RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 PRO0461Q9UI25 63 aa3.41□□□□□ -1.86
VRK3-226ENST00000602029 UBE2D4Q9Y2X8 147 aa3.41□□□□□ -1.86
VRK3-226ENST00000602029 K7ERJ3 54 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 NDUFA1O15239 70 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 APOMO95445 188 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 ANGP03950 147 aaKnown RBP3.4□□□□□ -1.87
VRK3-226ENST00000602029 FOXI1Q12951 378 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 MIAQ16674 131 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 RNF151Q2KHN1 245 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 CLPSL2Q6UWE3 100 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 Q6ZSA8 131 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 MTURNQ8N3F0 131 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 PPDPFLQ8WWR9 84 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 CHCHD7Q9BUK0 85 aa3.4□□□□□ -1.87
VRK3-226ENST00000602029 GEMIN7Q9H840 131 aaKnown RBP3.4□□□□□ -1.87
VRK3-226ENST00000602029 IGLV5-39A0A0G2JS06 123 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 CFC1BP0CG36 223 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 CFC1P0CG37 223 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 TSPEAR-AS2P59090 65 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 ATXN8Q156A1 80 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 DGAT2L7PQ6IED9 249 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 SIGMAR1Q99720 223 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 NDUFA12Q9UI09 145 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 ERG28Q9UKR5 140 aa3.39□□□□□ -1.87
VRK3-226ENST00000602029 LOC107984156A0A0G2JMH3 177 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 A0A0J9YXV3 536 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 A4D1N5 150 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 GAGE12HA6NDE8 117 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 USP17L23D6RBM5 183 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 H3BT86 120 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 RPL13AP40429 203 aaKnown RBP3.38□□□□□ -1.87
VRK3-226ENST00000602029 ARL17AQ8IVW1 177 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 TMEM101Q96IK0 257 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 CARD19Q96LW7 228 aa3.38□□□□□ -1.87
VRK3-226ENST00000602029 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 FAM240AA0A1B0GVK7 77 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 SCGB1C2P0DMR2 95 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 GAGE6Q13070 117 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 ETDBQ3ZM63 59 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 LINC01561Q8N1V8 128 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 C7orf33Q8WU49 177 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 FAM104AQ969W3 186 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 LITAFQ99732 161 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 NAA38Q9BRA0 125 aaKnown RBP3.37□□□□□ -1.87
VRK3-226ENST00000602029 Q9UF83 564 aa3.37□□□□□ -1.87
VRK3-226ENST00000602029 TRBV10-2A0A0K0K1G8 114 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 A0A1B0GV72 72 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 UBE2L6O14933 153 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 SLC25A20O43772 301 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 TCL1BO95988 128 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 PSMB2P49721 201 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 Q6ZUT4 128 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 MUSTN1Q8IVN3 82 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 LINC00269Q8N2A0 174 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 TMEM243Q9BU79 118 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 CDC42SE2Q9NRR3 84 aa3.36□□□□□ -1.87
VRK3-226ENST00000602029 LPAP08519 4548 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 IGHV3-64A0A075B6Q5 118 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 TRBV6-8A0A0A6YYG3 113 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 SMIM1B2RUZ4 78 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 LST1O00453 97 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 ACYP1P07311 99 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 LINC00694P0DN24 101 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 Q1RN00 199 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 LINC00242Q5T6M2 205 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 ANKRD29Q8N6D5 301 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 CDKN2A-AS1Q9UH64 79 aa3.35□□□□□ -1.87
VRK3-226ENST00000602029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.35□□□□□ -1.87
VRK3-226ENST00000602029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.34□□□□□ -1.87
VRK3-226ENST00000602029 TRAV13-2A0A0B4J235 113 aa3.34□□□□□ -1.87
VRK3-226ENST00000602029 IGKV2-24A0A0C4DH68 120 aa3.34□□□□□ -1.87
VRK3-226ENST00000602029 A0A1B0GUV1 79 aa3.34□□□□□ -1.87
VRK3-226ENST00000602029 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.87
VRK3-226ENST00000602029 TRACP01848 142 aa3.34□□□□□ -1.87
VRK3-226ENST00000602029 CHTF8P0CG12 524 aa3.34□□□□□ -1.87
VRK3-226ENST00000602029 Q6Q795 121 aa3.34□□□□□ -1.87
VRK3-226ENST00000602029 ENHOQ6UWT2 76 aa3.34□□□□□ -1.87
VRK3-226ENST00000602029 Q6ZRU5 148 aa3.34□□□□□ -1.87
VRK3-226ENST00000602029 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
VRK3-226ENST00000602029 OPRPNQ99935 248 aaPredicted RBP3.34□□□□□ -1.87
VRK3-226ENST00000602029 C9JAW5 83 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 COX7A2LO14548 114 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 TRIAP1O43715 76 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 PRSS2P07478 247 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 SPINK8P0C7L1 97 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 KRTAP10-4P60372 401 aaPredicted RBP3.33□□□□□ -1.88
VRK3-226ENST00000602029 REG3AQ06141 175 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 MEIG1Q5JSS6 88 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 LINC00308Q8TCZ7 52 aa3.33□□□□□ -1.88
VRK3-226ENST00000602029 A0A087WYN8 130 aa3.32□□□□□ -1.88
VRK3-226ENST00000602029 A0A087WZ39 114 aa3.32□□□□□ -1.88
VRK3-226ENST00000602029 A0A1B0GX51 115 aa3.32□□□□□ -1.88
VRK3-226ENST00000602029 PANO1I0J062 215 aa3.32□□□□□ -1.88
VRK3-226ENST00000602029 CXCL5P42830 114 aa3.32□□□□□ -1.88
VRK3-226ENST00000602029 COX17Q14061 63 aa3.32□□□□□ -1.88
VRK3-226ENST00000602029 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms