RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 HERV-K104P63124 156 aa7.34□□□□□ -1.23
NUP85-224ENST00000583948 SRSF9Q13242 221 aaKnown RBP eCLIP7.34□□□□□ -1.231e-9■■■■■ 31.2
NUP85-224ENST00000583948 SNHG12Q9BXW3 62 aa7.34□□□□□ -1.23
NUP85-224ENST00000583948 K7EP13 123 aa7.33□□□□□ -1.24
NUP85-224ENST00000583948 HIGD2BQ4VC39 106 aa7.33□□□□□ -1.24
NUP85-224ENST00000583948 BVES-AS1Q5T3Y7 98 aa7.33□□□□□ -1.24
NUP85-224ENST00000583948 A0A0U1RRA0 63 aa7.32□□□□□ -1.24
NUP85-224ENST00000583948 CIRBPQ14011 172 aaKnown RBP7.32□□□□□ -1.24
NUP85-224ENST00000583948 TAL2Q16559 108 aa7.32□□□□□ -1.24
NUP85-224ENST00000583948 C2orf82Q6UX34 121 aa7.32□□□□□ -1.24
NUP85-224ENST00000583948 CEND1Q8N111 149 aa7.32□□□□□ -1.24
NUP85-224ENST00000583948 LINC00526Q96FQ7 95 aa7.32□□□□□ -1.24
NUP85-224ENST00000583948 SPANXB1Q9NS25 103 aaPredicted RBP7.32□□□□□ -1.24
NUP85-224ENST00000583948 SMIM13P0DJ93 91 aa7.31□□□□□ -1.24
NUP85-224ENST00000583948 CXCL5P42830 114 aa7.31□□□□□ -1.24
NUP85-224ENST00000583948 PTTG1IPP53801 180 aa7.31□□□□□ -1.24
NUP85-224ENST00000583948 KIAA0087Q14695 138 aa7.31□□□□□ -1.24
NUP85-224ENST00000583948 SFTA2Q6UW10 78 aa7.31□□□□□ -1.24
NUP85-224ENST00000583948 ZNF561-AS1K7EIQ3 104 aa7.3□□□□□ -1.24
NUP85-224ENST00000583948 TIMM17BO60830 172 aa7.3□□□□□ -1.24
NUP85-224ENST00000583948 FXYD2P54710 66 aa7.3□□□□□ -1.24
NUP85-224ENST00000583948 NPC2P61916 151 aa7.3□□□□□ -1.24
NUP85-224ENST00000583948 DAND5Q8N907 189 aa7.3□□□□□ -1.24
NUP85-224ENST00000583948 C15orf56Q8N910 161 aa7.3□□□□□ -1.24
NUP85-224ENST00000583948 LITAFQ99732 161 aa7.3□□□□□ -1.24
NUP85-224ENST00000583948 TM2D2Q9BX73 214 aa7.3□□□□□ -1.24
NUP85-224ENST00000583948 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
NUP85-224ENST00000583948 PFN2P35080 140 aa7.29□□□□□ -1.24
NUP85-224ENST00000583948 LINC00158P58513 81 aa7.29□□□□□ -1.24
NUP85-224ENST00000583948 ADAMTSL4-AS1Q5T5F5 129 aa7.29□□□□□ -1.24
NUP85-224ENST00000583948 Q6ZRU5 148 aa7.29□□□□□ -1.24
NUP85-224ENST00000583948 SPANXDQ9BXN6 97 aa7.29□□□□□ -1.24
NUP85-224ENST00000583948 SPANXCQ9NY87 97 aa7.29□□□□□ -1.24
NUP85-224ENST00000583948 COX11Q9Y6N1 276 aa7.29□□□□□ -1.24
NUP85-224ENST00000583948 USP17L23D6RBM5 183 aa7.28□□□□□ -1.24
NUP85-224ENST00000583948 UNQ6190/PRO20217Q6UXQ8 127 aa7.28□□□□□ -1.24
NUP85-224ENST00000583948 CAMK2N2Q96S95 79 aa7.28□□□□□ -1.24
NUP85-224ENST00000583948 ERG28Q9UKR5 140 aa7.28□□□□□ -1.24
NUP85-224ENST00000583948 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
NUP85-224ENST00000583948 A6NDN8 102 aa7.27□□□□□ -1.25
NUP85-224ENST00000583948 A6NJY4 79 aa7.27□□□□□ -1.25
NUP85-224ENST00000583948 COL5A1-AS1Q5SY13 56 aa7.27□□□□□ -1.25
NUP85-224ENST00000583948 C10orf25Q5T742 122 aa7.27□□□□□ -1.25
NUP85-224ENST00000583948 MUSTN1Q8IVN3 82 aa7.27□□□□□ -1.25
NUP85-224ENST00000583948 NHP2Q9NX24 153 aaKnown RBP7.27□□□□□ -1.25
NUP85-224ENST00000583948 GVQW2A0A096LPI5 108 aaPredicted RBP7.26□□□□□ -1.25
NUP85-224ENST00000583948 RPL24P83731 157 aaKnown RBP7.26□□□□□ -1.25
NUP85-224ENST00000583948 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
NUP85-224ENST00000583948 Q6ZVH6 145 aa7.26□□□□□ -1.25
NUP85-224ENST00000583948 MIR7-3HGQ8N6C7 128 aa7.26□□□□□ -1.25
NUP85-224ENST00000583948 K7ERJ3 54 aa7.25□□□□□ -1.25
NUP85-224ENST00000583948 IFITM1P13164 125 aa7.25□□□□□ -1.25
NUP85-224ENST00000583948 C2orf48Q96LS8 159 aa7.25□□□□□ -1.25
NUP85-224ENST00000583948 A4D1N5 150 aa7.24□□□□□ -1.25
NUP85-224ENST00000583948 LBHQ53QV2 105 aaPredicted RBP7.24□□□□□ -1.25
NUP85-224ENST00000583948 LINC00308Q8TCZ7 52 aa7.24□□□□□ -1.25
NUP85-224ENST00000583948 COPS9Q8WXC6 57 aa7.24□□□□□ -1.25
NUP85-224ENST00000583948 C6orf48Q9UBA6 75 aa7.24□□□□□ -1.25
NUP85-224ENST00000583948 SYCNQ0VAF6 134 aa7.23□□□□□ -1.25
NUP85-224ENST00000583948 SOSTDC1Q6X4U4 206 aa7.23□□□□□ -1.25
NUP85-224ENST00000583948 RAB37Q96AX2 223 aa7.23□□□□□ -1.25
NUP85-224ENST00000583948 CARD19Q96LW7 228 aa7.23□□□□□ -1.25
NUP85-224ENST00000583948 TRBV30A0A0K0K1B3 111 aa7.22□□□□□ -1.25
NUP85-224ENST00000583948 F8WDY8 70 aa7.22□□□□□ -1.25
NUP85-224ENST00000583948 EIF4EBP3O60516 100 aaPredicted RBP7.22□□□□□ -1.25
NUP85-224ENST00000583948 COX17Q14061 63 aa7.22□□□□□ -1.25
NUP85-224ENST00000583948 LINC01600Q96MT4 127 aa7.22□□□□□ -1.25
NUP85-224ENST00000583948 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.21□□□□□ -1.26
NUP85-224ENST00000583948 TAX1BP3O14907 124 aa7.2□□□□□ -1.26
NUP85-224ENST00000583948 CFC1BP0CG36 223 aa7.2□□□□□ -1.26
NUP85-224ENST00000583948 CFC1P0CG37 223 aa7.2□□□□□ -1.26
NUP85-224ENST00000583948 KRTAP10-8P60410 259 aa7.2□□□□□ -1.26
NUP85-224ENST00000583948 C14orf177Q52M58 125 aa7.2□□□□□ -1.26
NUP85-224ENST00000583948 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
NUP85-224ENST00000583948 A0A1B0GWB2 263 aa7.19□□□□□ -1.26
NUP85-224ENST00000583948 CHTF8P0CG12 524 aa7.19□□□□□ -1.26
NUP85-224ENST00000583948 SND1-IT1Q9HBX3 110 aa7.19□□□□□ -1.26
NUP85-224ENST00000583948 FSIP2Q5CZC0 6907 aa7.19□□□□□ -1.26
NUP85-224ENST00000583948 A0A0B4J2C4 111 aa7.18□□□□□ -1.26
NUP85-224ENST00000583948 NAA38Q9BRA0 125 aaKnown RBP7.18□□□□□ -1.26
NUP85-224ENST00000583948 A0A1B0GV90 55 aa7.17□□□□□ -1.26
NUP85-224ENST00000583948 H7C2G1 150 aa7.17□□□□□ -1.26
NUP85-224ENST00000583948 SLPIP03973 132 aa7.17□□□□□ -1.26
NUP85-224ENST00000583948 RPL18AQ02543 176 aaKnown RBP7.17□□□□□ -1.26
NUP85-224ENST00000583948 GAGE2EQ4V326 116 aa7.17□□□□□ -1.26
NUP85-224ENST00000583948 PPDPFQ9H3Y8 114 aa7.17□□□□□ -1.26
NUP85-224ENST00000583948 GAGE2DQ9UEU5 116 aa7.17□□□□□ -1.26
NUP85-224ENST00000583948 PRO1854Q9UHT4 67 aa7.17□□□□□ -1.26
NUP85-224ENST00000583948 C9orf118A6NHY6 69 aa7.16□□□□□ -1.26
NUP85-224ENST00000583948 NDUFC2-KCTD14E9PQ53 114 aa7.16□□□□□ -1.26
NUP85-224ENST00000583948 RPL13AP40429 203 aaKnown RBP7.16□□□□□ -1.26
NUP85-224ENST00000583948 Q1RN00 199 aa7.16□□□□□ -1.26
NUP85-224ENST00000583948 RNF151Q2KHN1 245 aa7.16□□□□□ -1.26
NUP85-224ENST00000583948 SDIM1Q6ZPB5 146 aa7.16□□□□□ -1.26
NUP85-224ENST00000583948 XAGE1AQ9HD64 81 aa7.16□□□□□ -1.26
NUP85-224ENST00000583948 H3BUT2 72 aa7.15□□□□□ -1.26
NUP85-224ENST00000583948 NCR3O14931 201 aa7.14□□□□□ -1.27
NUP85-224ENST00000583948 TSPAN13O95857 204 aa7.14□□□□□ -1.27
NUP85-224ENST00000583948 Q6ZRP5 223 aa7.14□□□□□ -1.27
NUP85-224ENST00000583948 A0A087WYN8 130 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms