RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 C9orf116Q5BN46 136 aaPredicted RBP8.79□□□□□ -1
VMP1-217ENST00000593168 APOBP04114 4563 aaKnown RBP8.78□□□□□ -1
VMP1-217ENST00000593168 LOC107984156A0A0G2JMH3 177 aa8.78□□□□□ -1
VMP1-217ENST00000593168 A4D1N5 150 aa8.78□□□□□ -1
VMP1-217ENST00000593168 SLPIP03973 132 aa8.78□□□□□ -1
VMP1-217ENST00000593168 COL5A1-AS1Q5SY13 56 aa8.78□□□□□ -1
VMP1-217ENST00000593168 C1orf134Q5TEV5 83 aa8.78□□□□□ -1
VMP1-217ENST00000593168 ARL17AQ8IVW1 177 aa8.78□□□□□ -1
VMP1-217ENST00000593168 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
VMP1-217ENST00000593168 NPC2P61916 151 aa8.77□□□□□ -1.01
VMP1-217ENST00000593168 SOSTDC1Q6X4U4 206 aa8.77□□□□□ -1.01
VMP1-217ENST00000593168 CARD19Q96LW7 228 aa8.77□□□□□ -1.01
VMP1-217ENST00000593168 DNAH5Q8TE73 4624 aa8.76□□□□□ -1.01
VMP1-217ENST00000593168 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.76□□□□□ -1.01
VMP1-217ENST00000593168 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
VMP1-217ENST00000593168 CNBPP62633 177 aaKnown RBP8.76□□□□□ -1.01
VMP1-217ENST00000593168 NHP2Q9NX24 153 aaKnown RBP8.76□□□□□ -1.01
VMP1-217ENST00000593168 NDUFC2-KCTD14E9PQ53 114 aa8.75□□□□□ -1.01
VMP1-217ENST00000593168 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
VMP1-217ENST00000593168 SND1-IT1Q9HBX3 110 aa8.75□□□□□ -1.01
VMP1-217ENST00000593168 CFC1BP0CG36 223 aa8.74□□□□□ -1.01
VMP1-217ENST00000593168 CFC1P0CG37 223 aa8.74□□□□□ -1.01
VMP1-217ENST00000593168 A0A087WTM6 91 aa8.73□□□□□ -1.01
VMP1-217ENST00000593168 A0A0B4J2C4 111 aa8.73□□□□□ -1.01
VMP1-217ENST00000593168 CDK2AP2O75956 126 aa8.72□□□□□ -1.01
VMP1-217ENST00000593168 C16orf90A8MZG2 172 aa8.71□□□□□ -1.02
VMP1-217ENST00000593168 TAX1BP3O14907 124 aa8.71□□□□□ -1.02
VMP1-217ENST00000593168 NDUFC2O95298 119 aa8.71□□□□□ -1.02
VMP1-217ENST00000593168 Q8N814 137 aa8.71□□□□□ -1.02
VMP1-217ENST00000593168 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
VMP1-217ENST00000593168 K7ERJ3 54 aa8.7□□□□□ -1.02
VMP1-217ENST00000593168 TNP2Q05952 138 aa8.7□□□□□ -1.02
VMP1-217ENST00000593168 Q6ZRP5 223 aa8.7□□□□□ -1.02
VMP1-217ENST00000593168 RAB37Q96AX2 223 aa8.7□□□□□ -1.02
VMP1-217ENST00000593168 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.69□□□□□ -1.02
VMP1-217ENST00000593168 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
VMP1-217ENST00000593168 GAGE2EQ4V326 116 aa8.68□□□□□ -1.02
VMP1-217ENST00000593168 Q8N1X5 172 aa8.68□□□□□ -1.02
VMP1-217ENST00000593168 C9orf163Q8N9P6 203 aa8.68□□□□□ -1.02
VMP1-217ENST00000593168 XAGE1AQ9HD64 81 aa8.68□□□□□ -1.02
VMP1-217ENST00000593168 GAGE2DQ9UEU5 116 aa8.68□□□□□ -1.02
VMP1-217ENST00000593168 TRAV13-2A0A0B4J235 113 aa8.67□□□□□ -1.02
VMP1-217ENST00000593168 C9orf118A6NHY6 69 aa8.67□□□□□ -1.02
VMP1-217ENST00000593168 PKIGQ9Y2B9 76 aa8.67□□□□□ -1.02
VMP1-217ENST00000593168 IGKV2-28A0A075B6P5 120 aa8.66□□□□□ -1.02
VMP1-217ENST00000593168 IGKV2D-28P01615 120 aa8.66□□□□□ -1.02
VMP1-217ENST00000593168 RPL18AQ02543 176 aaKnown RBP8.66□□□□□ -1.02
VMP1-217ENST00000593168 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
VMP1-217ENST00000593168 PGPEP1Q9NXJ5 209 aa8.65□□□□□ -1.02
VMP1-217ENST00000593168 PLA2G2DQ9UNK4 145 aa8.65□□□□□ -1.02
VMP1-217ENST00000593168 TRBV10-2A0A0K0K1G8 114 aa8.64□□□□□ -1.03
VMP1-217ENST00000593168 GAGE2BQ13066 116 aa8.64□□□□□ -1.03
VMP1-217ENST00000593168 LINC00337Q8N6G1 96 aa8.64□□□□□ -1.03
VMP1-217ENST00000593168 H3BUT2 72 aa8.63□□□□□ -1.03
VMP1-217ENST00000593168 TSPAN13O95857 204 aa8.63□□□□□ -1.03
VMP1-217ENST00000593168 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
VMP1-217ENST00000593168 Q8NDZ9 215 aa8.63□□□□□ -1.03
VMP1-217ENST00000593168 VPREB1P12018 145 aa8.62□□□□□ -1.03
VMP1-217ENST00000593168 PRR3P79522 188 aaKnown RBP8.62□□□□□ -1.03
VMP1-217ENST00000593168 SDIM1Q6ZPB5 146 aa8.62□□□□□ -1.03
VMP1-217ENST00000593168 A0A096LNI7 61 aa8.6□□□□□ -1.03
VMP1-217ENST00000593168 A0A1B0GV90 55 aa8.6□□□□□ -1.03
VMP1-217ENST00000593168 Q1RN00 199 aa8.6□□□□□ -1.03
VMP1-217ENST00000593168 TMEM126AQ9H061 195 aa8.6□□□□□ -1.03
VMP1-217ENST00000593168 IGLV5-37A0A075B6J1 123 aa8.59□□□□□ -1.03
VMP1-217ENST00000593168 A0A1W2PPM0 123 aa8.59□□□□□ -1.03
VMP1-217ENST00000593168 H7C2G1 150 aa8.59□□□□□ -1.03
VMP1-217ENST00000593168 M0R378 163 aa8.59□□□□□ -1.03
VMP1-217ENST00000593168 NCR3O14931 201 aa8.59□□□□□ -1.03
VMP1-217ENST00000593168 OR13C6PQ8NH95 151 aa8.59□□□□□ -1.03
VMP1-217ENST00000593168 NAA38Q9BRA0 125 aaKnown RBP8.59□□□□□ -1.03
VMP1-217ENST00000593168 IGLV5-52A0A0A0MRZ9 124 aa8.58□□□□□ -1.04
VMP1-217ENST00000593168 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
VMP1-217ENST00000593168 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
VMP1-217ENST00000593168 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
VMP1-217ENST00000593168 IGKV2-24A0A0C4DH68 120 aa8.57□□□□□ -1.04
VMP1-217ENST00000593168 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
VMP1-217ENST00000593168 FABP2P12104 132 aa8.57□□□□□ -1.04
VMP1-217ENST00000593168 RPL28P46779 137 aaKnown RBP8.57□□□□□ -1.04
VMP1-217ENST00000593168 PSMB2P49721 201 aa8.57□□□□□ -1.04
VMP1-217ENST00000593168 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
VMP1-217ENST00000593168 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
VMP1-217ENST00000593168 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
VMP1-217ENST00000593168 LYRM7Q5U5X0 104 aa8.56□□□□□ -1.04
VMP1-217ENST00000593168 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
VMP1-217ENST00000593168 NKAPP1Q8N9T2 125 aa8.56□□□□□ -1.04
VMP1-217ENST00000593168 FAT1Q14517 4588 aa8.55□□□□□ -1.04
VMP1-217ENST00000593168 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
VMP1-217ENST00000593168 COX6CP09669 75 aa8.55□□□□□ -1.04
VMP1-217ENST00000593168 VAMP3Q15836 100 aa8.55□□□□□ -1.04
VMP1-217ENST00000593168 SMIM11BQ8TCY0 68 aa8.55□□□□□ -1.04
VMP1-217ENST00000593168 TRIAP1O43715 76 aa8.54□□□□□ -1.04
VMP1-217ENST00000593168 SCGB1C2P0DMR2 95 aa8.54□□□□□ -1.04
VMP1-217ENST00000593168 CBY1Q9Y3M2 126 aa8.54□□□□□ -1.04
VMP1-217ENST00000593168 C22orf24Q9Y442 160 aa8.54□□□□□ -1.04
VMP1-217ENST00000593168 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
VMP1-217ENST00000593168 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
VMP1-217ENST00000593168 TRBV10-3A0A0K0K1G6 114 aa8.53□□□□□ -1.04
VMP1-217ENST00000593168 A0A1W2PNN7 141 aa8.53□□□□□ -1.04
VMP1-217ENST00000593168 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms