RNA–Protein interactions for RNA: ENST00000591994.1

RPRD1A-210, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2

Gene RPRD1A, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-210ENST00000591994 SNRNP25Q9BV90 132 aaKnown RBP0.05□□□□□ -2.4
RPRD1A-210ENST00000591994 DNAH5Q8TE73 4624 aa0.05□□□□□ -2.4
RPRD1A-210ENST00000591994 FLGP20930 4061 aaPredicted RBP0.05□□□□□ -2.4
RPRD1A-210ENST00000591994 DSPP15924 2871 aaKnown RBP0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 CPSF1Q10570 1443 aaKnown RBP0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 G3V318 75 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 K7EP13 123 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 Q6AWC8 147 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 Q6ZRX8 168 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 KCNRGQ8N5I3 272 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 C1orf54Q8WWF1 131 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 COPS9Q8WXC6 57 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 SPRR2FQ96RM1 72 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 RERGLQ9H628 205 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 HUWE1Q7Z6Z7 4374 aaKnown RBP0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 NIPBLQ6KC79 2804 aaeCLIP0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 LPAP08519 4548 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 ANK3Q12955 4377 aaKnown RBP0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 SMR3BP02814 79 aaPredicted RBP0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 NMBP08949 121 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 ACYP2P14621 99 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 UBE2G1P62253 170 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 COX6A2Q02221 97 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 KRTAP6-1Q3LI64 71 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 LINC00470Q9BZP3 86 aa0.04□□□□□ -2.4
RPRD1A-210ENST00000591994 FAT2Q9NYQ8 4349 aa0.03□□□□□ -2.4
RPRD1A-210ENST00000591994 TRGV1A0A0A0MS02 117 aa0.03□□□□□ -2.4
RPRD1A-210ENST00000591994 SIX6O95475 246 aa0.03□□□□□ -2.4
RPRD1A-210ENST00000591994 Q5BKY6 102 aa0.03□□□□□ -2.4
RPRD1A-210ENST00000591994 RPL7L1Q6DKI1 246 aaKnown RBP0.03□□□□□ -2.4
RPRD1A-210ENST00000591994 AGPAT4-IT1Q9H0P7 198 aa0.03□□□□□ -2.4
RPRD1A-210ENST00000591994 PLIN4Q96Q06 1357 aa0.03□□□□□ -2.4
RPRD1A-210ENST00000591994 KALRNO60229 2985 aa0.03□□□□□ -2.41
RPRD1A-210ENST00000591994 A6NIN4 97 aa0.03□□□□□ -2.41
RPRD1A-210ENST00000591994 MT1BP07438 61 aa0.03□□□□□ -2.41
RPRD1A-210ENST00000591994 CCL18P55774 89 aa0.03□□□□□ -2.41
RPRD1A-210ENST00000591994 Q8N8P6 123 aa0.03□□□□□ -2.41
RPRD1A-210ENST00000591994 FDCSPQ8NFU4 85 aa0.03□□□□□ -2.41
RPRD1A-210ENST00000591994 ARL11Q969Q4 196 aa0.03□□□□□ -2.41
RPRD1A-210ENST00000591994 SERP1Q9Y6X1 66 aa0.03□□□□□ -2.41
RPRD1A-210ENST00000591994 GOLGA4Q13439 2230 aaKnown RBP0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 SRCAPQ6ZRS2 3230 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 MT1FP04733 61 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 FGF7P21781 194 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 S100A7L2Q5SY68 101 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 BAGE3Q86Y29 109 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 TRRAPQ9Y4A5 3859 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 CEP162Q5TB80 1403 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 TACC2O95359 2948 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 URB1O60287 2271 aaKnown RBP0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 RBM3P98179 157 aaKnown RBP0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 LSM10Q969L4 123 aaKnown RBP0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 CNFNQ9BYD5 112 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 LENEPQ9Y5L5 61 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 LINC00312Q9Y6C7 94 aa0.02□□□□□ -2.41
RPRD1A-210ENST00000591994 COL12A1Q99715 3063 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 KNL1Q8NG31 2342 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 AKAP13Q12802 2813 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 DNAH9Q9NYC9 4486 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 GCC2Q8IWJ2 1684 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 CEP350Q5VT06 3117 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 PIGBOS1A0A0B4J2F0 54 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 SNCGO76070 127 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 GCHFRP30047 84 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 MT1HP80294 61 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 CCDC58Q4VC31 144 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 KRTAP8-1Q8IUC2 63 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 SPTSSBQ8NFR3 76 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 NAA60Q9H7X0 242 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 TRAV13-2A0A0B4J235 113 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 TRAV1-2A0A0B4J238 106 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 HCG22E2RYF7 251 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 TFF3Q07654 80 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 DEFB124Q8NES8 71 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 PDCD10Q9BUL8 212 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 CYP4F30PQ9H0H9 118 aa0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 DNAH17Q9UFH2 4485 aa0□□□□□ -2.41
RPRD1A-210ENST00000591994 APOBP04114 4563 aaKnown RBP0□□□□□ -2.41
RPRD1A-210ENST00000591994 DNAH10Q8IVF4 4471 aa0□□□□□ -2.41
RPRD1A-210ENST00000591994 EFCAB10A6NFE3 127 aa0□□□□□ -2.41
RPRD1A-210ENST00000591994 SPINK1P00995 79 aa0□□□□□ -2.41
RPRD1A-210ENST00000591994 SPINK8P0C7L1 97 aa0□□□□□ -2.41
RPRD1A-210ENST00000591994 AMELXQ99217 191 aa0□□□□□ -2.41
RPRD1A-210ENST00000591994 LRBAP50851 2863 aa-0□□□□□ -2.41
RPRD1A-210ENST00000591994 TCHHQ07283 1943 aa-0□□□□□ -2.41
RPRD1A-210ENST00000591994 CCNB3Q8WWL7 1395 aa-0□□□□□ -2.41
RPRD1A-210ENST00000591994 UBE2DNLQ8IWF7 75 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 SEC11CQ9BY50 192 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 DNAH8Q96JB1 4490 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 AKAP9Q99996 3911 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 ZFHX3Q15911 3703 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 DNAH2Q9P225 4427 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 WDR87Q6ZQQ6 2873 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 DNAH11Q96DT5 4516 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 HIST1H1DP16402 221 aaKnown RBP-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 Q56UQ5 140 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 MEIG1Q5JSS6 88 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 LINC01600Q96MT4 127 aa-0.01□□□□□ -2.41
RPRD1A-210ENST00000591994 TSC22D3Q99576 134 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms