RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 LYRM7Q5U5X0 104 aa8.27□□□□□ -1.09
VMP1-202ENST00000585847 TRAV13-2A0A0B4J235 113 aa8.26□□□□□ -1.09
VMP1-202ENST00000585847 A4D1N5 150 aa8.26□□□□□ -1.09
VMP1-202ENST00000585847 HIGD2BQ4VC39 106 aa8.26□□□□□ -1.09
VMP1-202ENST00000585847 UNQ6190/PRO20217Q6UXQ8 127 aa8.26□□□□□ -1.09
VMP1-202ENST00000585847 RAB37Q96AX2 223 aa8.26□□□□□ -1.09
VMP1-202ENST00000585847 NHP2Q9NX24 153 aaKnown RBP8.26□□□□□ -1.09
VMP1-202ENST00000585847 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
VMP1-202ENST00000585847 CBY1Q9Y3M2 126 aa8.26□□□□□ -1.09
VMP1-202ENST00000585847 DNAH5Q8TE73 4624 aa8.25□□□□□ -1.09
VMP1-202ENST00000585847 PFN2P35080 140 aa8.25□□□□□ -1.09
VMP1-202ENST00000585847 PRO1854Q9UHT4 67 aa8.25□□□□□ -1.09
VMP1-202ENST00000585847 DYNC1H1Q14204 4646 aaKnown RBP8.25□□□□□ -1.09
VMP1-202ENST00000585847 SND1-IT1Q9HBX3 110 aa8.24□□□□□ -1.09
VMP1-202ENST00000585847 TRBV10-2A0A0K0K1G8 114 aa8.23□□□□□ -1.09
VMP1-202ENST00000585847 LECT2O14960 151 aa8.23□□□□□ -1.09
VMP1-202ENST00000585847 Q6ZRU5 148 aa8.23□□□□□ -1.09
VMP1-202ENST00000585847 FUSP35637 526 aaKnown RBP eCLIP8.22□□□□□ -1.09
VMP1-202ENST00000585847 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
VMP1-202ENST00000585847 C10orf25Q5T742 122 aa8.22□□□□□ -1.09
VMP1-202ENST00000585847 LOC107984640A0A0U1RRK4 108 aa8.21□□□□□ -1.1
VMP1-202ENST00000585847 C9orf118A6NHY6 69 aa8.21□□□□□ -1.1
VMP1-202ENST00000585847 CFC1BP0CG36 223 aa8.21□□□□□ -1.1
VMP1-202ENST00000585847 CFC1P0CG37 223 aa8.21□□□□□ -1.1
VMP1-202ENST00000585847 Q8N814 137 aa8.21□□□□□ -1.1
VMP1-202ENST00000585847 DAND5Q8N907 189 aa8.21□□□□□ -1.1
VMP1-202ENST00000585847 A0A0U1RRA0 63 aa8.2□□□□□ -1.1
VMP1-202ENST00000585847 TAX1BP3O14907 124 aa8.2□□□□□ -1.1
VMP1-202ENST00000585847 LINC00474Q9P2X8 69 aa8.2□□□□□ -1.1
VMP1-202ENST00000585847 PLA2G2DQ9UNK4 145 aa8.2□□□□□ -1.1
VMP1-202ENST00000585847 SOSTDC1Q6X4U4 206 aa8.19□□□□□ -1.1
VMP1-202ENST00000585847 SLPIP03973 132 aa8.18□□□□□ -1.1
VMP1-202ENST00000585847 COX6CP09669 75 aa8.18□□□□□ -1.1
VMP1-202ENST00000585847 FABP2P12104 132 aa8.18□□□□□ -1.1
VMP1-202ENST00000585847 LINC00526Q96FQ7 95 aa8.18□□□□□ -1.1
VMP1-202ENST00000585847 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
VMP1-202ENST00000585847 TMEM126AQ9H061 195 aa8.18□□□□□ -1.1
VMP1-202ENST00000585847 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
VMP1-202ENST00000585847 DNAH8Q96JB1 4490 aa8.17□□□□□ -1.1
VMP1-202ENST00000585847 C9orf116Q5BN46 136 aaPredicted RBP8.17□□□□□ -1.1
VMP1-202ENST00000585847 LRP1BQ9NZR2 4599 aa8.17□□□□□ -1.1
VMP1-202ENST00000585847 TRBV20-1A0A075B6N2 111 aa8.16□□□□□ -1.1
VMP1-202ENST00000585847 C16orf90A8MZG2 172 aa8.16□□□□□ -1.1
VMP1-202ENST00000585847 K7ERJ3 54 aa8.16□□□□□ -1.1
VMP1-202ENST00000585847 NPC2P61916 151 aa8.16□□□□□ -1.1
VMP1-202ENST00000585847 C9orf163Q8N9P6 203 aa8.16□□□□□ -1.1
VMP1-202ENST00000585847 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
VMP1-202ENST00000585847 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.15□□□□□ -1.1
VMP1-202ENST00000585847 A0A1W2PPM0 123 aa8.15□□□□□ -1.1
VMP1-202ENST00000585847 RPL13AP40429 203 aaKnown RBP8.15□□□□□ -1.1
VMP1-202ENST00000585847 Q1RN00 199 aa8.15□□□□□ -1.1
VMP1-202ENST00000585847 GTF2H5Q6ZYL4 71 aa8.15□□□□□ -1.1
VMP1-202ENST00000585847 TSPAN13O95857 204 aa8.14□□□□□ -1.11
VMP1-202ENST00000585847 RPL18AQ02543 176 aaKnown RBP8.14□□□□□ -1.11
VMP1-202ENST00000585847 Q6ZRP5 223 aa8.14□□□□□ -1.11
VMP1-202ENST00000585847 CDK2AP2O75956 126 aa8.13□□□□□ -1.11
VMP1-202ENST00000585847 RPL28P46779 137 aaKnown RBP8.13□□□□□ -1.11
VMP1-202ENST00000585847 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
VMP1-202ENST00000585847 H3BUT2 72 aa8.12□□□□□ -1.11
VMP1-202ENST00000585847 M0R378 163 aa8.12□□□□□ -1.11
VMP1-202ENST00000585847 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
VMP1-202ENST00000585847 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
VMP1-202ENST00000585847 S100A7L2Q5SY68 101 aa8.12□□□□□ -1.11
VMP1-202ENST00000585847 VPREB1P12018 145 aa8.11□□□□□ -1.11
VMP1-202ENST00000585847 PSMB2P49721 201 aa8.11□□□□□ -1.11
VMP1-202ENST00000585847 GAGE2EQ4V326 116 aa8.11□□□□□ -1.11
VMP1-202ENST00000585847 LINC00337Q8N6G1 96 aa8.11□□□□□ -1.11
VMP1-202ENST00000585847 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
VMP1-202ENST00000585847 GAGE2DQ9UEU5 116 aa8.11□□□□□ -1.11
VMP1-202ENST00000585847 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
VMP1-202ENST00000585847 H0YGX0 51 aa8.1□□□□□ -1.11
VMP1-202ENST00000585847 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
VMP1-202ENST00000585847 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
VMP1-202ENST00000585847 VAMP3Q15836 100 aa8.1□□□□□ -1.11
VMP1-202ENST00000585847 LINC01620Q4KN68 170 aa8.1□□□□□ -1.11
VMP1-202ENST00000585847 XAGE1AQ9HD64 81 aa8.1□□□□□ -1.11
VMP1-202ENST00000585847 SNCGO76070 127 aa8.09□□□□□ -1.11
VMP1-202ENST00000585847 OR13C6PQ8NH95 151 aa8.09□□□□□ -1.11
VMP1-202ENST00000585847 TRBV7-6A0A0J9YX20 115 aa8.08□□□□□ -1.12
VMP1-202ENST00000585847 A0A1B0GX51 115 aa8.08□□□□□ -1.12
VMP1-202ENST00000585847 K7EP34 96 aa8.08□□□□□ -1.12
VMP1-202ENST00000585847 SCGB1C2P0DMR2 95 aa8.08□□□□□ -1.12
VMP1-202ENST00000585847 C9orf129Q5T035 196 aaKnown RBP8.08□□□□□ -1.12
VMP1-202ENST00000585847 SPCS1Q9Y6A9 102 aa8.08□□□□□ -1.12
VMP1-202ENST00000585847 APOBP04114 4563 aaKnown RBP8.08□□□□□ -1.12
VMP1-202ENST00000585847 HSPG2P98160 4391 aa8.08□□□□□ -1.12
VMP1-202ENST00000585847 A0A1B0GV90 55 aa8.07□□□□□ -1.12
VMP1-202ENST00000585847 GAGE10A6NGK3 116 aa8.07□□□□□ -1.12
VMP1-202ENST00000585847 GAGE2BQ13066 116 aa8.07□□□□□ -1.12
VMP1-202ENST00000585847 Q8N1X5 172 aa8.07□□□□□ -1.12
VMP1-202ENST00000585847 LCE2BO14633 110 aa8.06□□□□□ -1.12
VMP1-202ENST00000585847 TRIAP1O43715 76 aa8.06□□□□□ -1.12
VMP1-202ENST00000585847 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
VMP1-202ENST00000585847 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
VMP1-202ENST00000585847 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
VMP1-202ENST00000585847 H7C2G1 150 aa8.05□□□□□ -1.12
VMP1-202ENST00000585847 NCR3O14931 201 aa8.05□□□□□ -1.12
VMP1-202ENST00000585847 GHRHP01286 108 aa8.05□□□□□ -1.12
VMP1-202ENST00000585847 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
VMP1-202ENST00000585847 FAM30AQ9NZY2 134 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms