RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 LINC00474Q9P2X8 69 aa4.84□□□□□ -1.63
KRT39-203ENST00000578078 SONP18583 2426 aaKnown RBP4.84□□□□□ -1.63
KRT39-203ENST00000578078 IGKV2-29A2NJV5 120 aaPredicted RBP4.83□□□□□ -1.64
KRT39-203ENST00000578078 LECT2O14960 151 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 PROK1P58294 105 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 FAM74A4Q5TZK3 123 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 LINC00337Q8N6G1 96 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 TMEM254Q8TBM7 123 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 ANK3Q12955 4377 aaKnown RBP4.83□□□□□ -1.64
KRT39-203ENST00000578078 IGKV2-28A0A075B6P5 120 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 NCR3O14931 201 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 INSP01308 110 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 IGKV2D-28P01615 120 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 LINC01547P58512 204 aaPredicted RBP4.83□□□□□ -1.64
KRT39-203ENST00000578078 C9orf129Q5T035 196 aaKnown RBP4.83□□□□□ -1.64
KRT39-203ENST00000578078 LINC00242Q5T6M2 205 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 RMI2Q96E14 147 aa4.83□□□□□ -1.64
KRT39-203ENST00000578078 NF1P21359 2839 aa4.82□□□□□ -1.64
KRT39-203ENST00000578078 CMC4P56277 68 aaPredicted RBP4.82□□□□□ -1.64
KRT39-203ENST00000578078 TRBV6-4A0A1B0GX49 114 aa4.81□□□□□ -1.64
KRT39-203ENST00000578078 PAX4O43316 350 aa4.81□□□□□ -1.64
KRT39-203ENST00000578078 Q6ZQT0 140 aa4.81□□□□□ -1.64
KRT39-203ENST00000578078 HTN1P15515 57 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 FUSP35637 526 aaKnown RBP eCLIP4.8□□□□□ -1.64
KRT39-203ENST00000578078 RPL36AP83881 106 aaKnown RBP4.8□□□□□ -1.64
KRT39-203ENST00000578078 C6orf223Q8N319 242 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 Q8N814 137 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 RPL36ALQ969Q0 106 aaKnown RBP4.8□□□□□ -1.64
KRT39-203ENST00000578078 SMR3AQ99954 134 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 TM2D3Q9BRN9 247 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 LINC00467Q9BRT7 94 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 ACANP16112 2415 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 SORL1Q92673 2214 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 NDUFS5O43920 106 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 IGHV3-53P01767 116 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 DAD1P61803 113 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 NREPQ16612 68 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 Q6ZTC4 211 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 Q8N3U1 123 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 SNURFQ9Y675 71 aa4.8□□□□□ -1.64
KRT39-203ENST00000578078 WNK1Q9H4A3 2382 aa4.79□□□□□ -1.64
KRT39-203ENST00000578078 K7EQD1 137 aa4.79□□□□□ -1.64
KRT39-203ENST00000578078 MUC7Q8TAX7 377 aa4.79□□□□□ -1.64
KRT39-203ENST00000578078 HIVEP2P31629 2446 aa4.78□□□□□ -1.64
KRT39-203ENST00000578078 hDV103S1A0JD37 113 aa4.78□□□□□ -1.64
KRT39-203ENST00000578078 CYSRT1A8MQ03 144 aa4.78□□□□□ -1.64
KRT39-203ENST00000578078 IGLV1-51P01701 117 aa4.78□□□□□ -1.64
KRT39-203ENST00000578078 UBE2BP63146 152 aa4.78□□□□□ -1.64
KRT39-203ENST00000578078 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.78□□□□□ -1.64
KRT39-203ENST00000578078 HECTD1Q9ULT8 2610 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 TRBV10-1A0A0K0K1A3 114 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 LCE6AA0A183 80 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 C11orf72Q8NBR9 251 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 MTORP42345 2549 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 CUBNO60494 3623 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 TRAV10A0A0B4J240 114 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 IGHV3-38A0A0C4DH36 116 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 BPY2O14599 106 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 CCL18P55774 89 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 COX6A2Q02221 97 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 CYP4F30PQ9H0H9 118 aa4.77□□□□□ -1.65
KRT39-203ENST00000578078 OTOGQ6ZRI0 2925 aa4.76□□□□□ -1.65
KRT39-203ENST00000578078 A0A1B0GW54 56 aa4.76□□□□□ -1.65
KRT39-203ENST00000578078 NTM-AS1Q6ZSK4 140 aa4.76□□□□□ -1.65
KRT39-203ENST00000578078 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
KRT39-203ENST00000578078 WFDC9Q8NEX5 89 aa4.76□□□□□ -1.65
KRT39-203ENST00000578078 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
KRT39-203ENST00000578078 OCR1Q9BZK8 76 aa4.76□□□□□ -1.65
KRT39-203ENST00000578078 IGHV3-73A0A0B4J1V6 119 aa4.75□□□□□ -1.65
KRT39-203ENST00000578078 FAM229BQ4G0N7 80 aa4.75□□□□□ -1.65
KRT39-203ENST00000578078 CDC42SE2Q9NRR3 84 aa4.75□□□□□ -1.65
KRT39-203ENST00000578078 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.74□□□□□ -1.65
KRT39-203ENST00000578078 PRM2P04554 102 aa4.74□□□□□ -1.65
KRT39-203ENST00000578078 HAMPP81172 84 aa4.74□□□□□ -1.65
KRT39-203ENST00000578078 SETD2Q9BYW2 2564 aaPredicted RBP4.74□□□□□ -1.65
KRT39-203ENST00000578078 TRGV1A0A0A0MS02 117 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 LOC100131303A0A0U1RQF7 123 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 LINC00158P58513 81 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 KRTAP10-3P60369 221 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 COX17Q14061 63 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 RNASE13Q5GAN3 156 aaKnown RBP4.73□□□□□ -1.65
KRT39-203ENST00000578078 C16orf74Q96GX8 76 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 NSD1Q96L73 2696 aaPredicted RBP4.73□□□□□ -1.65
KRT39-203ENST00000578078 NDUFB1O75438 58 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 ATP11AUNQ6ZP68 121 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 Q6ZRP5 223 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 DEFB104AQ8WTQ1 72 aa4.73□□□□□ -1.65
KRT39-203ENST00000578078 UBE2AP49459 152 aa4.72□□□□□ -1.65
KRT39-203ENST00000578078 LINC00575Q6W349 94 aa4.72□□□□□ -1.65
KRT39-203ENST00000578078 SPATA3Q8NHX4 192 aa4.72□□□□□ -1.65
KRT39-203ENST00000578078 WFDC10AQ9H1F0 79 aa4.72□□□□□ -1.65
KRT39-203ENST00000578078 LINC00588Q9Y4M8 146 aa4.72□□□□□ -1.65
KRT39-203ENST00000578078 NIPBLQ6KC79 2804 aaeCLIP4.71□□□□□ -1.65
KRT39-203ENST00000578078 UBE2L6O14933 153 aa4.71□□□□□ -1.66
KRT39-203ENST00000578078 SLPIP03973 132 aa4.71□□□□□ -1.66
KRT39-203ENST00000578078 ELOF1P60002 83 aaKnown RBP4.71□□□□□ -1.66
KRT39-203ENST00000578078 LIMD2Q9BT23 127 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms