RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 CACNA1EQ15878 2313 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 IGHV3-72A0A0B4J1Y9 119 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 A0A1W2PNM2 257 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 PRB1P04280 392 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 PRB3Q04118 309 aaPredicted RBP3.67□□□□□ -1.82
LINC01538-201ENST00000588074 U3KQA8 63 aa3.67□□□□□ -1.82
LINC01538-201ENST00000588074 IGLV1-44P01699 117 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 SPAG11BQ08648 103 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 OTOGLQ3ZCN5 2332 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 LINC00467Q9BRT7 94 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 IGHV3OR16-8A0A075B7F1 116 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 SPINK7P58062 85 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 MUC4Q99102 2169 aa3.66□□□□□ -1.82
LINC01538-201ENST00000588074 GVINP1Q7Z2Y8 2422 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 IGHV3-66A0A0C4DH42 116 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 CASC10Q5T4H9 136 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 COA5Q86WW8 74 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 Q8N9L7 120 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 SPTBN2O15020 2390 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 SEC16AO15027 2179 aa3.65□□□□□ -1.82
LINC01538-201ENST00000588074 HIGD2BQ4VC39 106 aa3.65□□□□□ -1.83
LINC01538-201ENST00000588074 TTTY12Q9BZ98 90 aa3.65□□□□□ -1.83
LINC01538-201ENST00000588074 CNTRLQ7Z7A1 2325 aa3.65□□□□□ -1.83
LINC01538-201ENST00000588074 CFAP47Q6ZTR5 3102 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 ZFHX4Q86UP3 3567 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 IGLV1-47P01700 117 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 CSAG1Q6PB30 78 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 SPAG11AQ6PDA7 123 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 FRYQ5TBA9 3013 aa3.64□□□□□ -1.83
LINC01538-201ENST00000588074 H0Y9P7 68 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.63□□□□□ -1.83
LINC01538-201ENST00000588074 FAM186AA6NE01 2351 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 ASCC3Q8N3C0 2202 aaKnown RBP3.63□□□□□ -1.83
LINC01538-201ENST00000588074 CEP250Q9BV73 2442 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 PRB2P02812 416 aaPredicted RBP3.63□□□□□ -1.83
LINC01538-201ENST00000588074 KLK9Q2XQG4 91 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 ST20-AS1Q8NBB2 130 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 LOC400499M0QZD8 3231 aa3.63□□□□□ -1.83
LINC01538-201ENST00000588074 ASXL3Q9C0F0 2248 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 A0A1W2PNU3 283 aaPredicted RBP3.62□□□□□ -1.83
LINC01538-201ENST00000588074 Q6ZR54 194 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 ZNF292O60281 2723 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 CCL3L1P16619 93 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 KPRPQ5T749 579 aaPredicted RBP3.62□□□□□ -1.83
LINC01538-201ENST00000588074 NPBQ8NG41 125 aa3.62□□□□□ -1.83
LINC01538-201ENST00000588074 CNOT1A5YKK6 2376 aaKnown RBP3.61□□□□□ -1.83
LINC01538-201ENST00000588074 LYPD2Q6UXB3 125 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 PTPRQQ9UMZ3 2332 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 TRGV4A0A0C4DH28 118 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 GIG44P09565 113 aaPredicted RBP3.61□□□□□ -1.83
LINC01538-201ENST00000588074 DEFB112Q30KQ8 113 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 CNEP1R1Q8N9A8 125 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
LINC01538-201ENST00000588074 KRTAP16-1A8MUX0 517 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 Q6ZQY7 126 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 PLCE1Q9P212 2302 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 A0A1W2PPR1 153 aa3.6□□□□□ -1.83
LINC01538-201ENST00000588074 PIEZO1Q92508 2521 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 SPENQ96T58 3664 aaKnown RBP3.59□□□□□ -1.83
LINC01538-201ENST00000588074 LINC00959A0A1B0GUT2 108 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 IGHV1-46P01743 117 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 NCOR2Q9Y618 2525 aa3.59□□□□□ -1.83
LINC01538-201ENST00000588074 AKAP13Q12802 2813 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 SPTBN4Q9H254 2564 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 DMXL2Q8TDJ6 3036 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 IGHV3-74A0A0B4J1X5 117 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 COX17Q14061 63 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 SPATA8Q6RVD6 105 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 Q8NDZ9 215 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 DEFB108BQ8NET1 73 aa3.58□□□□□ -1.84
LINC01538-201ENST00000588074 TOMM7Q9P0U1 55 aa3.57□□□□□ -1.84
LINC01538-201ENST00000588074 SMG1Q96Q15 3661 aaKnown RBP3.57□□□□□ -1.84
LINC01538-201ENST00000588074 SPINK14Q6IE38 97 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 FAM215AQ9Y5M1 114 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 CEP295Q9C0D2 2601 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 KLK12Q9UKR0 248 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 BOD1L1Q8NFC6 3051 aa3.56□□□□□ -1.84
LINC01538-201ENST00000588074 KRTAP19-1Q8IUB9 90 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 Q8N9W7 124 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 ZZEF1O43149 2961 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 AHCTF1Q8WYP5 2266 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 MSMBP08118 114 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 IGF2RP11717 2491 aa3.55□□□□□ -1.84
LINC01538-201ENST00000588074 Q8IZM0 81 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 KAAG1Q9UBP8 84 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 MGAQ8IWI9 3026 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 CHD8Q9HCK8 2581 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 IGKV2D-24A0A075B6R9 120 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 ODF3BA8MYP8 253 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 IGLV6-57P01721 117 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 CMC4P56277 68 aaPredicted RBP3.54□□□□□ -1.84
LINC01538-201ENST00000588074 DEFB109BQ30KR1 87 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
LINC01538-201ENST00000588074 DSCR10P59022 87 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 KRTAP24-1Q3LI83 254 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 SPRR4Q96PI1 79 aa3.53□□□□□ -1.84
LINC01538-201ENST00000588074 ATMQ13315 3056 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms