RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 COX6A2Q02221 97 aa10.67□□□□□ -0.7
PNKP-204ENST00000594661 SS18Q15532 418 aa10.67□□□□□ -0.7
PNKP-204ENST00000594661 FAM19A3Q7Z5A8 133 aa10.67□□□□□ -0.7
PNKP-204ENST00000594661 BRK1Q8WUW1 75 aa10.67□□□□□ -0.7
PNKP-204ENST00000594661 ENHOQ6UWT2 76 aa10.66□□□□□ -0.7
PNKP-204ENST00000594661 SMIM11BQ8TCY0 68 aa10.66□□□□□ -0.7
PNKP-204ENST00000594661 PKD1L1Q8TDX9 2849 aa10.66□□□□□ -0.7
PNKP-204ENST00000594661 SMIM1B2RUZ4 78 aa10.66□□□□□ -0.7
PNKP-204ENST00000594661 MAST4O15021 2626 aa10.65□□□□□ -0.7
PNKP-204ENST00000594661 IGKV2-28A0A075B6P5 120 aa10.65□□□□□ -0.7
PNKP-204ENST00000594661 UBE2L6O14933 153 aa10.65□□□□□ -0.7
PNKP-204ENST00000594661 DEFB4AO15263 64 aa10.65□□□□□ -0.7
PNKP-204ENST00000594661 IGKV2D-28P01615 120 aa10.65□□□□□ -0.7
PNKP-204ENST00000594661 ATP5EP56381 51 aaPredicted RBP10.65□□□□□ -0.7
PNKP-204ENST00000594661 TRBV7-6A0A0J9YX20 115 aa10.64□□□□□ -0.71
PNKP-204ENST00000594661 A0A0U1RQV1 116 aa10.64□□□□□ -0.71
PNKP-204ENST00000594661 MIR7-3HGQ8N6C7 128 aa10.64□□□□□ -0.71
PNKP-204ENST00000594661 ANK2Q01484 3957 aa10.64□□□□□ -0.71
PNKP-204ENST00000594661 IGHV4-28A0A0C4DH34 117 aa10.63□□□□□ -0.71
PNKP-204ENST00000594661 LECT2O14960 151 aa10.63□□□□□ -0.71
PNKP-204ENST00000594661 LINC00242Q5T6M2 205 aa10.63□□□□□ -0.71
PNKP-204ENST00000594661 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
PNKP-204ENST00000594661 LINC00474Q9P2X8 69 aa10.63□□□□□ -0.71
PNKP-204ENST00000594661 ORMDL1Q9P0S3 153 aa10.63□□□□□ -0.71
PNKP-204ENST00000594661 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
PNKP-204ENST00000594661 NDUFC1O43677 76 aa10.62□□□□□ -0.71
PNKP-204ENST00000594661 F8WEM9 126 aa10.61□□□□□ -0.71
PNKP-204ENST00000594661 JMJD7-PLA2G4BH0Y9G9 81 aa10.61□□□□□ -0.71
PNKP-204ENST00000594661 Q8NAQ8 132 aa10.61□□□□□ -0.71
PNKP-204ENST00000594661 LYRM9A8MSI8 78 aa10.61□□□□□ -0.71
PNKP-204ENST00000594661 EGFEM1PQ0D2K5 195 aa10.61□□□□□ -0.71
PNKP-204ENST00000594661 LINC00167Q96N53 147 aa10.6□□□□□ -0.71
PNKP-204ENST00000594661 RMI2Q96E14 147 aa10.6□□□□□ -0.71
PNKP-204ENST00000594661 SND1-IT1Q9HBX3 110 aa10.6□□□□□ -0.71
PNKP-204ENST00000594661 COL6A5A8TX70 2615 aa10.59□□□□□ -0.71
PNKP-204ENST00000594661 RBM3P98179 157 aaKnown RBP10.59□□□□□ -0.71
PNKP-204ENST00000594661 UBL5Q9BZL1 73 aa10.59□□□□□ -0.71
PNKP-204ENST00000594661 CELA1Q9UNI1 258 aa10.59□□□□□ -0.71
PNKP-204ENST00000594661 MIFP14174 115 aa10.58□□□□□ -0.72
PNKP-204ENST00000594661 TRBV6-8A0A0A6YYG3 113 aa10.58□□□□□ -0.72
PNKP-204ENST00000594661 SNURFQ9Y675 71 aa10.57□□□□□ -0.72
PNKP-204ENST00000594661 SLPIP03973 132 aa10.57□□□□□ -0.72
PNKP-204ENST00000594661 GYPEP15421 78 aa10.57□□□□□ -0.72
PNKP-204ENST00000594661 DAD1P61803 113 aa10.55□□□□□ -0.72
PNKP-204ENST00000594661 PRO0255Q9UI72 69 aa10.55□□□□□ -0.72
PNKP-204ENST00000594661 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
PNKP-204ENST00000594661 RETNQ9HD89 108 aa10.54□□□□□ -0.72
PNKP-204ENST00000594661 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
PNKP-204ENST00000594661 IBA57-AS1B1ANH7 110 aa10.53□□□□□ -0.72
PNKP-204ENST00000594661 TRAV10A0A0B4J240 114 aa10.52□□□□□ -0.73
PNKP-204ENST00000594661 PAX4O43316 350 aa10.52□□□□□ -0.73
PNKP-204ENST00000594661 SPART-AS1P0CW21 52 aa10.52□□□□□ -0.73
PNKP-204ENST00000594661 A0A096LPF7 62 aa10.51□□□□□ -0.73
PNKP-204ENST00000594661 CCL18P55774 89 aa10.51□□□□□ -0.73
PNKP-204ENST00000594661 TRBV7-4A0A0J9YYF1 115 aa10.5□□□□□ -0.73
PNKP-204ENST00000594661 TMEM256-PLSCR3K7ERE1 68 aa10.5□□□□□ -0.73
PNKP-204ENST00000594661 C6orf226Q5I0X4 101 aa10.49□□□□□ -0.73
PNKP-204ENST00000594661 FAM229BQ4G0N7 80 aa10.49□□□□□ -0.73
PNKP-204ENST00000594661 HTN3P15516 51 aa10.48□□□□□ -0.73
PNKP-204ENST00000594661 PRR15Q8IV56 129 aa10.48□□□□□ -0.73
PNKP-204ENST00000594661 LINC01547P58512 204 aaPredicted RBP10.48□□□□□ -0.73
PNKP-204ENST00000594661 PMAIP1Q13794 54 aa10.47□□□□□ -0.73
PNKP-204ENST00000594661 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
PNKP-204ENST00000594661 Q8N814 137 aa10.46□□□□□ -0.73
PNKP-204ENST00000594661 COX7B2Q8TF08 81 aa10.46□□□□□ -0.73
PNKP-204ENST00000594661 IGHV3OR16-9A0A0B4J2B5 98 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 PRB2P02812 416 aaPredicted RBP10.45□□□□□ -0.74
PNKP-204ENST00000594661 CXCL6P80162 114 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 Q6ZRU5 148 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 TOMM7Q9P0U1 55 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 LINC00959A0A1B0GUT2 108 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 ERC2-IT1O76042 136 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 LINC00158P58513 81 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 Q6ZQT0 140 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 MPLKIPQ8TAP9 179 aa10.45□□□□□ -0.74
PNKP-204ENST00000594661 LOC110117498A0A087WWA1 95 aa10.44□□□□□ -0.74
PNKP-204ENST00000594661 LAMTOR3Q9UHA4 124 aa10.44□□□□□ -0.74
PNKP-204ENST00000594661 TENM3Q9P273 2699 aa10.44□□□□□ -0.74
PNKP-204ENST00000594661 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
PNKP-204ENST00000594661 TM2D3Q9BRN9 247 aa10.43□□□□□ -0.74
PNKP-204ENST00000594661 NBEAL1Q6ZS30 2694 aa10.43□□□□□ -0.74
PNKP-204ENST00000594661 A0A087WZ39 114 aa10.42□□□□□ -0.74
PNKP-204ENST00000594661 ESRGQ1W209 222 aa10.42□□□□□ -0.74
PNKP-204ENST00000594661 CLPSL2Q6UWE3 100 aa10.42□□□□□ -0.74
PNKP-204ENST00000594661 Q6ZVQ6 151 aa10.42□□□□□ -0.74
PNKP-204ENST00000594661 C11orf68Q9H3H3 251 aaKnown RBP10.41□□□□□ -0.74
PNKP-204ENST00000594661 Q8N3U1 123 aa10.4□□□□□ -0.74
PNKP-204ENST00000594661 MDFIQ99750 246 aa10.4□□□□□ -0.74
PNKP-204ENST00000594661 TMEM254Q8TBM7 123 aa10.4□□□□□ -0.74
PNKP-204ENST00000594661 A0A0J9YWU9 116 aa10.39□□□□□ -0.75
PNKP-204ENST00000594661 Q6ZTC4 211 aa10.39□□□□□ -0.75
PNKP-204ENST00000594661 HAMPP81172 84 aa10.39□□□□□ -0.75
PNKP-204ENST00000594661 K7EIL1 84 aa10.38□□□□□ -0.75
PNKP-204ENST00000594661 NANOS2P60321 138 aaKnown RBP10.38□□□□□ -0.75
PNKP-204ENST00000594661 NREPQ16612 68 aa10.38□□□□□ -0.75
PNKP-204ENST00000594661 LINC00269Q8N2A0 174 aa10.37□□□□□ -0.75
PNKP-204ENST00000594661 C6orf223Q8N319 242 aa10.36□□□□□ -0.75
PNKP-204ENST00000594661 ANGP03950 147 aaKnown RBP10.36□□□□□ -0.75
PNKP-204ENST00000594661 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
PNKP-204ENST00000594661 HUWE1Q7Z6Z7 4374 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 241.3 ms