RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 Q6ZRN7 208 aaPredicted RBP3.82□□□□□ -1.8
MSI2-219ENST00000584476 Q6ZRU5 148 aa3.82□□□□□ -1.8
MSI2-219ENST00000584476 LINC00308Q8TCZ7 52 aa3.82□□□□□ -1.8
MSI2-219ENST00000584476 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
MSI2-219ENST00000584476 CAMK2N2Q96S95 79 aa3.82□□□□□ -1.8
MSI2-219ENST00000584476 COX11Q9Y6N1 276 aa3.82□□□□□ -1.8
MSI2-219ENST00000584476 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
MSI2-219ENST00000584476 SYCNQ0VAF6 134 aa3.81□□□□□ -1.8
MSI2-219ENST00000584476 Q6ZVH6 145 aa3.81□□□□□ -1.8
MSI2-219ENST00000584476 NHP2Q9NX24 153 aaKnown RBP3.81□□□□□ -1.8
MSI2-219ENST00000584476 TRBV30A0A0K0K1B3 111 aa3.8□□□□□ -1.8
MSI2-219ENST00000584476 LRCOL1A6NCL2 159 aa3.8□□□□□ -1.8
MSI2-219ENST00000584476 A6NDN8 102 aa3.8□□□□□ -1.8
MSI2-219ENST00000584476 TAX1BP3O14907 124 aa3.8□□□□□ -1.8
MSI2-219ENST00000584476 IFITM1P13164 125 aa3.8□□□□□ -1.8
MSI2-219ENST00000584476 RPL24P83731 157 aaKnown RBP3.8□□□□□ -1.8
MSI2-219ENST00000584476 COL5A1-AS1Q5SY13 56 aa3.8□□□□□ -1.8
MSI2-219ENST00000584476 RAB37Q96AX2 223 aa3.8□□□□□ -1.8
MSI2-219ENST00000584476 SND1-IT1Q9HBX3 110 aa3.8□□□□□ -1.8
MSI2-219ENST00000584476 A0A1B0GWB2 263 aa3.79□□□□□ -1.8
MSI2-219ENST00000584476 F8WDY8 70 aa3.79□□□□□ -1.8
MSI2-219ENST00000584476 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
MSI2-219ENST00000584476 CFC1P0CG37 223 aa3.79□□□□□ -1.8
MSI2-219ENST00000584476 COX17Q14061 63 aa3.79□□□□□ -1.8
MSI2-219ENST00000584476 CARD19Q96LW7 228 aa3.79□□□□□ -1.8
MSI2-219ENST00000584476 NAA38Q9BRA0 125 aaKnown RBP3.79□□□□□ -1.8
MSI2-219ENST00000584476 CSMD3Q7Z407 3707 aa3.79□□□□□ -1.8
MSI2-219ENST00000584476 STARD9Q9P2P6 4700 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
MSI2-219ENST00000584476 LOC107984156A0A0G2JMH3 177 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 A0A1B0GV90 55 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 PCP4P48539 62 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 LBHQ53QV2 105 aaPredicted RBP3.78□□□□□ -1.8
MSI2-219ENST00000584476 C1orf134Q5TEV5 83 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 ARL17AQ8IVW1 177 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 Q8NDZ9 215 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 XAGE1AQ9HD64 81 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
MSI2-219ENST00000584476 IGKV2-28A0A075B6P5 120 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 A0A087WTM6 91 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.77□□□□□ -1.81
MSI2-219ENST00000584476 A0A0B4J2C4 111 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 NDUFC2-KCTD14E9PQ53 114 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 IGKV2D-28P01615 120 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 CNBPP62633 177 aaKnown RBP3.77□□□□□ -1.81
MSI2-219ENST00000584476 PRR3P79522 188 aaKnown RBP3.77□□□□□ -1.81
MSI2-219ENST00000584476 GAGE2EQ4V326 116 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 C14orf177Q52M58 125 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 Q6ZRP5 223 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 LINC00337Q8N6G1 96 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 COPS9Q8WXC6 57 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 PPDPFQ9H3Y8 114 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 GAGE2DQ9UEU5 116 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 PRO1854Q9UHT4 67 aa3.77□□□□□ -1.81
MSI2-219ENST00000584476 H3BUT2 72 aa3.76□□□□□ -1.81
MSI2-219ENST00000584476 H7C2G1 150 aa3.76□□□□□ -1.81
MSI2-219ENST00000584476 TSPAN13O95857 204 aa3.76□□□□□ -1.81
MSI2-219ENST00000584476 FUSP35637 526 aaKnown RBP eCLIP3.76□□□□□ -1.81
MSI2-219ENST00000584476 RPL13AP40429 203 aaKnown RBP3.76□□□□□ -1.81
MSI2-219ENST00000584476 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
MSI2-219ENST00000584476 C9orf129Q5T035 196 aaKnown RBP3.76□□□□□ -1.81
MSI2-219ENST00000584476 Q8N814 137 aa3.76□□□□□ -1.81
MSI2-219ENST00000584476 ALMS1Q8TCU4 4167 aa3.76□□□□□ -1.81
MSI2-219ENST00000584476 VPS13DQ5THJ4 4388 aa3.76□□□□□ -1.81
MSI2-219ENST00000584476 LOC107984640A0A0U1RRK4 108 aa3.75□□□□□ -1.81
MSI2-219ENST00000584476 LCE6AA0A183 80 aa3.75□□□□□ -1.81
MSI2-219ENST00000584476 NCR3O14931 201 aa3.75□□□□□ -1.81
MSI2-219ENST00000584476 RTL8CO15255 209 aa3.75□□□□□ -1.81
MSI2-219ENST00000584476 NDUFC2O95298 119 aa3.75□□□□□ -1.81
MSI2-219ENST00000584476 TLX1NBP0CAT3 122 aa3.75□□□□□ -1.81
MSI2-219ENST00000584476 GAGE2BQ13066 116 aa3.75□□□□□ -1.81
MSI2-219ENST00000584476 PLECQ15149 4684 aaKnown RBP3.75□□□□□ -1.81
MSI2-219ENST00000584476 LINC01620Q4KN68 170 aa3.75□□□□□ -1.81
MSI2-219ENST00000584476 A0A096LNI7 61 aa3.74□□□□□ -1.81
MSI2-219ENST00000584476 FAM168BA1KXE4 195 aa3.74□□□□□ -1.81
MSI2-219ENST00000584476 SERTAD4-AS1Q5TG53 156 aa3.74□□□□□ -1.81
MSI2-219ENST00000584476 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
MSI2-219ENST00000584476 TGP01266 2768 aa3.74□□□□□ -1.81
MSI2-219ENST00000584476 LYSTQ99698 3801 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 TENM2Q9NT68 2774 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 TRAV13-2A0A0B4J235 113 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 A0A1W2PPM0 123 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 CHTF8P0CG12 524 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 VPREB1P12018 145 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 Q1RN00 199 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 SDIM1Q6ZPB5 146 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 KRTAP7-1Q8IUC3 87 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 OR13C6PQ8NH95 151 aa3.73□□□□□ -1.81
MSI2-219ENST00000584476 IGKV2-24A0A0C4DH68 120 aa3.72□□□□□ -1.81
MSI2-219ENST00000584476 C16orf90A8MZG2 172 aa3.72□□□□□ -1.81
MSI2-219ENST00000584476 PRYO14603 147 aa3.72□□□□□ -1.81
MSI2-219ENST00000584476 PSMB2P49721 201 aa3.72□□□□□ -1.81
MSI2-219ENST00000584476 VAMP3Q15836 100 aa3.72□□□□□ -1.81
MSI2-219ENST00000584476 DNAH6Q9C0G6 4158 aa3.72□□□□□ -1.81
MSI2-219ENST00000584476 TRBV10-3A0A0K0K1G6 114 aa3.71□□□□□ -1.82
MSI2-219ENST00000584476 TRBV10-2A0A0K0K1G8 114 aa3.71□□□□□ -1.82
MSI2-219ENST00000584476 GAGE10A6NGK3 116 aa3.71□□□□□ -1.82
MSI2-219ENST00000584476 PANO1I0J062 215 aa3.71□□□□□ -1.82
MSI2-219ENST00000584476 IGLV6-57P01721 117 aa3.71□□□□□ -1.82
MSI2-219ENST00000584476 FABP2P12104 132 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms