RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 LINC01554Q52M75 96 aa2.63□□□□□ -1.99
TTC39C-208ENST00000584095 C9orf116Q5BN46 136 aaPredicted RBP2.63□□□□□ -1.99
TTC39C-208ENST00000584095 C20orf166-AS1Q96NR2 134 aa2.63□□□□□ -1.99
TTC39C-208ENST00000584095 CDKN2A-AS1Q9UH64 79 aa2.63□□□□□ -1.99
TTC39C-208ENST00000584095 PI4KAP42356 2102 aa2.63□□□□□ -1.99
TTC39C-208ENST00000584095 C3orf84H3BNL1 204 aa2.62□□□□□ -1.99
TTC39C-208ENST00000584095 TFF1P04155 84 aa2.62□□□□□ -1.99
TTC39C-208ENST00000584095 SPTSSBQ8NFR3 76 aa2.62□□□□□ -1.99
TTC39C-208ENST00000584095 ZCCHC13Q8WW36 166 aaKnown RBP2.62□□□□□ -1.99
TTC39C-208ENST00000584095 Q9BRP9 147 aa2.62□□□□□ -1.99
TTC39C-208ENST00000584095 DOCK10Q96BY6 2186 aa2.61□□□□□ -1.99
TTC39C-208ENST00000584095 CLPSL1A2RUU4 121 aa2.61□□□□□ -1.99
TTC39C-208ENST00000584095 PLXNB1O43157 2135 aa2.61□□□□□ -1.99
TTC39C-208ENST00000584095 DEFB133Q30KQ1 61 aa2.61□□□□□ -1.99
TTC39C-208ENST00000584095 CDC42SE2Q9NRR3 84 aa2.61□□□□□ -1.99
TTC39C-208ENST00000584095 CCL18P55774 89 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 LINC00158P58513 81 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 KRTAP10-1P60331 282 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 LINC00575Q6W349 94 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 Q6ZTI0 123 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 DEFB108BQ8NET1 73 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 COX7B2Q8TF08 81 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 CNTRLQ7Z7A1 2325 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 ARHGAP32A7KAX9 2087 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 MALRD1Q5VYJ5 2156 aa2.6□□□□□ -1.99
TTC39C-208ENST00000584095 ETDCA0A1B0GVM5 59 aa2.59□□□□□ -1.99
TTC39C-208ENST00000584095 APELAP0DMC3 54 aa2.59□□□□□ -1.99
TTC39C-208ENST00000584095 CCL3L1P16619 93 aa2.59□□□□□ -1.99
TTC39C-208ENST00000584095 COX7BP24311 80 aa2.59□□□□□ -1.99
TTC39C-208ENST00000584095 COX17Q14061 63 aa2.59□□□□□ -1.99
TTC39C-208ENST00000584095 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.59□□□□□ -1.99
TTC39C-208ENST00000584095 CASC2Q6XLA1 102 aa2.59□□□□□ -1.99
TTC39C-208ENST00000584095 TTTY12Q9BZ98 90 aa2.59□□□□□ -1.99
TTC39C-208ENST00000584095 NAV3Q8IVL0 2385 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 TRGV2A0A075B6R0 118 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.58□□□□□ -2
TTC39C-208ENST00000584095 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 NDUFA4O00483 81 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 MINOS1Q5TGZ0 78 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 LINC00208Q96KT6 92 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 MINOS1-NBL1R4GNA1 71 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 ASCC3Q8N3C0 2202 aaKnown RBP2.58□□□□□ -2
TTC39C-208ENST00000584095 BRWD1Q9NSI6 2320 aa2.58□□□□□ -2
TTC39C-208ENST00000584095 NOTCH2Q04721 2471 aa2.57□□□□□ -2
TTC39C-208ENST00000584095 DEFB103AP81534 67 aa2.57□□□□□ -2
TTC39C-208ENST00000584095 COX6A2Q02221 97 aa2.57□□□□□ -2
TTC39C-208ENST00000584095 PRR15LQ9BU68 103 aa2.57□□□□□ -2
TTC39C-208ENST00000584095 LINC01558Q9Y6Z2 57 aa2.57□□□□□ -2
TTC39C-208ENST00000584095 MED13Q9UHV7 2174 aa2.57□□□□□ -2
TTC39C-208ENST00000584095 ABCA1O95477 2261 aa2.56□□□□□ -2
TTC39C-208ENST00000584095 CNBPP62633 177 aaKnown RBP2.56□□□□□ -2
TTC39C-208ENST00000584095 LINC00467Q9BRT7 94 aa2.56□□□□□ -2
TTC39C-208ENST00000584095 A0A0C4DFX4 3053 aa2.55□□□□□ -2
TTC39C-208ENST00000584095 ODF3BA8MYP8 253 aa2.55□□□□□ -2
TTC39C-208ENST00000584095 H3BUA1 57 aa2.55□□□□□ -2
TTC39C-208ENST00000584095 PRB4P10163 310 aaPredicted RBP2.55□□□□□ -2
TTC39C-208ENST00000584095 KRTAP13-1Q8IUC0 172 aa2.55□□□□□ -2
TTC39C-208ENST00000584095 USMG5Q96IX5 58 aa2.55□□□□□ -2
TTC39C-208ENST00000584095 RETNLBQ9BQ08 111 aa2.55□□□□□ -2
TTC39C-208ENST00000584095 WFDC10AQ9H1F0 79 aa2.55□□□□□ -2
TTC39C-208ENST00000584095 KCNQ1DNQ9H478 68 aa2.55□□□□□ -2
TTC39C-208ENST00000584095 F5P12259 2224 aa2.54□□□□□ -2
TTC39C-208ENST00000584095 CADP27708 2225 aa2.54□□□□□ -2
TTC39C-208ENST00000584095 MUC4Q99102 2169 aa2.54□□□□□ -2
TTC39C-208ENST00000584095 A0A096LNT2 108 aa2.54□□□□□ -2
TTC39C-208ENST00000584095 LCE1CQ5T751 118 aa2.54□□□□□ -2
TTC39C-208ENST00000584095 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
TTC39C-208ENST00000584095 PLAC8Q9NZF1 115 aa2.54□□□□□ -2
TTC39C-208ENST00000584095 PLCE1Q9P212 2302 aa2.53□□□□□ -2
TTC39C-208ENST00000584095 KRTAP5-8O75690 187 aa2.53□□□□□ -2
TTC39C-208ENST00000584095 Q8IZM0 81 aa2.53□□□□□ -2
TTC39C-208ENST00000584095 CNEP1R1Q8N9A8 125 aa2.53□□□□□ -2
TTC39C-208ENST00000584095 SPAG11BQ08648 103 aa2.52□□□□□ -2.01
TTC39C-208ENST00000584095 DEFB104AQ8WTQ1 72 aa2.52□□□□□ -2.01
TTC39C-208ENST00000584095 RHPN1-AS1Q9BWJ2 59 aa2.52□□□□□ -2.01
TTC39C-208ENST00000584095 XAGE1AQ9HD64 81 aa2.52□□□□□ -2.01
TTC39C-208ENST00000584095 A8MTW9 85 aa2.51□□□□□ -2.01
TTC39C-208ENST00000584095 M0R2N4 97 aa2.51□□□□□ -2.01
TTC39C-208ENST00000584095 Q6ZQY7 126 aa2.51□□□□□ -2.01
TTC39C-208ENST00000584095 TOMM7Q9P0U1 55 aa2.51□□□□□ -2.01
TTC39C-208ENST00000584095 PSORS1C2Q9UIG4 136 aa2.51□□□□□ -2.01
TTC39C-208ENST00000584095 FDCSPQ8NFU4 85 aa2.5□□□□□ -2.01
TTC39C-208ENST00000584095 DNAJC13O75165 2243 aa2.5□□□□□ -2.01
TTC39C-208ENST00000584095 KIAA0100Q14667 2235 aaKnown RBP2.49□□□□□ -2.01
TTC39C-208ENST00000584095 IGLV5-48A0A075B6I7 105 aa2.49□□□□□ -2.01
TTC39C-208ENST00000584095 COA5Q86WW8 74 aa2.49□□□□□ -2.01
TTC39C-208ENST00000584095 U3KQA8 63 aa2.49□□□□□ -2.01
TTC39C-208ENST00000584095 KNL1Q8NG31 2342 aa2.49□□□□□ -2.01
TTC39C-208ENST00000584095 WNK2Q9Y3S1 2297 aa2.49□□□□□ -2.01
TTC39C-208ENST00000584095 TRGV4A0A0C4DH28 118 aa2.48□□□□□ -2.01
TTC39C-208ENST00000584095 H0Y9P7 68 aa2.48□□□□□ -2.01
TTC39C-208ENST00000584095 SPAG11AQ6PDA7 123 aa2.48□□□□□ -2.01
TTC39C-208ENST00000584095 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
TTC39C-208ENST00000584095 PTPRQQ9UMZ3 2332 aa2.48□□□□□ -2.01
TTC39C-208ENST00000584095 SPRR4Q96PI1 79 aa2.47□□□□□ -2.01
TTC39C-208ENST00000584095 ASXL3Q9C0F0 2248 aa2.47□□□□□ -2.01
TTC39C-208ENST00000584095 HIVEP2P31629 2446 aa2.46□□□□□ -2.02
TTC39C-208ENST00000584095 URB1O60287 2271 aaKnown RBP2.46□□□□□ -2.02
TTC39C-208ENST00000584095 DEFB131BA0A096LNP1 70 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms