RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 VPS25Q9BRG1 176 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 OSTCQ9NRP0 149 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 TRBV30A0A0K0K1B3 111 aa4.24□□□□□ -1.73
CDK5RAP3-221ENST00000581662 SMIM27A0A1W2PRY6 76 aa4.24□□□□□ -1.73
CDK5RAP3-221ENST00000581662 A4D1N5 150 aa4.24□□□□□ -1.73
CDK5RAP3-221ENST00000581662 VCYO14598 125 aa4.24□□□□□ -1.73
CDK5RAP3-221ENST00000581662 SNRPEP62304 92 aaKnown RBP4.24□□□□□ -1.73
CDK5RAP3-221ENST00000581662 CTDSP1Q9GZU7 261 aa4.24□□□□□ -1.73
CDK5RAP3-221ENST00000581662 C22orf24Q9Y442 160 aa4.24□□□□□ -1.73
CDK5RAP3-221ENST00000581662 TNFRSF6BO95407 300 aa4.23□□□□□ -1.73
CDK5RAP3-221ENST00000581662 MT-ND4LP03901 98 aa4.23□□□□□ -1.73
CDK5RAP3-221ENST00000581662 FABP9Q0Z7S8 132 aa4.23□□□□□ -1.73
CDK5RAP3-221ENST00000581662 PEA15Q15121 130 aa4.23□□□□□ -1.73
CDK5RAP3-221ENST00000581662 AMELXQ99217 191 aa4.23□□□□□ -1.73
CDK5RAP3-221ENST00000581662 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
CDK5RAP3-221ENST00000581662 SMCO4Q9NRQ5 59 aa4.23□□□□□ -1.73
CDK5RAP3-221ENST00000581662 ZNF727A8MUV8 499 aa4.22□□□□□ -1.73
CDK5RAP3-221ENST00000581662 D6R8Y8 96 aa4.22□□□□□ -1.73
CDK5RAP3-221ENST00000581662 RPL23P62829 140 aaKnown RBP4.22□□□□□ -1.73
CDK5RAP3-221ENST00000581662 FAM74A3Q4VXF1 159 aa4.22□□□□□ -1.73
CDK5RAP3-221ENST00000581662 ALKAL2Q6UX46 152 aa4.22□□□□□ -1.73
CDK5RAP3-221ENST00000581662 C3orf22Q8N5N4 141 aa4.22□□□□□ -1.73
CDK5RAP3-221ENST00000581662 C20orf78Q9BR46 151 aa4.22□□□□□ -1.73
CDK5RAP3-221ENST00000581662 LINC00846Q9NV44 126 aa4.22□□□□□ -1.73
CDK5RAP3-221ENST00000581662 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
CDK5RAP3-221ENST00000581662 FCER1GP30273 86 aa4.21□□□□□ -1.74
CDK5RAP3-221ENST00000581662 VAMP3Q15836 100 aa4.21□□□□□ -1.74
CDK5RAP3-221ENST00000581662 TMEM241Q24JQ0 296 aa4.21□□□□□ -1.74
CDK5RAP3-221ENST00000581662 LINC00167Q96N53 147 aa4.21□□□□□ -1.74
CDK5RAP3-221ENST00000581662 SMIM7Q9BQ49 75 aa4.21□□□□□ -1.74
CDK5RAP3-221ENST00000581662 TP73-AS1Q9UF72 201 aa4.21□□□□□ -1.74
CDK5RAP3-221ENST00000581662 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
CDK5RAP3-221ENST00000581662 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 TGIF2-C20orf24A0A0A6YYL0 155 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 IGIPA6NJ69 53 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 NUPR1O60356 82 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 BCE1O60756 84 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 UBE2BP63146 152 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 HBBP68871 147 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 COX19Q49B96 90 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 COL5A1-AS1Q5SY13 56 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 LINC01561Q8N1V8 128 aa4.2□□□□□ -1.74
CDK5RAP3-221ENST00000581662 SMIM1B2RUZ4 78 aa4.19□□□□□ -1.74
CDK5RAP3-221ENST00000581662 PPP1R2P9O14990 202 aa4.19□□□□□ -1.74
CDK5RAP3-221ENST00000581662 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
CDK5RAP3-221ENST00000581662 MRPL55Q7Z7F7 128 aaKnown RBP4.19□□□□□ -1.74
CDK5RAP3-221ENST00000581662 KIR2DL4Q99706 377 aa4.19□□□□□ -1.74
CDK5RAP3-221ENST00000581662 SEC11CQ9BY50 192 aa4.19□□□□□ -1.74
CDK5RAP3-221ENST00000581662 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
CDK5RAP3-221ENST00000581662 EIF5A2Q9GZV4 153 aaKnown RBP4.19□□□□□ -1.74
CDK5RAP3-221ENST00000581662 RPL37AP8A6NKH3 93 aa4.18□□□□□ -1.74
CDK5RAP3-221ENST00000581662 FAM229BQ4G0N7 80 aa4.18□□□□□ -1.74
CDK5RAP3-221ENST00000581662 C5orf47Q569G3 176 aa4.18□□□□□ -1.74
CDK5RAP3-221ENST00000581662 C10orf91Q5T1B1 145 aa4.18□□□□□ -1.74
CDK5RAP3-221ENST00000581662 C2orf66Q6UXQ4 117 aa4.18□□□□□ -1.74
CDK5RAP3-221ENST00000581662 Q8IZM0 81 aa4.18□□□□□ -1.74
CDK5RAP3-221ENST00000581662 ALKBH7Q9BT30 221 aaPredicted RBP4.18□□□□□ -1.74
CDK5RAP3-221ENST00000581662 CDKN2A-AS1Q9UH64 79 aa4.18□□□□□ -1.74
CDK5RAP3-221ENST00000581662 IGLV8-61A0A075B6I0 122 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 IGLV5-45A0A087WSX0 123 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 PRLHP81277 87 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 RIGQ13278 110 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 UBE2V1Q13404 147 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 PYY3Q5JQD4 70 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 TMEM141Q96I45 108 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 SPANXCQ9NY87 97 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 NAT8BQ9UHF3 227 aa4.17□□□□□ -1.74
CDK5RAP3-221ENST00000581662 A0A1B0GW15 77 aa4.16□□□□□ -1.74
CDK5RAP3-221ENST00000581662 VPREB1P12018 145 aa4.16□□□□□ -1.74
CDK5RAP3-221ENST00000581662 PNRC1Q12796 327 aaPredicted RBP4.16□□□□□ -1.74
CDK5RAP3-221ENST00000581662 MRPL54Q6P161 138 aaKnown RBP4.16□□□□□ -1.74
CDK5RAP3-221ENST00000581662 GAGE10A6NGK3 116 aa4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 COLCA2A8K830 154 aa4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 M0R378 163 aa4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 PPP1R17O96001 155 aa4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 CKS2P33552 79 aa4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 JOSD1Q15040 202 aaPredicted RBP4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 RHEBQ15382 184 aa4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 TMEM18Q96B42 140 aa4.15□□□□□ -1.75
CDK5RAP3-221ENST00000581662 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
CDK5RAP3-221ENST00000581662 F8VRH5 84 aa4.14□□□□□ -1.75
CDK5RAP3-221ENST00000581662 RPL28P46779 137 aaKnown RBP4.14□□□□□ -1.75
CDK5RAP3-221ENST00000581662 OCIAD2Q56VL3 154 aa4.14□□□□□ -1.75
CDK5RAP3-221ENST00000581662 PCOTHQ58A44 107 aa4.14□□□□□ -1.75
CDK5RAP3-221ENST00000581662 PLEKHB2Q96CS7 222 aa4.14□□□□□ -1.75
CDK5RAP3-221ENST00000581662 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
CDK5RAP3-221ENST00000581662 GEMIN7Q9H840 131 aaKnown RBP4.14□□□□□ -1.75
CDK5RAP3-221ENST00000581662 MT2AP02795 61 aa4.13□□□□□ -1.75
CDK5RAP3-221ENST00000581662 ADCYAP1P18509 176 aa4.13□□□□□ -1.75
CDK5RAP3-221ENST00000581662 RAB5AP20339 215 aa4.13□□□□□ -1.75
CDK5RAP3-221ENST00000581662 IFI27P40305 119 aaPredicted RBP4.13□□□□□ -1.75
CDK5RAP3-221ENST00000581662 ADIRFQ15847 76 aa4.13□□□□□ -1.75
CDK5RAP3-221ENST00000581662 BORCS7Q96B45 105 aa4.13□□□□□ -1.75
CDK5RAP3-221ENST00000581662 PRELID3AQ96N28 172 aa4.13□□□□□ -1.75
CDK5RAP3-221ENST00000581662 IGKV2-28A0A075B6P5 120 aa4.12□□□□□ -1.75
CDK5RAP3-221ENST00000581662 IGKV2D-28P01615 120 aa4.12□□□□□ -1.75
CDK5RAP3-221ENST00000581662 Q6ZN92 141 aa4.12□□□□□ -1.75
CDK5RAP3-221ENST00000581662 TEX43Q6ZNM6 134 aa4.12□□□□□ -1.75
CDK5RAP3-221ENST00000581662 ORMDL3Q8N138 153 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms