-5P0DP03 117 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 POLR2KP53803 58 aaKnown RBP1.51□□□□□ -2.17
FOCAD-208ENST00000603648 UBE2D3P61077 147 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 UBE2D2P62837 147 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 HERVK_113P63121 156 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 MRPS36P82909 103 aaKnown RBP1.51□□□□□ -2.17
FOCAD-208ENST00000603648 WFDC2Q14508 124 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 MIAQ16674 131 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 KRTAP13-4Q3LI77 160 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 FAM74A4Q5TZK3 123 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 CFAP126Q5VTH2 177 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 Q6Q795 121 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 ANKRD29Q8N6D5 301 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 ZFAND2AQ8N6M9 145 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 LINC01600Q96MT4 127 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 LINC00467Q9BRT7 94 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 IMUPQ9GZP8 106 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TMEM126AQ9H061 195 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 V9GYY9 64 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 SORL1Q92673 2214 aa1.51□□□□□ -2.17
FOCAD-208ENST00000603648 TANC2Q9HCD6 1990 aa1.5□□□□□ -2.17
FOCAD-208ENST00000603648 TRAV13-2A0A0B4J235 113 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms