RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PPDPFLQ8WWR9 84 aa8.83□□□□□ -1
VRK3-205ENST00000593919 IGKV2D-24A0A075B6R9 120 aa8.82□□□□□ -1
VRK3-205ENST00000593919 VPS13DQ5THJ4 4388 aa8.82□□□□□ -1
VRK3-205ENST00000593919 KMT2AQ03164 3969 aa8.82□□□□□ -1
VRK3-205ENST00000593919 KRTAP1-5Q9BYS1 174 aa8.82□□□□□ -1
VRK3-205ENST00000593919 SND1-IT1Q9HBX3 110 aa8.82□□□□□ -1
VRK3-205ENST00000593919 Q8IZM0 81 aa8.81□□□□□ -1
VRK3-205ENST00000593919 PPDPFQ9H3Y8 114 aa8.81□□□□□ -1
VRK3-205ENST00000593919 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
VRK3-205ENST00000593919 LST1O00453 97 aa8.81□□□□□ -1
VRK3-205ENST00000593919 C2orf82Q6UX34 121 aa8.81□□□□□ -1
VRK3-205ENST00000593919 DNAH10Q8IVF4 4471 aa8.8□□□□□ -1
VRK3-205ENST00000593919 M0QXV9 152 aa8.8□□□□□ -1
VRK3-205ENST00000593919 NTN5Q8WTR8 489 aaPredicted RBP8.79□□□□□ -1
VRK3-205ENST00000593919 IGKV2-28A0A075B6P5 120 aa8.79□□□□□ -1
VRK3-205ENST00000593919 TRAV13-2A0A0B4J235 113 aa8.79□□□□□ -1
VRK3-205ENST00000593919 IGKV2D-28P01615 120 aa8.79□□□□□ -1
VRK3-205ENST00000593919 KIAA0087Q14695 138 aa8.78□□□□□ -1
VRK3-205ENST00000593919 LINC00337Q8N6G1 96 aa8.78□□□□□ -1
VRK3-205ENST00000593919 MT-ATP8P03928 68 aa8.77□□□□□ -1
VRK3-205ENST00000593919 CASC10Q5T4H9 136 aa8.77□□□□□ -1.01
VRK3-205ENST00000593919 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
VRK3-205ENST00000593919 H3BT86 120 aa8.75□□□□□ -1.01
VRK3-205ENST00000593919 XGP55808 180 aa8.75□□□□□ -1.01
VRK3-205ENST00000593919 C15orf56Q8N910 161 aa8.75□□□□□ -1.01
VRK3-205ENST00000593919 RMI2Q96E14 147 aa8.75□□□□□ -1.01
VRK3-205ENST00000593919 LINC00526Q96FQ7 95 aa8.75□□□□□ -1.01
VRK3-205ENST00000593919 NBDYA0A0U1RRE5 68 aa8.75□□□□□ -1.01
VRK3-205ENST00000593919 C6orf223Q8N319 242 aa8.75□□□□□ -1.01
VRK3-205ENST00000593919 LINC01600Q96MT4 127 aa8.75□□□□□ -1.01
VRK3-205ENST00000593919 TEX49A0A1B0GTD5 131 aa8.74□□□□□ -1.01
VRK3-205ENST00000593919 CXCL5P42830 114 aa8.74□□□□□ -1.01
VRK3-205ENST00000593919 TTC32Q5I0X7 151 aa8.74□□□□□ -1.01
VRK3-205ENST00000593919 RPL28P46779 137 aaKnown RBP8.73□□□□□ -1.01
VRK3-205ENST00000593919 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
VRK3-205ENST00000593919 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
VRK3-205ENST00000593919 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
VRK3-205ENST00000593919 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
VRK3-205ENST00000593919 FAM218AQ96MZ4 157 aa8.72□□□□□ -1.01
VRK3-205ENST00000593919 C3orf84H3BNL1 204 aa8.72□□□□□ -1.01
VRK3-205ENST00000593919 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
VRK3-205ENST00000593919 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
VRK3-205ENST00000593919 GVQW2A0A096LPI5 108 aaPredicted RBP8.7□□□□□ -1.02
VRK3-205ENST00000593919 M0R2N4 97 aa8.7□□□□□ -1.02
VRK3-205ENST00000593919 ALMS1Q8TCU4 4167 aa8.7□□□□□ -1.02
VRK3-205ENST00000593919 DNAH6Q9C0G6 4158 aa8.7□□□□□ -1.02
VRK3-205ENST00000593919 TRACP01848 142 aa8.7□□□□□ -1.02
VRK3-205ENST00000593919 COX17Q14061 63 aa8.7□□□□□ -1.02
VRK3-205ENST00000593919 LECT2O14960 151 aa8.69□□□□□ -1.02
VRK3-205ENST00000593919 LY6G6CO95867 125 aa8.69□□□□□ -1.02
VRK3-205ENST00000593919 PSCAO43653 123 aa8.68□□□□□ -1.02
VRK3-205ENST00000593919 PRR3P79522 188 aaKnown RBP8.68□□□□□ -1.02
VRK3-205ENST00000593919 LINC00476Q8WZB0 136 aa8.68□□□□□ -1.02
VRK3-205ENST00000593919 CAMK2N2Q96S95 79 aa8.68□□□□□ -1.02
VRK3-205ENST00000593919 C2orf48Q96LS8 159 aa8.67□□□□□ -1.02
VRK3-205ENST00000593919 C6orf48Q9UBA6 75 aa8.67□□□□□ -1.02
VRK3-205ENST00000593919 A0A087WYN8 130 aa8.66□□□□□ -1.02
VRK3-205ENST00000593919 BAALC-AS2P0C853 105 aa8.66□□□□□ -1.02
VRK3-205ENST00000593919 Q6ZRU5 148 aa8.66□□□□□ -1.02
VRK3-205ENST00000593919 SS18L2Q9UHA2 77 aa8.66□□□□□ -1.02
VRK3-205ENST00000593919 Q6ZR54 194 aa8.66□□□□□ -1.02
VRK3-205ENST00000593919 Q6ZRN7 208 aaPredicted RBP8.66□□□□□ -1.02
VRK3-205ENST00000593919 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
VRK3-205ENST00000593919 NCR3O14931 201 aa8.64□□□□□ -1.03
VRK3-205ENST00000593919 DNAH2Q9P225 4427 aa8.64□□□□□ -1.03
VRK3-205ENST00000593919 H0YGX0 51 aa8.64□□□□□ -1.03
VRK3-205ENST00000593919 NDUFC2O95298 119 aa8.64□□□□□ -1.03
VRK3-205ENST00000593919 DNAL4O96015 105 aa8.64□□□□□ -1.03
VRK3-205ENST00000593919 C5orf47Q569G3 176 aa8.64□□□□□ -1.03
VRK3-205ENST00000593919 Q8NDZ9 215 aa8.64□□□□□ -1.03
VRK3-205ENST00000593919 SLPIP03973 132 aa8.63□□□□□ -1.03
VRK3-205ENST00000593919 SYCNQ0VAF6 134 aa8.63□□□□□ -1.03
VRK3-205ENST00000593919 FRAS1Q86XX4 4008 aa8.63□□□□□ -1.03
VRK3-205ENST00000593919 H3BS24 57 aa8.62□□□□□ -1.03
VRK3-205ENST00000593919 HECTD4Q9Y4D8 3996 aa8.62□□□□□ -1.03
VRK3-205ENST00000593919 C22orf24Q9Y442 160 aa8.61□□□□□ -1.03
VRK3-205ENST00000593919 HYDINQ4G0P3 5121 aa8.61□□□□□ -1.03
VRK3-205ENST00000593919 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
VRK3-205ENST00000593919 TMEM126AQ9H061 195 aa8.61□□□□□ -1.03
VRK3-205ENST00000593919 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
VRK3-205ENST00000593919 B5MCH6 92 aa8.6□□□□□ -1.03
VRK3-205ENST00000593919 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
VRK3-205ENST00000593919 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
VRK3-205ENST00000593919 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
VRK3-205ENST00000593919 NDUFV3P56181 108 aaKnown RBP8.57□□□□□ -1.04
VRK3-205ENST00000593919 C1orf134Q5TEV5 83 aa8.57□□□□□ -1.04
VRK3-205ENST00000593919 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
VRK3-205ENST00000593919 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
VRK3-205ENST00000593919 RPL18AQ02543 176 aaKnown RBP8.57□□□□□ -1.04
VRK3-205ENST00000593919 Q6ZRP5 223 aa8.57□□□□□ -1.04
VRK3-205ENST00000593919 FAM240AA0A1B0GVK7 77 aa8.56□□□□□ -1.04
VRK3-205ENST00000593919 CCDC179H3BU77 68 aa8.56□□□□□ -1.04
VRK3-205ENST00000593919 SNCGO76070 127 aa8.56□□□□□ -1.04
VRK3-205ENST00000593919 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
VRK3-205ENST00000593919 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
VRK3-205ENST00000593919 GAGE2EQ4V326 116 aa8.55□□□□□ -1.04
VRK3-205ENST00000593919 C6orf99Q4VX62 202 aa8.55□□□□□ -1.04
VRK3-205ENST00000593919 GAGE2DQ9UEU5 116 aa8.55□□□□□ -1.04
VRK3-205ENST00000593919 SACSQ9NZJ4 4579 aa8.55□□□□□ -1.04
VRK3-205ENST00000593919 Q6Q795 121 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms