RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 IGHV3-73A0A0B4J1V6 119 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 A0A0B4J2C4 111 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 LOC107984156A0A0G2JMH3 177 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 C8orf87E5RJ46 101 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 TMEM262E9PQX1 116 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 K7EQD1 137 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 IGHV3-33P01772 117 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 TMEM170BQ5T4T1 132 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 Q6ZUT4 128 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 ARL17AQ8IVW1 177 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 C20orf203Q8NBC4 194 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 PYGO1Q9Y3Y4 419 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 TRGV2A0A075B6R0 118 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 A0A087WZ39 114 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 A0A096LPF7 62 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 A8MWV9 139 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 I3L3M4 83 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 M0R2P5 195 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 ATP5G1P05496 136 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 FHL2Q14192 279 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 FAM104AQ969W3 186 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 VSIG2Q96IQ7 327 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 DNAJC30Q96LL9 226 aa2.31□□□□□ -2.04
CDH19-204ENST00000579658 IGLV4-3A0A075B6K6 122 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.3□□□□□ -2.04
CDH19-204ENST00000579658 TRBV30A0A0K0K1B3 111 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 SPINK8P0C7L1 97 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 ZNF22P17026 224 aaPredicted RBP2.3□□□□□ -2.04
CDH19-204ENST00000579658 LGALS3P17931 250 aaKnown RBP2.3□□□□□ -2.04
CDH19-204ENST00000579658 MRPS36P82909 103 aaKnown RBP2.3□□□□□ -2.04
CDH19-204ENST00000579658 Q5XG85 94 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 SLC25A20O43772 301 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 MT-ATP8P03928 68 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 SCGB1C2P0DMR2 95 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 MUSTN1Q8IVN3 82 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 LITAFQ99732 161 aa2.3□□□□□ -2.04
CDH19-204ENST00000579658 A0A0J9YXY3 114 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 SFTA2Q6UW10 78 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 Q6ZVQ6 151 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 ANKRD29Q8N6D5 301 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 OPRPNQ99935 248 aaPredicted RBP2.29□□□□□ -2.04
CDH19-204ENST00000579658 TRAV4A0A0B4J268 109 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 TRGV4A0A0C4DH28 118 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 IGHV1-58A0A0C4DH39 117 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 A0A0J9YXV3 536 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 FAM236AA0A1B0GUQ0 79 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 FAM236BA0A1B0GV22 79 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 C9JAW5 83 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 IGHV3-30-3P0DP02 117 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 ZNF56Q15929 161 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 ESRGQ1W209 222 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 FAM74A4Q5TZK3 123 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 OR13C6PQ8NH95 151 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 SPANXDQ9BXN6 97 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 SPANXCQ9NY87 97 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 RBM12B-AS1Q9P1G2 102 aa2.29□□□□□ -2.04
CDH19-204ENST00000579658 IGLV9-49A0A0B4J1Y8 123 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 TRBV10-2A0A0K0K1G8 114 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 H3BNG1 76 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 TIMM17BO60830 172 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 KRTAP10-1P60331 282 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 PMAIP1Q13794 54 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 ATXN8Q156A1 80 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 Q6Q795 121 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 FAM19A3Q7Z5A8 133 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 LINC00588Q9Y4M8 146 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 SRRM2Q9UQ35 2752 aaKnown RBP2.28□□□□□ -2.04
CDH19-204ENST00000579658 SMR3BP02814 79 aaPredicted RBP2.28□□□□□ -2.04
CDH19-204ENST00000579658 IFITM1P13164 125 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 ADAMTSL4-AS1Q5T5F5 129 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 Q6ZRN7 208 aaPredicted RBP2.28□□□□□ -2.04
CDH19-204ENST00000579658 CHCHD7Q9BUK0 85 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 SPANXA1Q9NS26 97 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 PRO0255Q9UI72 69 aa2.28□□□□□ -2.04
CDH19-204ENST00000579658 IGLV5-45A0A087WSX0 123 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 IGLV5-52A0A0A0MRZ9 124 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 GAGE12JA6NER3 117 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 H3BT86 120 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 GAGE4Q13068 117 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 MIAQ16674 131 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 ANAPC13Q9BS18 74 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 TIMM21Q9BVV7 248 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 UBE2D4Q9Y2X8 147 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 PKHD1L1Q86WI1 4243 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 A0A087WTM6 91 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 TRAV8-3A0A0A6YYJ7 113 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 TEX49A0A1B0GTD5 131 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 H7C423 109 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 LST1O00453 97 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 COX6CP09669 75 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 LYPD5Q6UWN5 251 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 KRTAP1-5Q9BYS1 174 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 NDUFA12Q9UI09 145 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 ICOSQ9Y6W8 199 aa2.27□□□□□ -2.05
CDH19-204ENST00000579658 FLG2Q5D862 2391 aaPredicted RBP2.27□□□□□ -2.05
CDH19-204ENST00000579658 IGHV3-64A0A075B6Q5 118 aa2.26□□□□□ -2.05
CDH19-204ENST00000579658 IGHV3-38A0A0C4DH36 116 aa2.26□□□□□ -2.05
CDH19-204ENST00000579658 PRSS2P07478 247 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms