RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
SOX2-OT-228ENST00000597828 SYS1-DBNDD2H3BUS1 97 aa7.2□□□□□ -1.26
SOX2-OT-228ENST00000597828 AKR1D1P51857 326 aa7.2□□□□□ -1.26
SOX2-OT-228ENST00000597828 HERVK_113P61574 105 aa7.2□□□□□ -1.26
SOX2-OT-228ENST00000597828 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
SOX2-OT-228ENST00000597828 IGLV5-45A0A087WSX0 123 aa7.19□□□□□ -1.26
SOX2-OT-228ENST00000597828 C11orf86A6NJI1 115 aa7.19□□□□□ -1.26
SOX2-OT-228ENST00000597828 IGKCP01834 107 aa7.19□□□□□ -1.26
SOX2-OT-228ENST00000597828 SPINK8P0C7L1 97 aa7.19□□□□□ -1.26
SOX2-OT-228ENST00000597828 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
SOX2-OT-228ENST00000597828 HIST3H2BBQ8N257 126 aa7.19□□□□□ -1.26
SOX2-OT-228ENST00000597828 C22orf24Q9Y442 160 aa7.19□□□□□ -1.26
SOX2-OT-228ENST00000597828 ZNF861PO60384 105 aa7.18□□□□□ -1.26
SOX2-OT-228ENST00000597828 C3orf79P0CE67 100 aa7.18□□□□□ -1.26
SOX2-OT-228ENST00000597828 ZNF22P17026 224 aaPredicted RBP7.18□□□□□ -1.26
SOX2-OT-228ENST00000597828 Q8IZM0 81 aa7.18□□□□□ -1.26
SOX2-OT-228ENST00000597828 COX7B2Q8TF08 81 aa7.18□□□□□ -1.26
SOX2-OT-228ENST00000597828 TMA7Q9Y2S6 64 aaKnown RBP7.18□□□□□ -1.26
SOX2-OT-228ENST00000597828 A0A087X002 238 aa7.17□□□□□ -1.26
SOX2-OT-228ENST00000597828 C5orf52A6NGY3 159 aa7.17□□□□□ -1.26
SOX2-OT-228ENST00000597828 RPL13AP40429 203 aaKnown RBP7.17□□□□□ -1.26
SOX2-OT-228ENST00000597828 CXCL5P42830 114 aa7.17□□□□□ -1.26
SOX2-OT-228ENST00000597828 PMCHL2Q9BQD1 86 aa7.17□□□□□ -1.26
SOX2-OT-228ENST00000597828 MUC2Q02817 5179 aa7.16□□□□□ -1.26
SOX2-OT-228ENST00000597828 TSPAN13O95857 204 aa7.16□□□□□ -1.26
SOX2-OT-228ENST00000597828 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
SOX2-OT-228ENST00000597828 SMIM1B2RUZ4 78 aa7.15□□□□□ -1.26
SOX2-OT-228ENST00000597828 SFTA2Q6UW10 78 aa7.15□□□□□ -1.26
SOX2-OT-228ENST00000597828 TMEM223A0PJW6 202 aa7.14□□□□□ -1.27
SOX2-OT-228ENST00000597828 SCGB1D1O95968 90 aa7.14□□□□□ -1.27
SOX2-OT-228ENST00000597828 LINC01545Q5VT33 79 aa7.14□□□□□ -1.27
SOX2-OT-228ENST00000597828 MRPL55Q7Z7F7 128 aaKnown RBP7.14□□□□□ -1.27
SOX2-OT-228ENST00000597828 PLEKHB2Q96CS7 222 aa7.14□□□□□ -1.27
SOX2-OT-228ENST00000597828 RPL37AP8A6NKH3 93 aa7.13□□□□□ -1.27
SOX2-OT-228ENST00000597828 HSBP1L1C9JCN9 74 aa7.13□□□□□ -1.27
SOX2-OT-228ENST00000597828 GAGE10A6NGK3 116 aa7.12□□□□□ -1.27
SOX2-OT-228ENST00000597828 LEPROTO15243 131 aa7.12□□□□□ -1.27
SOX2-OT-228ENST00000597828 BCE1O60756 84 aa7.12□□□□□ -1.27
SOX2-OT-228ENST00000597828 LGALS3P17931 250 aaKnown RBP7.12□□□□□ -1.27
SOX2-OT-228ENST00000597828 LBHQ53QV2 105 aaPredicted RBP7.12□□□□□ -1.27
SOX2-OT-228ENST00000597828 LINC00167Q96N53 147 aa7.12□□□□□ -1.27
SOX2-OT-228ENST00000597828 ANAPC11Q9NYG5 84 aa7.12□□□□□ -1.27
SOX2-OT-228ENST00000597828 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
SOX2-OT-228ENST00000597828 MYMXA0A1B0GTQ4 84 aa7.11□□□□□ -1.27
SOX2-OT-228ENST00000597828 LINC00587B1AMM8 73 aa7.11□□□□□ -1.27
SOX2-OT-228ENST00000597828 TP73-AS1Q9UF72 201 aa7.11□□□□□ -1.27
SOX2-OT-228ENST00000597828 RPL28P46779 137 aaKnown RBP7.1□□□□□ -1.27
SOX2-OT-228ENST00000597828 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
SOX2-OT-228ENST00000597828 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
SOX2-OT-228ENST00000597828 J3QQQ9 107 aa7.09□□□□□ -1.27
SOX2-OT-228ENST00000597828 HERV-K104P63124 156 aa7.09□□□□□ -1.27
SOX2-OT-228ENST00000597828 KRTAP13-2Q52LG2 175 aa7.09□□□□□ -1.27
SOX2-OT-228ENST00000597828 RETNLBQ9BQ08 111 aa7.09□□□□□ -1.27
SOX2-OT-228ENST00000597828 MUC17Q685J3 4493 aa7.09□□□□□ -1.28
SOX2-OT-228ENST00000597828 E9PLD3 99 aa7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 CRYGAP11844 174 aa7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 NMUP48645 174 aa7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 MEIG1Q5JSS6 88 aa7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 NDUFA12Q9UI09 145 aa7.08□□□□□ -1.28
SOX2-OT-228ENST00000597828 PFN2P35080 140 aa7.07□□□□□ -1.28
SOX2-OT-228ENST00000597828 LINC00158P58513 81 aa7.07□□□□□ -1.28
SOX2-OT-228ENST00000597828 COX17Q14061 63 aa7.07□□□□□ -1.28
SOX2-OT-228ENST00000597828 IGLV5-37A0A075B6J1 123 aa7.06□□□□□ -1.28
SOX2-OT-228ENST00000597828 IGKV2-28A0A075B6P5 120 aa7.06□□□□□ -1.28
SOX2-OT-228ENST00000597828 IGKV2D-28P01615 120 aa7.06□□□□□ -1.28
SOX2-OT-228ENST00000597828 UBE2AP49459 152 aa7.05□□□□□ -1.28
SOX2-OT-228ENST00000597828 PRLHP81277 87 aa7.05□□□□□ -1.28
SOX2-OT-228ENST00000597828 NKAPP1Q8N9T2 125 aa7.05□□□□□ -1.28
SOX2-OT-228ENST00000597828 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
SOX2-OT-228ENST00000597828 A0A0U1RRA0 63 aa7.03□□□□□ -1.28
SOX2-OT-228ENST00000597828 ZNF815PA8K554 130 aa7.03□□□□□ -1.28
SOX2-OT-228ENST00000597828 JOSD1Q15040 202 aaPredicted RBP7.03□□□□□ -1.28
SOX2-OT-228ENST00000597828 FAT4Q6V0I7 4981 aa7.02□□□□□ -1.29
SOX2-OT-228ENST00000597828 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
SOX2-OT-228ENST00000597828 SCGB1D4Q6XE38 83 aa7.02□□□□□ -1.29
SOX2-OT-228ENST00000597828 LINC00304Q8N9R0 145 aa7.02□□□□□ -1.29
SOX2-OT-228ENST00000597828 Q8NDZ9 215 aa7.02□□□□□ -1.29
SOX2-OT-228ENST00000597828 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
SOX2-OT-228ENST00000597828 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
SOX2-OT-228ENST00000597828 SMIM13P0DJ93 91 aa7.01□□□□□ -1.29
SOX2-OT-228ENST00000597828 VPREB1P12018 145 aa7.01□□□□□ -1.29
SOX2-OT-228ENST00000597828 MIEN1Q9BRT3 115 aa7.01□□□□□ -1.29
SOX2-OT-228ENST00000597828 VAMP8Q9BV40 100 aa7.01□□□□□ -1.29
SOX2-OT-228ENST00000597828 TSPEAR-AS2P59090 65 aa7□□□□□ -1.29
SOX2-OT-228ENST00000597828 RPL24P83731 157 aaKnown RBP7□□□□□ -1.29
SOX2-OT-228ENST00000597828 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
SOX2-OT-228ENST00000597828 ANKRD39Q53RE8 183 aa7□□□□□ -1.29
SOX2-OT-228ENST00000597828 FAM19A1Q7Z5A9 133 aa7□□□□□ -1.29
SOX2-OT-228ENST00000597828 SND1-IT1Q9HBX3 110 aa7□□□□□ -1.29
SOX2-OT-228ENST00000597828 S100A12P80511 92 aa6.99□□□□□ -1.29
SOX2-OT-228ENST00000597828 C3orf22Q8N5N4 141 aa6.99□□□□□ -1.29
SOX2-OT-228ENST00000597828 TMEM126AQ9H061 195 aa6.99□□□□□ -1.29
SOX2-OT-228ENST00000597828 IGKV2D-26A0A0A0MRZ7 120 aa6.98□□□□□ -1.29
SOX2-OT-228ENST00000597828 A0A0J9YXY3 114 aa6.98□□□□□ -1.29
SOX2-OT-228ENST00000597828 M0R378 163 aa6.98□□□□□ -1.29
SOX2-OT-228ENST00000597828 MIR7-3HGQ8N6C7 128 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms