RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 APOMO95445 188 aa8.43□□□□□ -1.06
SCAF1-202ENST00000595242 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
SCAF1-202ENST00000595242 Q6ZSA8 131 aa8.43□□□□□ -1.06
SCAF1-202ENST00000595242 Q8IZM0 81 aa8.43□□□□□ -1.06
SCAF1-202ENST00000595242 LINC00269Q8N2A0 174 aa8.43□□□□□ -1.06
SCAF1-202ENST00000595242 Q8N814 137 aa8.43□□□□□ -1.06
SCAF1-202ENST00000595242 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
SCAF1-202ENST00000595242 IGHV3-33P01772 117 aa8.42□□□□□ -1.06
SCAF1-202ENST00000595242 C5orf38Q86SI9 138 aa8.42□□□□□ -1.06
SCAF1-202ENST00000595242 Q8N3U1 123 aa8.42□□□□□ -1.06
SCAF1-202ENST00000595242 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
SCAF1-202ENST00000595242 CHCHD10Q8WYQ3 142 aaPredicted RBP8.42□□□□□ -1.06
SCAF1-202ENST00000595242 TNXBP22105 4242 aa8.41□□□□□ -1.06
SCAF1-202ENST00000595242 XCL1P47992 114 aa8.41□□□□□ -1.06
SCAF1-202ENST00000595242 LYRM7Q5U5X0 104 aa8.41□□□□□ -1.06
SCAF1-202ENST00000595242 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
SCAF1-202ENST00000595242 FOXI1Q12951 378 aa8.4□□□□□ -1.06
SCAF1-202ENST00000595242 MEIG1Q5JSS6 88 aa8.4□□□□□ -1.06
SCAF1-202ENST00000595242 CLPSL2Q6UWE3 100 aa8.4□□□□□ -1.06
SCAF1-202ENST00000595242 WFDC10BQ8IUB3 73 aa8.4□□□□□ -1.06
SCAF1-202ENST00000595242 COX7A2LO14548 114 aa8.39□□□□□ -1.07
SCAF1-202ENST00000595242 PRSS2P07478 247 aa8.39□□□□□ -1.07
SCAF1-202ENST00000595242 CXCL5P42830 114 aa8.39□□□□□ -1.07
SCAF1-202ENST00000595242 KIAA0087Q14695 138 aa8.39□□□□□ -1.07
SCAF1-202ENST00000595242 TOMM7Q9P0U1 55 aa8.39□□□□□ -1.07
SCAF1-202ENST00000595242 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
SCAF1-202ENST00000595242 ENHOQ6UWT2 76 aa8.38□□□□□ -1.07
SCAF1-202ENST00000595242 SOSTDC1Q6X4U4 206 aa8.38□□□□□ -1.07
SCAF1-202ENST00000595242 SCXQ7RTU7 201 aa8.38□□□□□ -1.07
SCAF1-202ENST00000595242 DAND5Q8N907 189 aa8.37□□□□□ -1.07
SCAF1-202ENST00000595242 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
SCAF1-202ENST00000595242 ERG28Q9UKR5 140 aa8.37□□□□□ -1.07
SCAF1-202ENST00000595242 TRBV20-1A0A075B6N2 111 aa8.36□□□□□ -1.07
SCAF1-202ENST00000595242 TRBV30A0A0K0K1B3 111 aa8.36□□□□□ -1.07
SCAF1-202ENST00000595242 LINC01556Q5JQF7 62 aa8.36□□□□□ -1.07
SCAF1-202ENST00000595242 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
SCAF1-202ENST00000595242 NPC2P61916 151 aa8.35□□□□□ -1.07
SCAF1-202ENST00000595242 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
SCAF1-202ENST00000595242 IGLV10-54A0A075B6I4 117 aa8.34□□□□□ -1.07
SCAF1-202ENST00000595242 LOC107984156A0A0G2JMH3 177 aa8.34□□□□□ -1.07
SCAF1-202ENST00000595242 CRPP02741 224 aa8.34□□□□□ -1.07
SCAF1-202ENST00000595242 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
SCAF1-202ENST00000595242 KRTAP26-1Q6PEX3 210 aa8.34□□□□□ -1.07
SCAF1-202ENST00000595242 ARL17AQ8IVW1 177 aa8.34□□□□□ -1.07
SCAF1-202ENST00000595242 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
SCAF1-202ENST00000595242 F8W1H4 67 aa8.33□□□□□ -1.08
SCAF1-202ENST00000595242 MALP21145 153 aa8.33□□□□□ -1.08
SCAF1-202ENST00000595242 COX17Q14061 63 aa8.33□□□□□ -1.08
SCAF1-202ENST00000595242 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
SCAF1-202ENST00000595242 PRO0461Q9UI25 63 aa8.33□□□□□ -1.08
SCAF1-202ENST00000595242 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
SCAF1-202ENST00000595242 UBE2WQ96B02 151 aa8.32□□□□□ -1.08
SCAF1-202ENST00000595242 Q9HAA7 133 aa8.32□□□□□ -1.08
SCAF1-202ENST00000595242 H3BMG7 143 aa8.31□□□□□ -1.08
SCAF1-202ENST00000595242 TCL1BO95988 128 aa8.31□□□□□ -1.08
SCAF1-202ENST00000595242 RPL13AP40429 203 aaKnown RBP8.31□□□□□ -1.08
SCAF1-202ENST00000595242 LINC00158P58513 81 aa8.31□□□□□ -1.08
SCAF1-202ENST00000595242 CKS1BP61024 79 aa8.31□□□□□ -1.08
SCAF1-202ENST00000595242 LINC01620Q4KN68 170 aa8.31□□□□□ -1.08
SCAF1-202ENST00000595242 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
SCAF1-202ENST00000595242 TRIAP1O43715 76 aa8.3□□□□□ -1.08
SCAF1-202ENST00000595242 SPAG11BQ08648 103 aa8.3□□□□□ -1.08
SCAF1-202ENST00000595242 WFDC2Q14508 124 aa8.3□□□□□ -1.08
SCAF1-202ENST00000595242 Q1RN00 199 aa8.3□□□□□ -1.08
SCAF1-202ENST00000595242 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
SCAF1-202ENST00000595242 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
SCAF1-202ENST00000595242 KRTAP9-2Q9BYQ4 174 aa8.3□□□□□ -1.08
SCAF1-202ENST00000595242 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.29□□□□□ -1.08
SCAF1-202ENST00000595242 PSMB2P49721 201 aa8.29□□□□□ -1.08
SCAF1-202ENST00000595242 LINC01600Q96MT4 127 aa8.29□□□□□ -1.08
SCAF1-202ENST00000595242 SND1-IT1Q9HBX3 110 aa8.29□□□□□ -1.08
SCAF1-202ENST00000595242 TRAV13-2A0A0B4J235 113 aa8.28□□□□□ -1.08
SCAF1-202ENST00000595242 M0QXV9 152 aa8.28□□□□□ -1.08
SCAF1-202ENST00000595242 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
SCAF1-202ENST00000595242 H7C2G1 150 aa8.27□□□□□ -1.09
SCAF1-202ENST00000595242 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
SCAF1-202ENST00000595242 COX6CP09669 75 aa8.27□□□□□ -1.09
SCAF1-202ENST00000595242 SCGB1C2P0DMR2 95 aa8.27□□□□□ -1.09
SCAF1-202ENST00000595242 PFN2P35080 140 aa8.27□□□□□ -1.09
SCAF1-202ENST00000595242 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
SCAF1-202ENST00000595242 F8WDY8 70 aa8.26□□□□□ -1.09
SCAF1-202ENST00000595242 LECT2O14960 151 aa8.26□□□□□ -1.09
SCAF1-202ENST00000595242 NDUFC2O95298 119 aa8.26□□□□□ -1.09
SCAF1-202ENST00000595242 ATXN8Q156A1 80 aa8.26□□□□□ -1.09
SCAF1-202ENST00000595242 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
SCAF1-202ENST00000595242 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
SCAF1-202ENST00000595242 LINC00337Q8N6G1 96 aa8.25□□□□□ -1.09
SCAF1-202ENST00000595242 C2orf48Q96LS8 159 aa8.25□□□□□ -1.09
SCAF1-202ENST00000595242 C1orf43Q9BWL3 253 aa8.25□□□□□ -1.09
SCAF1-202ENST00000595242 LST1O00453 97 aa8.24□□□□□ -1.09
SCAF1-202ENST00000595242 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
SCAF1-202ENST00000595242 C15orf56Q8N910 161 aa8.24□□□□□ -1.09
SCAF1-202ENST00000595242 K7ERU9 68 aa8.23□□□□□ -1.09
SCAF1-202ENST00000595242 C10orf25Q5T742 122 aa8.23□□□□□ -1.09
SCAF1-202ENST00000595242 UNQ6190/PRO20217Q6UXQ8 127 aa8.23□□□□□ -1.09
SCAF1-202ENST00000595242 KRTAP9-6A0A140TA67 174 aa8.21□□□□□ -1.1
SCAF1-202ENST00000595242 Q6ZRU5 148 aa8.21□□□□□ -1.1
SCAF1-202ENST00000595242 C6orf48Q9UBA6 75 aa8.21□□□□□ -1.1
SCAF1-202ENST00000595242 TRBV10-2A0A0K0K1G8 114 aa8.2□□□□□ -1.1
SCAF1-202ENST00000595242 SLC25A20O43772 301 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms