RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 UBE2BP63146 152 aa5.88□□□□□ -1.47
TOP3A-211ENST00000581536 BAGE3Q86Y29 109 aa5.88□□□□□ -1.47
TOP3A-211ENST00000581536 CBLN2Q8IUK8 224 aa5.88□□□□□ -1.47
TOP3A-211ENST00000581536 IGLV5-39A0A0G2JS06 123 aa5.86□□□□□ -1.47
TOP3A-211ENST00000581536 C11orf86A6NJI1 115 aa5.86□□□□□ -1.47
TOP3A-211ENST00000581536 RPL37AP8A6NKH3 93 aa5.86□□□□□ -1.47
TOP3A-211ENST00000581536 CXCL5P42830 114 aa5.86□□□□□ -1.47
TOP3A-211ENST00000581536 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
TOP3A-211ENST00000581536 H3BRM9 83 aa5.85□□□□□ -1.47
TOP3A-211ENST00000581536 ATP5LO75964 103 aa5.85□□□□□ -1.47
TOP3A-211ENST00000581536 PFN2P35080 140 aa5.85□□□□□ -1.47
TOP3A-211ENST00000581536 LINC00518Q8N0U6 118 aa5.85□□□□□ -1.47
TOP3A-211ENST00000581536 FAM19A2Q8N3H0 131 aa5.85□□□□□ -1.47
TOP3A-211ENST00000581536 ZNF625Q96I27 306 aaPredicted RBP5.85□□□□□ -1.47
TOP3A-211ENST00000581536 LINC00167Q96N53 147 aa5.85□□□□□ -1.47
TOP3A-211ENST00000581536 CHTOPQ9Y3Y2 248 aaKnown RBP5.85□□□□□ -1.47
TOP3A-211ENST00000581536 GAGE10A6NGK3 116 aa5.84□□□□□ -1.47
TOP3A-211ENST00000581536 H0Y9J4 135 aa5.84□□□□□ -1.47
TOP3A-211ENST00000581536 TRGC2P03986 189 aa5.84□□□□□ -1.47
TOP3A-211ENST00000581536 S100A12P80511 92 aa5.84□□□□□ -1.47
TOP3A-211ENST00000581536 TMEM170BQ5T4T1 132 aa5.84□□□□□ -1.47
TOP3A-211ENST00000581536 MRPL55Q7Z7F7 128 aaKnown RBP5.84□□□□□ -1.47
TOP3A-211ENST00000581536 DIRC1Q969H9 104 aa5.84□□□□□ -1.47
TOP3A-211ENST00000581536 NUPR1O60356 82 aa5.83□□□□□ -1.48
TOP3A-211ENST00000581536 KRTAP1-4P0C5Y4 121 aa5.83□□□□□ -1.48
TOP3A-211ENST00000581536 LBHQ53QV2 105 aaPredicted RBP5.83□□□□□ -1.48
TOP3A-211ENST00000581536 IFI27L1Q96BM0 104 aa5.83□□□□□ -1.48
TOP3A-211ENST00000581536 CHCHD1Q96BP2 118 aaKnown RBP5.83□□□□□ -1.48
TOP3A-211ENST00000581536 LPAP08519 4548 aa5.83□□□□□ -1.48
TOP3A-211ENST00000581536 LRP2P98164 4655 aa5.83□□□□□ -1.48
TOP3A-211ENST00000581536 Q8NDZ9 215 aa5.82□□□□□ -1.48
TOP3A-211ENST00000581536 TMEM223A0PJW6 202 aa5.81□□□□□ -1.48
TOP3A-211ENST00000581536 COLCA2A8K830 154 aa5.81□□□□□ -1.48
TOP3A-211ENST00000581536 ZNF861PO60384 105 aa5.81□□□□□ -1.48
TOP3A-211ENST00000581536 TP73-AS1Q9UF72 201 aa5.81□□□□□ -1.48
TOP3A-211ENST00000581536 ERG28Q9UKR5 140 aa5.81□□□□□ -1.48
TOP3A-211ENST00000581536 TRAV12-1A0A0B4J245 112 aa5.8□□□□□ -1.48
TOP3A-211ENST00000581536 A0A0U1RRA0 63 aa5.8□□□□□ -1.48
TOP3A-211ENST00000581536 SMIM6P0DI80 62 aa5.8□□□□□ -1.48
TOP3A-211ENST00000581536 AKR1D1P51857 326 aa5.8□□□□□ -1.48
TOP3A-211ENST00000581536 SND1-IT1Q9HBX3 110 aa5.8□□□□□ -1.48
TOP3A-211ENST00000581536 RNF213Q63HN8 5207 aa5.79□□□□□ -1.48
TOP3A-211ENST00000581536 IGLV5-37A0A075B6J1 123 aa5.79□□□□□ -1.48
TOP3A-211ENST00000581536 H0Y8G0 127 aa5.79□□□□□ -1.48
TOP3A-211ENST00000581536 HSBP1O75506 76 aa5.79□□□□□ -1.48
TOP3A-211ENST00000581536 SERF1AO75920 110 aa5.79□□□□□ -1.48
TOP3A-211ENST00000581536 C12orf57Q99622 126 aa5.79□□□□□ -1.48
TOP3A-211ENST00000581536 IGKV2-28A0A075B6P5 120 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 BCE1O60756 84 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 IGKV2D-28P01615 120 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 S100A6P06703 90 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 VPREB1P12018 145 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 FABP4P15090 132 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 CTAG1AP78358 180 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 NKAPP1Q8N9T2 125 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 ANAPC11Q9NYG5 84 aa5.78□□□□□ -1.48
TOP3A-211ENST00000581536 LINC00158P58513 81 aa5.77□□□□□ -1.49
TOP3A-211ENST00000581536 COX17Q14061 63 aa5.77□□□□□ -1.49
TOP3A-211ENST00000581536 IGLV1-50A0A075B6I6 118 aa5.76□□□□□ -1.49
TOP3A-211ENST00000581536 TMEM238C9JI98 176 aa5.76□□□□□ -1.49
TOP3A-211ENST00000581536 LEPROTL1O95214 131 aa5.76□□□□□ -1.49
TOP3A-211ENST00000581536 SMIM13P0DJ93 91 aa5.76□□□□□ -1.49
TOP3A-211ENST00000581536 PMCHL2Q9BQD1 86 aa5.76□□□□□ -1.49
TOP3A-211ENST00000581536 A0A087X002 238 aa5.75□□□□□ -1.49
TOP3A-211ENST00000581536 PCP4L1A6NKN8 68 aa5.75□□□□□ -1.49
TOP3A-211ENST00000581536 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
TOP3A-211ENST00000581536 C5orf52A6NGY3 159 aa5.74□□□□□ -1.49
TOP3A-211ENST00000581536 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
TOP3A-211ENST00000581536 TSPEAR-AS2P59090 65 aa5.74□□□□□ -1.49
TOP3A-211ENST00000581536 RPL24P83731 157 aaKnown RBP5.74□□□□□ -1.49
TOP3A-211ENST00000581536 M0R378 163 aa5.73□□□□□ -1.49
TOP3A-211ENST00000581536 UBE2AP49459 152 aa5.73□□□□□ -1.49
TOP3A-211ENST00000581536 PRLHP81277 87 aa5.73□□□□□ -1.49
TOP3A-211ENST00000581536 TMEM126AQ9H061 195 aa5.73□□□□□ -1.49
TOP3A-211ENST00000581536 LEPROTO15243 131 aa5.72□□□□□ -1.49
TOP3A-211ENST00000581536 TSPAN13O95857 204 aa5.72□□□□□ -1.49
TOP3A-211ENST00000581536 SNRPEP62304 92 aaKnown RBP5.72□□□□□ -1.49
TOP3A-211ENST00000581536 MEIG1Q5JSS6 88 aa5.72□□□□□ -1.49
TOP3A-211ENST00000581536 SFTA2Q6UW10 78 aa5.72□□□□□ -1.49
TOP3A-211ENST00000581536 FAM19A1Q7Z5A9 133 aa5.72□□□□□ -1.49
TOP3A-211ENST00000581536 MIR7-3HGQ8N6C7 128 aa5.72□□□□□ -1.49
TOP3A-211ENST00000581536 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
TOP3A-211ENST00000581536 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.5
TOP3A-211ENST00000581536 DAND5Q8N907 189 aa5.71□□□□□ -1.5
TOP3A-211ENST00000581536 HSPB8Q9UJY1 196 aa5.71□□□□□ -1.5
TOP3A-211ENST00000581536 MYMXA0A1B0GTQ4 84 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 NCR3O14931 201 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 HIST1H2BKO60814 126 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 DPM2O94777 84 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 IGKCP01834 107 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 HIST1H2BJP06899 126 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 HIST1H2BOP23527 126 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 S100A2P29034 98 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 HIST1H2BBP33778 126 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
TOP3A-211ENST00000581536 HIST1H2BDP58876 126 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 HIST1H2BCP62807 126 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 HIST2H2BEQ16778 126 aa5.7□□□□□ -1.5
TOP3A-211ENST00000581536 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.7□□□□□ -1.5
TOP3A-211ENST00000581536 BOD1L2Q8IYS8 172 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms